RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 PCDH12Q9NPG4 1184 aa10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 RBM22Q9NW64 420 aaKnown RBP eCLIP10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 PCDHA3Q9Y5H8 950 aa10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 DOCK9Q9BZ29 2069 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 A0A1B0GTQ1 180 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 MACROD2A1Z1Q3 448 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 GRID2IPA4D2P6 1211 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 H0Y8X5 98 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 TOR1BO14657 336 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 FPGTO14772 594 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 FLRT2O43155 660 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 NRDCO43847 1150 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 PCDHGA12O60330 932 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 CST8O60676 142 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 MMP20O60882 483 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 PAK4O96013 591 aaPredicted RBP10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 CPP00450 1065 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 HLA-DQB2P05538 268 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 THEGLP0DJG4 465 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 CA4P22748 312 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 PTPN7P35236 360 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 RABIFP47224 123 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 ARRB1P49407 418 aaPredicted RBP10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 COPS2P61201 443 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 DYNLT1P63172 113 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 ITKQ08881 620 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 FGL2Q14314 439 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 AGERQ15109 404 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 INAVAQ3KP66 663 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 ARMC12Q5T9G4 340 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 NPNTQ6UXI9 565 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 DBX2Q6ZNG2 339 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 DPPA4Q7L190 304 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 ZSWIM9Q86XI8 627 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 NAXDQ8IW45 347 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 RNF10Q8N5U6 811 aaKnown RBP10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 LRRC57Q8N9N7 239 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 KRT35Q92764 455 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 LGMNQ99538 433 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 KLF6Q99612 283 aaPredicted RBP10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 MYOCQ99972 504 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 SEMA3CQ99985 751 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 WRAP53Q9BUR4 548 aaKnown RBP10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 GRPEL1Q9HAV7 217 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 NOD2Q9HC29 1040 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 GPR27Q9NS67 375 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 PHTF1Q9UMS5 762 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 EFR3BQ9Y2G0 817 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 LRRK1Q38SD2 2015 aa10.73□□□□□ -0.69
CDC42SE1-206ENST00000492796 DCHS1Q96JQ0 3298 aa10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 TTC24A2A3L6 582 aaPredicted RBP10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 GOLGA6L3A6NEY3 463 aa10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 MIF4GDA9UHW6 222 aaKnown RBP10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 KCNK1O00180 336 aa10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 KRT86O43790 486 aa10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 PGLSO95336 258 aa10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 ELFN1P0C7U0 828 aa10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 KRT10P13645 584 aa10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 C6P13671 934 aa10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 EPHA8P29322 1005 aaPredicted RBP10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 CETN2P41208 172 aa10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 RXRGP48443 463 aa10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 RWDD2BP57060 319 aa10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 AP1B1Q10567 949 aa10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 TRAF2Q12933 501 aa10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 KAZNQ674X7 775 aa10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 PSAPL1Q6NUJ1 521 aa10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 BBS12Q6ZW61 710 aa10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 PEX26Q7Z412 305 aa10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 PTAR1Q7Z6K3 402 aaPredicted RBP10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 NT5DC3Q86UY8 548 aa10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 SPATS2Q86XZ4 545 aaKnown RBP10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 LRRC8AQ8IWT6 810 aa10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 NDUFAF2Q8N183 169 aa10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 UBL4BQ8N7F7 174 aa10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 DEFB124Q8NES8 71 aa10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 OR13H1Q8NG92 308 aa10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 PDCD6IPQ8WUM4 868 aaKnown RBP10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 UBE2Q2Q8WVN8 375 aa10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 P3H4Q92791 437 aa10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 CENPTQ96BT3 561 aa10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 IFT43Q96FT9 208 aa10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 NSMCE3Q96MG7 304 aa10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 IL12RB2Q99665 862 aa10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 AMFRQ9UKV5 643 aa10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 CA5BQ9Y2D0 317 aa10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 TTLL3Q9Y4R7 772 aa10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 PCDHB9Q9Y5E1 797 aa10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 PCDHGC4Q9Y5F7 938 aa10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 RAI2Q9Y5P3 530 aa10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 ADGRG1Q9Y653 693 aa10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 COL5A1P20908 1838 aaPredicted RBP10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 ASCC3Q8N3C0 2202 aaKnown RBP10.72□□□□□ -0.69
CDC42SE1-206ENST00000492796 APOC4-APOC2K7ER74 178 aa10.71□□□□□ -0.69
CDC42SE1-206ENST00000492796 PSMD11O00231 422 aa10.71□□□□□ -0.69
CDC42SE1-206ENST00000492796 KCNK3O14649 394 aa10.71□□□□□ -0.69
CDC42SE1-206ENST00000492796 RAD51BO15315 384 aa10.71□□□□□ -0.69
CDC42SE1-206ENST00000492796 MTSS1O43312 755 aa10.71□□□□□ -0.69
CDC42SE1-206ENST00000492796 SH3BP5O60239 455 aa10.71□□□□□ -0.69
CDC42SE1-206ENST00000492796 LZTS3O60299 673 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms