RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 CBX4O00257 560 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 H2AFYO75367 372 aaKnown RBP10.71□□□□□ -0.69
CLCN6-208ENST00000494028 CKMP06732 381 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 ADH1AP07327 375 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 PIRTP0C851 137 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 RALBP11234 206 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 COL6A2P12110 1019 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 NQO1P15559 274 aaKnown RBP10.71□□□□□ -0.69
CLCN6-208ENST00000494028 STMN1P16949 149 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 OGNP20774 298 aaKnown RBP10.71□□□□□ -0.69
CLCN6-208ENST00000494028 SAT1P21673 171 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 GRK2P25098 689 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 SERPINB3P29508 390 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 CDC25CP30307 473 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 LEPRP48357 1165 aaKnown RBP10.71□□□□□ -0.69
CLCN6-208ENST00000494028 SLC1A6P48664 564 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 PRAMEP78395 509 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 POU4F1Q01851 419 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 FPGSQ05932 587 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 TUBB3Q13509 450 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 SLC12A1Q13621 1099 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 SEMA3AQ14563 771 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 PABPC1LQ4VXU2 614 aaKnown RBP10.71□□□□□ -0.69
CLCN6-208ENST00000494028 TECRLQ5HYJ1 363 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 LINGO4Q6UY18 593 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 CCDC149Q6ZUS6 474 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 ALYREFQ86V81 257 aaKnown RBP10.71□□□□□ -0.69
CLCN6-208ENST00000494028 RNF135Q8IUD6 432 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 CILP2Q8IUL8 1156 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 LMNTD2Q8IXW0 634 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 CPXM2Q8N436 756 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 CARNMT1Q8N4J0 409 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 KIF2BQ8N4N8 673 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 KREMEN2Q8NCW0 462 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 LPCAT1Q8NF37 534 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 OR13C4Q8NGS5 318 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 STYXQ8WUJ0 223 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 HDAC10Q969S8 669 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 TSNARE1Q96NA8 513 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 GPR78Q96P69 363 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 GCNAQ96QF7 691 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 CYP2S1Q96SQ9 504 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 SIKE1Q9BRV8 207 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 WWP1Q9H0M0 922 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 TASP1Q9H6P5 420 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 NMRAL1Q9HBL8 299 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 SCUBE2Q9NQ36 999 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 POLR3BQ9NW08 1133 aaPredicted RBP10.71□□□□□ -0.69
CLCN6-208ENST00000494028 CFAP97Q9P2B7 532 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 VPS51Q9UID3 782 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 LSM7Q9UK45 103 aaKnown RBP10.71□□□□□ -0.69
CLCN6-208ENST00000494028 TRIM33Q9UPN9 1127 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 ARL5AQ9Y689 179 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 TRAV19A0A0A6YYK7 116 aa10.7□□□□□ -0.7
CLCN6-208ENST00000494028 CCDC162PA2VCL2 907 aa10.7□□□□□ -0.7
CLCN6-208ENST00000494028 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.7□□□□□ -0.7
CLCN6-208ENST00000494028 TARM1B6A8C7 271 aa10.7□□□□□ -0.7
CLCN6-208ENST00000494028 H0Y626 953 aa10.7□□□□□ -0.7
CLCN6-208ENST00000494028 FCHO1O14526 889 aa10.7□□□□□ -0.7
CLCN6-208ENST00000494028 BUD23O43709 281 aaKnown RBP10.7□□□□□ -0.7
CLCN6-208ENST00000494028 CBX6O95503 412 aa10.7□□□□□ -0.7
CLCN6-208ENST00000494028 GLUD1P00367 558 aa10.7□□□□□ -0.7
CLCN6-208ENST00000494028 GOT2P00505 430 aaKnown RBP10.7□□□□□ -0.7
CLCN6-208ENST00000494028 PRLP01236 227 aa10.7□□□□□ -0.7
CLCN6-208ENST00000494028 T-ENOLP0DO92 83 aa10.7□□□□□ -0.7
CLCN6-208ENST00000494028 GJA1P17302 382 aa10.7□□□□□ -0.7
CLCN6-208ENST00000494028 HDCP19113 662 aa10.7□□□□□ -0.7
CLCN6-208ENST00000494028 PSMA3P25788 255 aa10.7□□□□□ -0.7
CLCN6-208ENST00000494028 CRABP2P29373 138 aa10.7□□□□□ -0.7
CLCN6-208ENST00000494028 CTNNB1P35222 781 aa10.7□□□□□ -0.7
CLCN6-208ENST00000494028 ABCE1P61221 599 aaKnown RBP10.7□□□□□ -0.7
CLCN6-208ENST00000494028 CDH18Q13634 790 aa10.7□□□□□ -0.7
CLCN6-208ENST00000494028 LAMB3Q13751 1172 aa10.7□□□□□ -0.7
CLCN6-208ENST00000494028 PTPRCAPQ14761 206 aa10.7□□□□□ -0.7
CLCN6-208ENST00000494028 TYSND1Q2T9J0 566 aa10.7□□□□□ -0.7
CLCN6-208ENST00000494028 TSNAXIP1Q2TAA8 658 aa10.7□□□□□ -0.7
CLCN6-208ENST00000494028 TMEM240Q5SV17 173 aa10.7□□□□□ -0.7
CLCN6-208ENST00000494028 PLPP4Q5VZY2 271 aa10.7□□□□□ -0.7
CLCN6-208ENST00000494028 CYB5D1Q6P9G0 228 aa10.7□□□□□ -0.7
CLCN6-208ENST00000494028 PSRC1Q6PGN9 363 aaPredicted RBP10.7□□□□□ -0.7
CLCN6-208ENST00000494028 NCEH1Q6PIU2 408 aa10.7□□□□□ -0.7
CLCN6-208ENST00000494028 NAPRTQ6XQN6 538 aa10.7□□□□□ -0.7
CLCN6-208ENST00000494028 PTAR1Q7Z6K3 402 aaPredicted RBP10.7□□□□□ -0.7
CLCN6-208ENST00000494028 TTC7BQ86TV6 843 aa10.7□□□□□ -0.7
CLCN6-208ENST00000494028 LDB1Q86U70 411 aaPredicted RBP10.7□□□□□ -0.7
CLCN6-208ENST00000494028 MTDHQ86UE4 582 aaKnown RBP10.7□□□□□ -0.7
CLCN6-208ENST00000494028 SPNS2Q8IVW8 549 aa10.7□□□□□ -0.7
CLCN6-208ENST00000494028 BBS7Q8IWZ6 715 aa10.7□□□□□ -0.7
CLCN6-208ENST00000494028 TNS4Q8IZW8 715 aa10.7□□□□□ -0.7
CLCN6-208ENST00000494028 TMEM151AQ8N4L1 468 aa10.7□□□□□ -0.7
CLCN6-208ENST00000494028 GPR150Q8NGU9 434 aa10.7□□□□□ -0.7
CLCN6-208ENST00000494028 GABPB2Q8TAK5 448 aaPredicted RBP10.7□□□□□ -0.7
CLCN6-208ENST00000494028 RIN3Q8TB24 985 aa10.7□□□□□ -0.7
CLCN6-208ENST00000494028 SHKBP1Q8TBC3 707 aa10.7□□□□□ -0.7
CLCN6-208ENST00000494028 SLC22A17Q8WUG5 538 aa10.7□□□□□ -0.7
CLCN6-208ENST00000494028 BADQ92934 168 aa10.7□□□□□ -0.7
CLCN6-208ENST00000494028 KLHL29Q96CT2 875 aa10.7□□□□□ -0.7
CLCN6-208ENST00000494028 SLC7A6OSQ96CW6 309 aaPredicted RBP10.7□□□□□ -0.7
CLCN6-208ENST00000494028 TBATAQ96M53 351 aa10.7□□□□□ -0.7
CLCN6-208ENST00000494028 TMEM237Q96Q45 408 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms