RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 CA4P22748 312 aa12.88□□□□□ -0.35
CLIP2-209ENST00000493166 CD38P28907 300 aa12.88□□□□□ -0.35
CLIP2-209ENST00000493166 ATP5OP48047 213 aa12.88□□□□□ -0.35
CLIP2-209ENST00000493166 CSNK1EP49674 416 aaKnown RBP12.88□□□□□ -0.35
CLIP2-209ENST00000493166 TRAF2Q12933 501 aa12.88□□□□□ -0.35
CLIP2-209ENST00000493166 GRIK2Q13002 908 aa12.88□□□□□ -0.35
CLIP2-209ENST00000493166 SGCGQ13326 291 aa12.88□□□□□ -0.35
CLIP2-209ENST00000493166 NOMO1Q15155 1222 aa12.88□□□□□ -0.35
CLIP2-209ENST00000493166 RPS6KA1Q15418 735 aa12.88□□□□□ -0.35
CLIP2-209ENST00000493166 SLC45A4Q5BKX6 768 aa12.88□□□□□ -0.35
CLIP2-209ENST00000493166 ARMC12Q5T9G4 340 aa12.88□□□□□ -0.35
CLIP2-209ENST00000493166 SEL1L2Q5TEA6 688 aa12.88□□□□□ -0.35
CLIP2-209ENST00000493166 MEI1Q5TIA1 1274 aa12.88□□□□□ -0.35
CLIP2-209ENST00000493166 LAYNQ6UX15 382 aa12.88□□□□□ -0.35
CLIP2-209ENST00000493166 TRIM58Q8NG06 486 aa12.88□□□□□ -0.35
CLIP2-209ENST00000493166 ACTL9Q8TC94 416 aa12.88□□□□□ -0.35
CLIP2-209ENST00000493166 NETO1Q8TDF5 533 aa12.88□□□□□ -0.35
CLIP2-209ENST00000493166 SKA1Q96BD8 255 aa12.88□□□□□ -0.35
CLIP2-209ENST00000493166 AGAP3Q96P47 875 aa12.88□□□□□ -0.35
CLIP2-209ENST00000493166 QKIQ96PU8 341 aaKnown RBP eCLIP12.88□□□□□ -0.35
CLIP2-209ENST00000493166 MYOCQ99972 504 aa12.88□□□□□ -0.35
CLIP2-209ENST00000493166 WRAP53Q9BUR4 548 aaKnown RBP12.88□□□□□ -0.35
CLIP2-209ENST00000493166 SLC17A9Q9BYT1 436 aa12.88□□□□□ -0.35
CLIP2-209ENST00000493166 ZDHHC5Q9C0B5 715 aa12.88□□□□□ -0.35
CLIP2-209ENST00000493166 TMEM9BQ9NQ34 198 aa12.88□□□□□ -0.35
CLIP2-209ENST00000493166 PCDHB9Q9Y5E1 797 aa12.88□□□□□ -0.35
CLIP2-209ENST00000493166 RAI2Q9Y5P3 530 aa12.88□□□□□ -0.35
CLIP2-209ENST00000493166 ASCC3Q8N3C0 2202 aaKnown RBP12.87□□□□□ -0.35
CLIP2-209ENST00000493166 RIOK3O14730 519 aaKnown RBP12.87□□□□□ -0.35
CLIP2-209ENST00000493166 WNT9AO14904 365 aa12.87□□□□□ -0.35
CLIP2-209ENST00000493166 ZSCAN12O43309 604 aa12.87□□□□□ -0.35
CLIP2-209ENST00000493166 PGLSO95336 258 aa12.87□□□□□ -0.35
CLIP2-209ENST00000493166 NFKBIAP25963 317 aa12.87□□□□□ -0.35
CLIP2-209ENST00000493166 PTPN3P26045 913 aa12.87□□□□□ -0.35
CLIP2-209ENST00000493166 AKT2P31751 481 aa12.87□□□□□ -0.35
CLIP2-209ENST00000493166 MMP12P39900 470 aa12.87□□□□□ -0.35
CLIP2-209ENST00000493166 C21orf59P57076 290 aa12.87□□□□□ -0.35
CLIP2-209ENST00000493166 FAM193AP78312 1265 aa12.87□□□□□ -0.35
CLIP2-209ENST00000493166 OTUD4Q01804 1114 aaKnown RBP12.87□□□□□ -0.35
CLIP2-209ENST00000493166 NIPAL4Q0D2K0 466 aa12.87□□□□□ -0.35
CLIP2-209ENST00000493166 XRCC4Q13426 336 aa12.87□□□□□ -0.35
CLIP2-209ENST00000493166 STAT4Q14765 748 aa12.87□□□□□ -0.35
CLIP2-209ENST00000493166 RSPO4Q2I0M5 234 aaPredicted RBP12.87□□□□□ -0.35
CLIP2-209ENST00000493166 TMEM52BQ4KMG9 183 aa12.87□□□□□ -0.35
CLIP2-209ENST00000493166 STPG1Q5TH74 334 aa12.87□□□□□ -0.35
CLIP2-209ENST00000493166 MINDY1Q8N5J2 469 aa12.87□□□□□ -0.35
CLIP2-209ENST00000493166 CNTD1Q8N815 330 aa12.87□□□□□ -0.35
CLIP2-209ENST00000493166 FERMT1Q9BQL6 677 aa12.87□□□□□ -0.35
CLIP2-209ENST00000493166 FZD3Q9NPG1 666 aa12.87□□□□□ -0.35
CLIP2-209ENST00000493166 ANKRD6Q9Y2G4 727 aa12.87□□□□□ -0.35
CLIP2-209ENST00000493166 CEP250Q9BV73 2442 aa12.87□□□□□ -0.35
CLIP2-209ENST00000493166 BPTFQ12830 3046 aa12.86□□□□□ -0.35
CLIP2-209ENST00000493166 VILLO15195 856 aa12.86□□□□□ -0.35
CLIP2-209ENST00000493166 MMP20O60882 483 aa12.86□□□□□ -0.35
CLIP2-209ENST00000493166 TM7SF2O76062 418 aa12.86□□□□□ -0.35
CLIP2-209ENST00000493166 CER1O95813 267 aa12.86□□□□□ -0.35
CLIP2-209ENST00000493166 PAK4O96013 591 aaPredicted RBP12.86□□□□□ -0.35
CLIP2-209ENST00000493166 SDHBP21912 280 aa12.86□□□□□ -0.35
CLIP2-209ENST00000493166 CD86P42081 329 aa12.86□□□□□ -0.35
CLIP2-209ENST00000493166 LIMK1P53667 647 aa12.86□□□□□ -0.35
CLIP2-209ENST00000493166 EIF3EP60228 445 aaKnown RBP12.86□□□□□ -0.35
CLIP2-209ENST00000493166 SEMG2Q02383 582 aa12.86□□□□□ -0.35
CLIP2-209ENST00000493166 FGL2Q14314 439 aa12.86□□□□□ -0.35
CLIP2-209ENST00000493166 TEX44Q53QW1 395 aa12.86□□□□□ -0.35
CLIP2-209ENST00000493166 FAM182AQ5T1J6 154 aa12.86□□□□□ -0.35
CLIP2-209ENST00000493166 IL27RAQ6UWB1 636 aa12.86□□□□□ -0.35
CLIP2-209ENST00000493166 DPPA4Q7L190 304 aa12.86□□□□□ -0.35
CLIP2-209ENST00000493166 CDKL3Q8IVW4 592 aaPredicted RBP12.86□□□□□ -0.35
CLIP2-209ENST00000493166 NDUFAF2Q8N183 169 aa12.86□□□□□ -0.35
CLIP2-209ENST00000493166 MFSD2AQ8NA29 543 aa12.86□□□□□ -0.35
CLIP2-209ENST00000493166 TTC13Q8NBP0 860 aa12.86□□□□□ -0.35
CLIP2-209ENST00000493166 ARRDC2Q8TBH0 407 aa12.86□□□□□ -0.35
CLIP2-209ENST00000493166 HTR3CQ8WXA8 447 aa12.86□□□□□ -0.35
CLIP2-209ENST00000493166 SPOCK2Q92563 424 aa12.86□□□□□ -0.35
CLIP2-209ENST00000493166 FAM118BQ9BPY3 351 aa12.86□□□□□ -0.35
CLIP2-209ENST00000493166 C1QTNF7Q9BXJ2 289 aa12.86□□□□□ -0.35
CLIP2-209ENST00000493166 C1QTNF2Q9BXJ5 285 aa12.86□□□□□ -0.35
CLIP2-209ENST00000493166 KLHL8Q9P2G9 620 aaPredicted RBP12.86□□□□□ -0.35
CLIP2-209ENST00000493166 PHTF1Q9UMS5 762 aa12.86□□□□□ -0.35
CLIP2-209ENST00000493166 CA5BQ9Y2D0 317 aa12.86□□□□□ -0.35
CLIP2-209ENST00000493166 KNL1Q8NG31 2342 aa12.85□□□□□ -0.35
CLIP2-209ENST00000493166 SCN8AQ9UQD0 1980 aa12.85□□□□□ -0.35
CLIP2-209ENST00000493166 A0A1W2PR77 199 aa12.85□□□□□ -0.35
CLIP2-209ENST00000493166 C4orf47A7E2U8 309 aa12.85□□□□□ -0.35
CLIP2-209ENST00000493166 CDX4O14627 284 aaPredicted RBP12.85□□□□□ -0.35
CLIP2-209ENST00000493166 KCNK3O14649 394 aa12.85□□□□□ -0.35
CLIP2-209ENST00000493166 LZTS3O60299 673 aaPredicted RBP12.85□□□□□ -0.35
CLIP2-209ENST00000493166 MAGEC1O60732 1142 aa12.85□□□□□ -0.35
CLIP2-209ENST00000493166 WNT1P04628 370 aa12.85□□□□□ -0.35
CLIP2-209ENST00000493166 MMP2P08253 660 aa12.85□□□□□ -0.35
CLIP2-209ENST00000493166 PDHA1P08559 390 aa12.85□□□□□ -0.35
CLIP2-209ENST00000493166 ELFN1P0C7U0 828 aa12.85□□□□□ -0.35
CLIP2-209ENST00000493166 RBP3P10745 1247 aa12.85□□□□□ -0.35
CLIP2-209ENST00000493166 C6P13671 934 aa12.85□□□□□ -0.35
CLIP2-209ENST00000493166 RBL1P28749 1068 aa12.85□□□□□ -0.35
CLIP2-209ENST00000493166 LIG3P49916 1009 aa12.85□□□□□ -0.35
CLIP2-209ENST00000493166 EPHB1P54762 984 aa12.85□□□□□ -0.35
CLIP2-209ENST00000493166 SKOR1P84550 965 aa12.85□□□□□ -0.35
CLIP2-209ENST00000493166 BNC1Q01954 994 aa12.85□□□□□ -0.35
CLIP2-209ENST00000493166 CCDC173Q0VFZ6 552 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms