RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 CINPQ9BW66 212 aaPredicted RBP8.61□□□□□ -1.03
LRCH3-219ENST00000494069 PACSIN1Q9BY11 444 aa8.61□□□□□ -1.03
LRCH3-219ENST00000494069 XPO4Q9C0E2 1151 aaKnown RBP8.61□□□□□ -1.03
LRCH3-219ENST00000494069 PCDH18Q9HCL0 1135 aa8.61□□□□□ -1.03
LRCH3-219ENST00000494069 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.61□□□□□ -1.03
LRCH3-219ENST00000494069 ANAPC7Q9UJX3 599 aa8.61□□□□□ -1.03
LRCH3-219ENST00000494069 NENFQ9UMX5 172 aa8.61□□□□□ -1.03
LRCH3-219ENST00000494069 APC2O95996 2303 aa8.61□□□□□ -1.03
LRCH3-219ENST00000494069 EIF3CLB5ME19 914 aaKnown RBP8.6□□□□□ -1.03
LRCH3-219ENST00000494069 BHMG1C9JSJ3 638 aaPredicted RBP8.6□□□□□ -1.03
LRCH3-219ENST00000494069 H3BRJ5 948 aa8.6□□□□□ -1.03
LRCH3-219ENST00000494069 MAFKO60675 156 aa8.6□□□□□ -1.03
LRCH3-219ENST00000494069 PCCBP05166 539 aa8.6□□□□□ -1.03
LRCH3-219ENST00000494069 CKMT1AP12532 417 aa8.6□□□□□ -1.03
LRCH3-219ENST00000494069 GM2AP17900 193 aa8.6□□□□□ -1.03
LRCH3-219ENST00000494069 EIF4A3P38919 411 aaKnown RBP8.6□□□□□ -1.03
LRCH3-219ENST00000494069 MMP12P39900 470 aa8.6□□□□□ -1.03
LRCH3-219ENST00000494069 SSR1P43307 286 aaKnown RBP8.6□□□□□ -1.03
LRCH3-219ENST00000494069 CSNK1DP48730 415 aa8.6□□□□□ -1.03
LRCH3-219ENST00000494069 LIG3P49916 1009 aa8.6□□□□□ -1.03
LRCH3-219ENST00000494069 SCNN1BP51168 640 aa8.6□□□□□ -1.03
LRCH3-219ENST00000494069 HNRNPKP61978 463 aaKnown RBP eCLIP8.6□□□□□ -1.03
LRCH3-219ENST00000494069 RALGDSQ12967 914 aa8.6□□□□□ -1.03
LRCH3-219ENST00000494069 PIGHQ14442 188 aaPredicted RBP8.6□□□□□ -1.03
LRCH3-219ENST00000494069 LBRQ14739 615 aaKnown RBP8.6□□□□□ -1.03
LRCH3-219ENST00000494069 CDKN3Q16667 212 aa8.6□□□□□ -1.03
LRCH3-219ENST00000494069 BOLA3Q53S33 107 aa8.6□□□□□ -1.03
LRCH3-219ENST00000494069 FAM182AQ5T1J6 154 aa8.6□□□□□ -1.03
LRCH3-219ENST00000494069 ALKBH5Q6P6C2 394 aaKnown RBP8.6□□□□□ -1.03
LRCH3-219ENST00000494069 ZSCAN30Q86W11 494 aa8.6□□□□□ -1.03
LRCH3-219ENST00000494069 PELI3Q8N2H9 469 aa8.6□□□□□ -1.03
LRCH3-219ENST00000494069 NIPA2Q8N8Q9 360 aa8.6□□□□□ -1.03
LRCH3-219ENST00000494069 PLA2G15Q8NCC3 412 aa8.6□□□□□ -1.03
LRCH3-219ENST00000494069 DENND6BQ8NEG7 585 aa8.6□□□□□ -1.03
LRCH3-219ENST00000494069 FAM174AQ8TBP5 190 aa8.6□□□□□ -1.03
LRCH3-219ENST00000494069 LRRN4Q8WUT4 740 aa8.6□□□□□ -1.03
LRCH3-219ENST00000494069 HNRNPLLQ8WVV9 542 aaKnown RBP8.6□□□□□ -1.03
LRCH3-219ENST00000494069 TSACCQ96A04 125 aaPredicted RBP8.6□□□□□ -1.03
LRCH3-219ENST00000494069 ECHDC3Q96DC8 303 aa8.6□□□□□ -1.03
LRCH3-219ENST00000494069 ZNF641Q96N77 438 aaPredicted RBP8.6□□□□□ -1.03
LRCH3-219ENST00000494069 TUBGCP5Q96RT8 1024 aa8.6□□□□□ -1.03
LRCH3-219ENST00000494069 EIF3CQ99613 913 aaKnown RBP8.6□□□□□ -1.03
LRCH3-219ENST00000494069 LRRC61Q9BV99 259 aa8.6□□□□□ -1.03
LRCH3-219ENST00000494069 CLPBQ9H078 707 aa8.6□□□□□ -1.03
LRCH3-219ENST00000494069 DONSONQ9NYP3 566 aa8.6□□□□□ -1.03
LRCH3-219ENST00000494069 NLGN3Q9NZ94 848 aa8.6□□□□□ -1.03
LRCH3-219ENST00000494069 IP6K2Q9UHH9 426 aa8.6□□□□□ -1.03
LRCH3-219ENST00000494069 ATP8A1Q9Y2Q0 1164 aa8.6□□□□□ -1.03
LRCH3-219ENST00000494069 LUC7L2Q9Y383 392 aaKnown RBP8.6□□□□□ -1.03
LRCH3-219ENST00000494069 GPSM3Q9Y4H4 160 aa8.6□□□□□ -1.03
LRCH3-219ENST00000494069 OR1A2Q9Y585 309 aa8.6□□□□□ -1.03
LRCH3-219ENST00000494069 BZW2Q9Y6E2 419 aaKnown RBP8.6□□□□□ -1.03
LRCH3-219ENST00000494069 LRRK1Q38SD2 2015 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 ZFYVE26Q68DK2 2539 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 ANKRD11Q6UB99 2663 aaPredicted RBP8.59□□□□□ -1.03
LRCH3-219ENST00000494069 A0A0U1RQS6 177 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 CPED1A4D0V7 1026 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 NEMP2A6NFY4 417 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 TRAFD1O14545 582 aaPredicted RBP8.59□□□□□ -1.03
LRCH3-219ENST00000494069 AQP9O43315 295 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 TLX3O43711 291 aaPredicted RBP8.59□□□□□ -1.03
LRCH3-219ENST00000494069 LZTS3O60299 673 aaPredicted RBP8.59□□□□□ -1.03
LRCH3-219ENST00000494069 OPA1O60313 960 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 MAP3K6O95382 1288 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 MT-CO3P00414 261 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 TSHRP16473 764 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 GJC1P36383 396 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 ARL4AP40617 200 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 ARSEP51690 589 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 THOP1P52888 689 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 ADKP55263 362 aaKnown RBP8.59□□□□□ -1.03
LRCH3-219ENST00000494069 CDH6P55285 790 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 TAS2R40P59535 323 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 MAXP61244 160 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 BCL2L1Q07817 233 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 NSUN2Q08J23 767 aaKnown RBP eCLIP8.59□□□□□ -1.03
LRCH3-219ENST00000494069 ELP6Q0PNE2 266 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 ILKQ13418 452 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 IHHQ14623 411 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 INPP5AQ14642 412 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 ACAP1Q15027 740 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 LRRC14Q15048 493 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 ALG11Q2TAA5 492 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 ASTE1Q2TB18 679 aaPredicted RBP8.59□□□□□ -1.03
LRCH3-219ENST00000494069 PRRT3Q5FWE3 981 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 CFAP58Q5T655 872 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 FAXCQ5TGI0 409 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 TMCO4Q5TGY1 634 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 ERAP2Q6P179 960 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 GUSBP11Q6P575 273 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 BRAT1Q6PJG6 821 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 CRTC1Q6UUV9 634 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 TMCO3Q6UWJ1 677 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 ENPP7Q6UWV6 458 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 PHACTR4Q8IZ21 702 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 DCBLD1Q8N8Z6 715 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 HCAR2Q8TDS4 363 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 TEKT4Q8WW24 435 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 RFFLQ8WZ73 363 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 CRELD1Q96HD1 420 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms