RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 KIAA1549LQ6ZVL6 1849 aa8.31□□□□□ -1.08
RIF1-211ENST00000494333 MEI4A8MW99 385 aa8.31□□□□□ -1.08
RIF1-211ENST00000494333 MOCS3O95396 460 aa8.31□□□□□ -1.08
RIF1-211ENST00000494333 DNTTP04053 509 aa8.31□□□□□ -1.08
RIF1-211ENST00000494333 ASLP04424 464 aa8.31□□□□□ -1.08
RIF1-211ENST00000494333 MMEP08473 750 aa8.31□□□□□ -1.08
RIF1-211ENST00000494333 GNSP15586 552 aa8.31□□□□□ -1.08
RIF1-211ENST00000494333 CDK11BP21127 795 aaKnown RBP8.31□□□□□ -1.08
RIF1-211ENST00000494333 ACSL1P33121 698 aa8.31□□□□□ -1.08
RIF1-211ENST00000494333 CDH5P33151 784 aaPredicted RBP8.31□□□□□ -1.08
RIF1-211ENST00000494333 CSKP41240 450 aa8.31□□□□□ -1.08
RIF1-211ENST00000494333 MATKP42679 507 aa8.31□□□□□ -1.08
RIF1-211ENST00000494333 NUMBP49757 651 aa8.31□□□□□ -1.08
RIF1-211ENST00000494333 KLK7P49862 253 aa8.31□□□□□ -1.08
RIF1-211ENST00000494333 KCNAB2Q13303 367 aa8.31□□□□□ -1.08
RIF1-211ENST00000494333 KRT31Q15323 416 aa8.31□□□□□ -1.08
RIF1-211ENST00000494333 C2CD6Q53TS8 623 aa8.31□□□□□ -1.08
RIF1-211ENST00000494333 PITRM1Q5JRX3 1037 aa8.31□□□□□ -1.08
RIF1-211ENST00000494333 FKBP15Q5T1M5 1219 aa8.31□□□□□ -1.08
RIF1-211ENST00000494333 FBXL22Q6P050 247 aa8.31□□□□□ -1.08
RIF1-211ENST00000494333 USP53Q70EK8 1073 aa8.31□□□□□ -1.08
RIF1-211ENST00000494333 RABEPKQ7Z6M1 372 aa8.31□□□□□ -1.08
RIF1-211ENST00000494333 NOP9Q86U38 636 aaKnown RBP8.31□□□□□ -1.08
RIF1-211ENST00000494333 ERICH1Q86X53 443 aa8.31□□□□□ -1.08
RIF1-211ENST00000494333 ZDHHC17Q8IUH5 632 aa8.31□□□□□ -1.08
RIF1-211ENST00000494333 APCDD1Q8J025 514 aa8.31□□□□□ -1.08
RIF1-211ENST00000494333 CCAR2Q8N163 923 aaKnown RBP8.31□□□□□ -1.08
RIF1-211ENST00000494333 RCBTB1Q8NDN9 531 aa8.31□□□□□ -1.08
RIF1-211ENST00000494333 ZNF397Q8NF99 534 aaPredicted RBP8.31□□□□□ -1.08
RIF1-211ENST00000494333 CADM4Q8NFZ8 388 aa8.31□□□□□ -1.08
RIF1-211ENST00000494333 PRMT1Q99873 361 aaKnown RBP8.31□□□□□ -1.08
RIF1-211ENST00000494333 SIK2Q9H0K1 926 aa8.31□□□□□ -1.08
RIF1-211ENST00000494333 WDCPQ9H6R7 721 aa8.31□□□□□ -1.08
RIF1-211ENST00000494333 FAM207AQ9NSI2 230 aaPredicted RBP8.31□□□□□ -1.08
RIF1-211ENST00000494333 ANO10Q9NW15 660 aa8.31□□□□□ -1.08
RIF1-211ENST00000494333 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.31□□□□□ -1.084e-7■□□□□ 8.2
RIF1-211ENST00000494333 SLCO3A1Q9UIG8 710 aa8.31□□□□□ -1.08
RIF1-211ENST00000494333 STAP1Q9ULZ2 295 aa8.31□□□□□ -1.08
RIF1-211ENST00000494333 ERVW-1Q9UQF0 538 aa8.31□□□□□ -1.08
RIF1-211ENST00000494333 FRYLO94915 3013 aa8.31□□□□□ -1.08
RIF1-211ENST00000494333 RALGAPA1Q6GYQ0 2036 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 TRBV23-1A0A0A0MS06 115 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 BLACEA4D250 179 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 TTC34A8MYJ7 566 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 F8VZ95 297 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 DAB1O75553 588 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 GFPT2O94808 682 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 IGLV3-19P01714 112 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 SRPRAP08240 638 aaKnown RBP8.3□□□□□ -1.08
RIF1-211ENST00000494333 ZNF18P17022 549 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 TACR1P25103 407 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 NNMTP40261 264 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 GABRB2P47870 512 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 SULT1E1P49888 294 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 NOVA1P51513 510 aaKnown RBP8.3□□□□□ -1.08
RIF1-211ENST00000494333 COPB1P53618 953 aaKnown RBP8.3□□□□□ -1.08
RIF1-211ENST00000494333 POLR2FP61218 127 aaKnown RBP8.3□□□□□ -1.08
RIF1-211ENST00000494333 RPS14P62263 151 aaKnown RBP8.3□□□□□ -1.08
RIF1-211ENST00000494333 ECT2LQ008S8 904 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 ZBTB16Q05516 673 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 DEUP1Q05D60 604 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 MTA1Q13330 715 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 STX1AQ16623 288 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 HNRNPA1L2Q32P51 320 aaKnown RBP8.3□□□□□ -1.08
RIF1-211ENST00000494333 PLEKHG6Q3KR16 790 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 RABGAP1LQ5R372 815 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 FAM102AQ5T9C2 384 aaPredicted RBP8.3□□□□□ -1.08
RIF1-211ENST00000494333 DCAF12L1Q5VU92 463 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 RNF219Q5W0B1 726 aaPredicted RBP8.3□□□□□ -1.08
RIF1-211ENST00000494333 CIR1Q86X95 450 aaPredicted RBP8.3□□□□□ -1.08
RIF1-211ENST00000494333 DHX40Q8IX18 779 aaKnown RBP8.3□□□□□ -1.08
RIF1-211ENST00000494333 KDM1BQ8NB78 822 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 ANKRD20A12PQ8NF67 263 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 OR2I1PQ8NGU4 316 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 CPA5Q8WXQ8 436 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 DNASE2BQ8WZ79 361 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 IGSF8Q969P0 613 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 RPL10LQ96L21 214 aaKnown RBP8.3□□□□□ -1.08
RIF1-211ENST00000494333 RPRD1AQ96P16 312 aaPredicted RBP8.3□□□□□ -1.08
RIF1-211ENST00000494333 SPAG5Q96R06 1193 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 NPY6RQ99463 290 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 BTBD1Q9H0C5 482 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 TKTL2Q9H0I9 626 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 GANQ9H2C0 597 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 NLRC4Q9NPP4 1024 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 PIGVQ9NUD9 493 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 RRN3Q9NYV6 651 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 EIF2B4Q9UI10 523 aaKnown RBP8.3□□□□□ -1.08
RIF1-211ENST00000494333 VANGL2Q9ULK5 521 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 NCKAP1Q9Y2A7 1128 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 NPFFR2Q9Y5X5 522 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 HS3ST4Q9Y661 456 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 THADAQ6YHU6 1953 aa8.3□□□□□ -1.08
RIF1-211ENST00000494333 DMXL1Q9Y485 3027 aa8.29□□□□□ -1.08
RIF1-211ENST00000494333 DNAH14Q0VDD8 3507 aa8.29□□□□□ -1.08
RIF1-211ENST00000494333 SPAG17Q6Q759 2223 aa8.29□□□□□ -1.08
RIF1-211ENST00000494333 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.29□□□□□ -1.08
RIF1-211ENST00000494333 A0A1B0GTW7 788 aa8.29□□□□□ -1.08
RIF1-211ENST00000494333 A0A1B0GVM2 712 aa8.29□□□□□ -1.08
RIF1-211ENST00000494333 TARSL2A2RTX5 802 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms