RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 VWA7Q9Y334 891 aa6.9□□□□□ -1.3
VPS13B-205ENST00000493587 HSPB11Q9Y547 144 aa6.9□□□□□ -1.3
VPS13B-205ENST00000493587 PCDHB13Q9Y5F0 798 aa6.9□□□□□ -1.3
VPS13B-205ENST00000493587 CACNG2Q9Y698 323 aa6.9□□□□□ -1.3
VPS13B-205ENST00000493587 PDCD11Q14690 1871 aaKnown RBP6.9□□□□□ -1.3
VPS13B-205ENST00000493587 H3BMM5 538 aa6.9□□□□□ -1.31
VPS13B-205ENST00000493587 RNF103O00237 685 aa6.9□□□□□ -1.31
VPS13B-205ENST00000493587 NRP2O60462 931 aa6.9□□□□□ -1.31
VPS13B-205ENST00000493587 LRRN2O75325 713 aa6.9□□□□□ -1.31
VPS13B-205ENST00000493587 BCAS1O75363 584 aaPredicted RBP6.9□□□□□ -1.31
VPS13B-205ENST00000493587 APOC1P02654 83 aa6.9□□□□□ -1.31
VPS13B-205ENST00000493587 ZNF806P0C7X5 589 aa6.9□□□□□ -1.31
VPS13B-205ENST00000493587 XRCC5P13010 732 aaKnown RBP6.9□□□□□ -1.31
VPS13B-205ENST00000493587 HOXB1P14653 301 aaPredicted RBP6.9□□□□□ -1.31
VPS13B-205ENST00000493587 GAP43P17677 238 aa6.9□□□□□ -1.31
VPS13B-205ENST00000493587 GP5P40197 560 aa6.9□□□□□ -1.31
VPS13B-205ENST00000493587 MAGEA11P43364 429 aa6.9□□□□□ -1.31
VPS13B-205ENST00000493587 LEPRP48357 1165 aaKnown RBP6.9□□□□□ -1.31
VPS13B-205ENST00000493587 TPMTP51580 245 aa6.9□□□□□ -1.31
VPS13B-205ENST00000493587 EN1Q05925 392 aaPredicted RBP6.9□□□□□ -1.31
VPS13B-205ENST00000493587 FPGSQ05932 587 aa6.9□□□□□ -1.31
VPS13B-205ENST00000493587 GPS1Q13098 491 aa6.9□□□□□ -1.31
VPS13B-205ENST00000493587 PTK6Q13882 451 aa6.9□□□□□ -1.31
VPS13B-205ENST00000493587 RFTN1Q14699 578 aaPredicted RBP6.9□□□□□ -1.31
VPS13B-205ENST00000493587 BTBD16Q32M84 506 aa6.9□□□□□ -1.31
VPS13B-205ENST00000493587 TRIM60Q495X7 471 aa6.9□□□□□ -1.31
VPS13B-205ENST00000493587 RHBDF2Q6PJF5 856 aa6.9□□□□□ -1.31
VPS13B-205ENST00000493587 BNIPLQ7Z465 357 aa6.9□□□□□ -1.31
VPS13B-205ENST00000493587 TMEM126BQ8IUX1 230 aa6.9□□□□□ -1.31
VPS13B-205ENST00000493587 DDIASQ8IXT1 998 aa6.9□□□□□ -1.31
VPS13B-205ENST00000493587 SFRP1Q8N474 314 aa6.9□□□□□ -1.31
VPS13B-205ENST00000493587 SLC7A14Q8TBB6 771 aa6.9□□□□□ -1.31
VPS13B-205ENST00000493587 FBXL20Q96IG2 436 aa6.9□□□□□ -1.31
VPS13B-205ENST00000493587 APOPT1Q96IL0 206 aa6.9□□□□□ -1.31
VPS13B-205ENST00000493587 RADILQ96JH8 1075 aa6.9□□□□□ -1.31
VPS13B-205ENST00000493587 ZNF597Q96LX8 424 aa6.9□□□□□ -1.31
VPS13B-205ENST00000493587 EFCAB1Q9HAE3 211 aa6.9□□□□□ -1.31
VPS13B-205ENST00000493587 DDX4Q9NQI0 724 aaKnown RBP6.9□□□□□ -1.31
VPS13B-205ENST00000493587 EVA1BQ9NVM1 165 aa6.9□□□□□ -1.31
VPS13B-205ENST00000493587 GCNT4Q9P109 453 aa6.9□□□□□ -1.31
VPS13B-205ENST00000493587 MALT1Q9UDY8 824 aa6.9□□□□□ -1.31
VPS13B-205ENST00000493587 PNMA8BQ9ULN7 279 aaPredicted RBP6.9□□□□□ -1.31
VPS13B-205ENST00000493587 UBE4BO95155 1302 aa6.9□□□□□ -1.31
VPS13B-205ENST00000493587 LEUTXA8MZ59 168 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 LINC00587B1AMM8 73 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 C19orf81C9J6K1 198 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 H0Y626 953 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 BET1O15155 118 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 PPP1R11O60927 126 aaPredicted RBP6.89□□□□□ -1.31
VPS13B-205ENST00000493587 XYLBO75191 536 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 TIPRLO75663 272 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 IL10P22301 178 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 HLA-FP30511 346 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 PPP5CP53041 499 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 RPP38P78345 283 aaKnown RBP6.89□□□□□ -1.31
VPS13B-205ENST00000493587 GTF2IP78347 998 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 BST2Q10589 180 aaKnown RBP6.89□□□□□ -1.31
VPS13B-205ENST00000493587 LEXMQ3ZCV2 418 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 WDR44Q5JSH3 913 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 SYDE1Q6ZW31 735 aaPredicted RBP6.89□□□□□ -1.31
VPS13B-205ENST00000493587 HDDC2Q7Z4H3 204 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 SNX20Q7Z614 316 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 TBC1D21Q8IYX1 336 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 CBR4Q8N4T8 237 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 BANPQ8N9N5 519 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 AGBL3Q8NEM8 1001 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 MCFD2Q8NI22 146 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 DYNLL2Q96FJ2 89 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 FOPNLQ96NB1 174 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 ZNF285Q96NJ3 590 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 DOK1Q99704 481 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 ANKRD60Q9BZ19 345 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 UPF3AQ9H1J1 476 aaKnown RBP6.89□□□□□ -1.31
VPS13B-205ENST00000493587 DHX33Q9H6R0 707 aaKnown RBP6.89□□□□□ -1.31
VPS13B-205ENST00000493587 RANBP3Q9H6Z4 567 aaPredicted RBP6.89□□□□□ -1.31
VPS13B-205ENST00000493587 AKIP1Q9NQ31 210 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 TRMT13Q9NUP7 481 aaKnown RBP6.89□□□□□ -1.31
VPS13B-205ENST00000493587 IFT80Q9P2H3 777 aaPredicted RBP6.89□□□□□ -1.31
VPS13B-205ENST00000493587 POLIQ9UNA4 740 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 PLCL2Q9UPR0 1127 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 ATF5Q9Y2D1 282 aaPredicted RBP6.89□□□□□ -1.31
VPS13B-205ENST00000493587 HRH3Q9Y5N1 445 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 PSAT1Q9Y617 370 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 CIB4A0PJX0 185 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 F8W036 122 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 CYB561D2O14569 222 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 CSDE1O75534 798 aaKnown RBP6.89□□□□□ -1.31
VPS13B-205ENST00000493587 FTLP02792 175 aaPredicted RBP6.89□□□□□ -1.31
VPS13B-205ENST00000493587 TNNI3P19429 210 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 AXLP30530 894 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 TECP42680 631 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 QARSP47897 775 aaKnown RBP6.89□□□□□ -1.31
VPS13B-205ENST00000493587 BNC1Q01954 994 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 FBXO43Q4G163 708 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 C2CD6Q53TS8 623 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 GTF2IRD2BQ6EKJ0 949 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 FOXR2Q6PJQ5 311 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 PPP4R3CPQ6ZMV5 832 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 LRRC55Q6ZSA7 311 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 GTF2IRD2Q86UP8 949 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms