RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 TMCC2O75069 709 aa20.22■□□□□ 0.83
RNF40-203ENST00000493683 NR2F6P10588 404 aa20.22■□□□□ 0.83
RNF40-203ENST00000493683 OGNP20774 298 aaKnown RBP20.22■□□□□ 0.83
RNF40-203ENST00000493683 BRMS1LQ5PSV4 323 aa20.22■□□□□ 0.83
RNF40-203ENST00000493683 BICRALQ6AI39 1079 aa20.22■□□□□ 0.83
RNF40-203ENST00000493683 MFSD5Q6N075 450 aa20.22■□□□□ 0.83
RNF40-203ENST00000493683 PLPPR4Q7Z2D5 763 aa20.22■□□□□ 0.83
RNF40-203ENST00000493683 ZC3H7AQ8IWR0 971 aaKnown RBP20.22■□□□□ 0.83
RNF40-203ENST00000493683 CHPFQ8IZ52 775 aa20.22■□□□□ 0.83
RNF40-203ENST00000493683 CXorf40AQ8TE69 158 aa20.22■□□□□ 0.83
RNF40-203ENST00000493683 PGLYRP2Q96PD5 576 aa20.22■□□□□ 0.83
RNF40-203ENST00000493683 PRDM12Q9H4Q4 367 aa20.22■□□□□ 0.83
RNF40-203ENST00000493683 RCOR3Q9P2K3 495 aaPredicted RBP20.22■□□□□ 0.83
RNF40-203ENST00000493683 SAMHD1Q9Y3Z3 626 aaKnown RBP20.22■□□□□ 0.83
RNF40-203ENST00000493683 DIP2BQ9P265 1576 aa20.21■□□□□ 0.83
RNF40-203ENST00000493683 LPOP22079 712 aaPredicted RBP20.21■□□□□ 0.83
RNF40-203ENST00000493683 ZACNQ401N2 412 aa20.21■□□□□ 0.83
RNF40-203ENST00000493683 ZC3H12AQ5D1E8 599 aaKnown RBP20.21■□□□□ 0.83
RNF40-203ENST00000493683 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.21■□□□□ 0.83
RNF40-203ENST00000493683 RIOX2Q8IUF8 465 aa20.21■□□□□ 0.83
RNF40-203ENST00000493683 RASGEF1CQ8N431 466 aa20.21■□□□□ 0.83
RNF40-203ENST00000493683 LRRC52Q8N7C0 313 aa20.21■□□□□ 0.83
RNF40-203ENST00000493683 SENP6Q9GZR1 1112 aaPredicted RBP20.21■□□□□ 0.83
RNF40-203ENST00000493683 ZDHHC6Q9H6R6 413 aa20.21■□□□□ 0.83
RNF40-203ENST00000493683 FBXO5Q9UKT4 447 aa20.21■□□□□ 0.83
RNF40-203ENST00000493683 TECPR2O15040 1411 aa20.21■□□□□ 0.83
RNF40-203ENST00000493683 UBAP2LQ14157 1087 aaKnown RBP20.21■□□□□ 0.83
RNF40-203ENST00000493683 PYDC2Q56P42 97 aa20.21■□□□□ 0.83
RNF40-203ENST00000493683 COLGALT2Q8IYK4 626 aa20.21■□□□□ 0.83
RNF40-203ENST00000493683 XPR1Q9UBH6 696 aa20.21■□□□□ 0.83
RNF40-203ENST00000493683 LRIG2O94898 1065 aa20.21■□□□□ 0.83
RNF40-203ENST00000493683 MATKP42679 507 aa20.21■□□□□ 0.83
RNF40-203ENST00000493683 RHAGQ02094 409 aa20.21■□□□□ 0.83
RNF40-203ENST00000493683 TEX47Q8TBZ9 253 aa20.21■□□□□ 0.83
RNF40-203ENST00000493683 CAPSLQ8WWF8 208 aa20.21■□□□□ 0.83
RNF40-203ENST00000493683 GALNT8Q9NY28 637 aa20.21■□□□□ 0.83
RNF40-203ENST00000493683 DERAQ9Y315 318 aa20.21■□□□□ 0.83
RNF40-203ENST00000493683 PCDHGA4Q9Y5G9 962 aa20.21■□□□□ 0.83
RNF40-203ENST00000493683 TNS2Q63HR2 1409 aa20.21■□□□□ 0.83
RNF40-203ENST00000493683 TCRBV9S1A1TA0A576 114 aa20.21■□□□□ 0.83
RNF40-203ENST00000493683 SERPINA1P01009 418 aa20.21■□□□□ 0.83
RNF40-203ENST00000493683 BPGMP07738 259 aa20.21■□□□□ 0.83
RNF40-203ENST00000493683 UBA1P22314 1058 aaKnown RBP20.21■□□□□ 0.83
RNF40-203ENST00000493683 HSPA14Q0VDF9 509 aa20.21■□□□□ 0.83
RNF40-203ENST00000493683 PTPRNQ16849 979 aa20.21■□□□□ 0.83
RNF40-203ENST00000493683 CRISPLD1Q9H336 500 aa20.21■□□□□ 0.83
RNF40-203ENST00000493683 FBXO10Q9UK96 956 aa20.21■□□□□ 0.83
RNF40-203ENST00000493683 SSNA1O43805 119 aa20.2■□□□□ 0.82
RNF40-203ENST00000493683 SLC22A3O75751 556 aa20.2■□□□□ 0.82
RNF40-203ENST00000493683 NTRK1P04629 796 aa20.2■□□□□ 0.82
RNF40-203ENST00000493683 NR2F1P10589 423 aa20.2■□□□□ 0.82
RNF40-203ENST00000493683 ZDHHC20Q5W0Z9 365 aa20.2■□□□□ 0.82
RNF40-203ENST00000493683 APTXQ7Z2E3 356 aaKnown RBP20.2■□□□□ 0.82
RNF40-203ENST00000493683 PQLC1Q8N2U9 271 aa20.2■□□□□ 0.82
RNF40-203ENST00000493683 HJURPQ8NCD3 748 aaPredicted RBP20.2■□□□□ 0.82
RNF40-203ENST00000493683 TRAPPC12Q8WVT3 735 aa20.2■□□□□ 0.82
RNF40-203ENST00000493683 ACO2Q99798 780 aaKnown RBP20.2■□□□□ 0.82
RNF40-203ENST00000493683 LHX5Q9H2C1 402 aa20.2■□□□□ 0.82
RNF40-203ENST00000493683 RHOJQ9H4E5 214 aa20.2■□□□□ 0.82
RNF40-203ENST00000493683 ABCB10Q9NRK6 738 aa20.2■□□□□ 0.82
RNF40-203ENST00000493683 COQ6Q9Y2Z9 468 aa20.2■□□□□ 0.82
RNF40-203ENST00000493683 CHURC1-FNTBB4DL54 471 aa20.2■□□□□ 0.82
RNF40-203ENST00000493683 GNRH1P01148 92 aa20.2■□□□□ 0.82
RNF40-203ENST00000493683 HLA-DQA2P01906 255 aa20.2■□□□□ 0.82
RNF40-203ENST00000493683 CCR4P51679 360 aa20.2■□□□□ 0.82
RNF40-203ENST00000493683 ZIK1Q3SY52 487 aaPredicted RBP20.2■□□□□ 0.82
RNF40-203ENST00000493683 WSCD1Q658N2 575 aa20.2■□□□□ 0.82
RNF40-203ENST00000493683 KLHL24Q6TFL4 600 aa20.2■□□□□ 0.82
RNF40-203ENST00000493683 PIGZQ86VD9 579 aa20.2■□□□□ 0.82
RNF40-203ENST00000493683 FNDC11Q9BVV2 318 aa20.2■□□□□ 0.82
RNF40-203ENST00000493683 AP3D1O14617 1153 aa20.2■□□□□ 0.82
RNF40-203ENST00000493683 SUV39H1O43463 412 aa20.2■□□□□ 0.82
RNF40-203ENST00000493683 PGM3O95394 542 aa20.2■□□□□ 0.82
RNF40-203ENST00000493683 DBTP11182 482 aaKnown RBP20.2■□□□□ 0.82
RNF40-203ENST00000493683 C15orf52Q6ZUT6 534 aaKnown RBP20.2■□□□□ 0.82
RNF40-203ENST00000493683 TCAIMQ8N3R3 496 aa20.2■□□□□ 0.82
RNF40-203ENST00000493683 PTCD2Q8WV60 388 aaKnown RBP20.2■□□□□ 0.82
RNF40-203ENST00000493683 HAS1Q92839 578 aa20.2■□□□□ 0.82
RNF40-203ENST00000493683 SLC47A1Q96FL8 570 aa20.2■□□□□ 0.82
RNF40-203ENST00000493683 TIMMDC1Q9NPL8 285 aa20.2■□□□□ 0.82
RNF40-203ENST00000493683 CLTCQ00610 1675 aaKnown RBP20.2■□□□□ 0.82
RNF40-203ENST00000493683 TPSB2P20231 275 aa20.2■□□□□ 0.82
RNF40-203ENST00000493683 CRHR1P34998 444 aa20.2■□□□□ 0.82
RNF40-203ENST00000493683 TPSAB1Q15661 275 aa20.2■□□□□ 0.82
RNF40-203ENST00000493683 ERICH5Q6P6B1 374 aa20.2■□□□□ 0.82
RNF40-203ENST00000493683 COX4I2Q96KJ9 171 aa20.2■□□□□ 0.82
RNF40-203ENST00000493683 ING3Q9NXR8 418 aa20.2■□□□□ 0.82
RNF40-203ENST00000493683 H3BNX3 289 aa20.19■□□□□ 0.82
RNF40-203ENST00000493683 EPORP19235 508 aa20.19■□□□□ 0.82
RNF40-203ENST00000493683 CASP5P51878 434 aa20.19■□□□□ 0.82
RNF40-203ENST00000493683 C16orf59Q7L2K0 433 aa20.19■□□□□ 0.82
RNF40-203ENST00000493683 PSMA8Q8TAA3 256 aa20.19■□□□□ 0.82
RNF40-203ENST00000493683 MARK4Q96L34 752 aa20.19■□□□□ 0.82
RNF40-203ENST00000493683 IRAK3Q9Y616 596 aa20.19■□□□□ 0.82
RNF40-203ENST00000493683 SQORQ9Y6N5 450 aa20.19■□□□□ 0.82
RNF40-203ENST00000493683 TRAV19A0A0A6YYK7 116 aa20.19■□□□□ 0.82
RNF40-203ENST00000493683 ERN1O75460 977 aaKnown RBP20.19■□□□□ 0.82
RNF40-203ENST00000493683 ZNF37AP17032 561 aaPredicted RBP20.19■□□□□ 0.82
RNF40-203ENST00000493683 RBFAQ8N0V3 343 aa20.19■□□□□ 0.82
RNF40-203ENST00000493683 CCDC185Q8N715 623 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms