RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-215	ENST00000492451	APOC2	P02655	101 aa		13.92	□□□□□ -0.18
PTPN7-215	ENST00000492451	TMEM52B	Q4KMG9	183 aa		13.92	□□□□□ -0.18
PTPN7-215	ENST00000492451	NDUFAF2	Q8N183	169 aa		13.92	□□□□□ -0.18
PTPN7-215	ENST00000492451	MINDY1	Q8N5J2	469 aa		13.92	□□□□□ -0.18
PTPN7-215	ENST00000492451	OR2I1P	Q8NGU4	316 aa		13.92	□□□□□ -0.18
PTPN7-215	ENST00000492451	TFB1M	Q8WVM0	346 aa	Known RBP	13.92	□□□□□ -0.18
PTPN7-215	ENST00000492451	ALG3	Q92685	438 aa		13.92	□□□□□ -0.18
PTPN7-215	ENST00000492451	KLK6	Q92876	244 aa		13.92	□□□□□ -0.18
PTPN7-215	ENST00000492451	HES6	Q96HZ4	224 aa		13.92	□□□□□ -0.18
PTPN7-215	ENST00000492451	CNTNAP3B	Q96NU0	1288 aa		13.92	□□□□□ -0.18
PTPN7-215	ENST00000492451	LENG8	Q96PV6	779 aa	Predicted RBP	13.92	□□□□□ -0.18
PTPN7-215	ENST00000492451	HEMGN	Q9BXL5	484 aa		13.92	□□□□□ -0.18
PTPN7-215	ENST00000492451	CNTNAP3	Q9BZ76	1288 aa		13.92	□□□□□ -0.18
PTPN7-215	ENST00000492451	PCDH12	Q9NPG4	1184 aa		13.92	□□□□□ -0.18
PTPN7-215	ENST00000492451	ITM2B	Q9Y287	266 aa		13.92	□□□□□ -0.18
PTPN7-215	ENST00000492451	TTLL3	Q9Y4R7	772 aa		13.92	□□□□□ -0.18
PTPN7-215	ENST00000492451	PCDHGC4	Q9Y5F7	938 aa		13.92	□□□□□ -0.18
PTPN7-215	ENST00000492451	CAPN6	Q9Y6Q1	641 aa		13.92	□□□□□ -0.18
PTPN7-215	ENST00000492451		A0A1W2PR77	199 aa		13.91	□□□□□ -0.18
PTPN7-215	ENST00000492451	TTC24	A2A3L6	582 aa	Predicted RBP	13.91	□□□□□ -0.18
PTPN7-215	ENST00000492451	CFAP69	A5D8W1	941 aa		13.91	□□□□□ -0.18
PTPN7-215	ENST00000492451	IGLON5	A6NGN9	336 aa		13.91	□□□□□ -0.18
PTPN7-215	ENST00000492451	HACD1	B0YJ81	288 aa		13.91	□□□□□ -0.18
PTPN7-215	ENST00000492451	SPINT1	O43278	529 aa		13.91	□□□□□ -0.18
PTPN7-215	ENST00000492451	OPHN1	O60890	802 aa		13.91	□□□□□ -0.18
PTPN7-215	ENST00000492451	TM7SF2	O76062	418 aa		13.91	□□□□□ -0.18
PTPN7-215	ENST00000492451	KCNK5	O95279	499 aa		13.91	□□□□□ -0.18
PTPN7-215	ENST00000492451	CP	P00450	1065 aa		13.91	□□□□□ -0.18
PTPN7-215	ENST00000492451	HLA-DQB2	P05538	268 aa		13.91	□□□□□ -0.18
PTPN7-215	ENST00000492451	PTMA	P06454	111 aa	Known RBP	13.91	□□□□□ -0.18
PTPN7-215	ENST00000492451	PYGM	P11217	842 aa		13.91	□□□□□ -0.18
PTPN7-215	ENST00000492451	PECAM1	P16284	738 aa	Predicted RBP	13.91	□□□□□ -0.18
PTPN7-215	ENST00000492451	PRLR	P16471	622 aa		13.91	□□□□□ -0.18
PTPN7-215	ENST00000492451	ADCY2	Q08462	1091 aa		13.91	□□□□□ -0.18
PTPN7-215	ENST00000492451	SLC14A1	Q13336	389 aa		13.91	□□□□□ -0.18
PTPN7-215	ENST00000492451	XRCC4	Q13426	336 aa		13.91	□□□□□ -0.18
PTPN7-215	ENST00000492451	PRKD1	Q15139	912 aa	Predicted RBP	13.91	□□□□□ -0.18
PTPN7-215	ENST00000492451	LLGL1	Q15334	1064 aa		13.91	□□□□□ -0.18
PTPN7-215	ENST00000492451	KIF19	Q2TAC6	998 aa		13.91	□□□□□ -0.18
PTPN7-215	ENST00000492451	LRRC73	Q5JTD7	316 aa		13.91	□□□□□ -0.18
PTPN7-215	ENST00000492451	ARMC12	Q5T9G4	340 aa		13.91	□□□□□ -0.18
PTPN7-215	ENST00000492451	ZSWIM9	Q86XI8	627 aa		13.91	□□□□□ -0.18
PTPN7-215	ENST00000492451	PDCD6IP	Q8WUM4	868 aa	Known RBP	13.91	□□□□□ -0.18
PTPN7-215	ENST00000492451	ALS2CR12	Q96Q35	445 aa		13.91	□□□□□ -0.18
PTPN7-215	ENST00000492451	FERMT1	Q9BQL6	677 aa		13.91	□□□□□ -0.18
PTPN7-215	ENST00000492451	LZTFL1	Q9NQ48	299 aa		13.91	□□□□□ -0.18
PTPN7-215	ENST00000492451	DNAAF2	Q9NVR5	837 aa	Known RBP	13.91	□□□□□ -0.18
PTPN7-215	ENST00000492451	SAE1	Q9UBE0	346 aa	Predicted RBP	13.91	□□□□□ -0.18
PTPN7-215	ENST00000492451	GGT7	Q9UJ14	662 aa		13.91	□□□□□ -0.18
PTPN7-215	ENST00000492451	PHTF1	Q9UMS5	762 aa		13.91	□□□□□ -0.18
PTPN7-215	ENST00000492451	PCDHB9	Q9Y5E1	797 aa		13.91	□□□□□ -0.18
PTPN7-215	ENST00000492451	SNX11	Q9Y5W9	270 aa		13.91	□□□□□ -0.18
PTPN7-215	ENST00000492451	HS3ST3A1	Q9Y663	406 aa		13.91	□□□□□ -0.18
PTPN7-215	ENST00000492451	GOLGA6L9	A6NEM1	432 aa		13.9	□□□□□ -0.18
PTPN7-215	ENST00000492451	TLR4	O00206	839 aa		13.9	□□□□□ -0.18
PTPN7-215	ENST00000492451	WNT9A	O14904	365 aa		13.9	□□□□□ -0.18
PTPN7-215	ENST00000492451	DDX3Y	O15523	660 aa	Known RBP	13.9	□□□□□ -0.18
PTPN7-215	ENST00000492451	MMP20	O60882	483 aa		13.9	□□□□□ -0.18
PTPN7-215	ENST00000492451	ZNF189	O75820	626 aa	Predicted RBP	13.9	□□□□□ -0.18
PTPN7-215	ENST00000492451	PGLS	O95336	258 aa		13.9	□□□□□ -0.18
PTPN7-215	ENST00000492451	PAK4	O96013	591 aa	Predicted RBP	13.9	□□□□□ -0.18
PTPN7-215	ENST00000492451	ZNF883	P0CG24	379 aa		13.9	□□□□□ -0.18
PTPN7-215	ENST00000492451	MMP12	P39900	470 aa		13.9	□□□□□ -0.18
PTPN7-215	ENST00000492451	CTSK	P43235	329 aa		13.9	□□□□□ -0.18
PTPN7-215	ENST00000492451	FAM193A	P78312	1265 aa		13.9	□□□□□ -0.18
PTPN7-215	ENST00000492451	BNC1	Q01954	994 aa		13.9	□□□□□ -0.18
PTPN7-215	ENST00000492451	DSC2	Q02487	901 aa		13.9	□□□□□ -0.18
PTPN7-215	ENST00000492451	TRAF2	Q12933	501 aa		13.9	□□□□□ -0.18
PTPN7-215	ENST00000492451	ZBTB17	Q13105	803 aa		13.9	□□□□□ -0.18
PTPN7-215	ENST00000492451	HLA-B	Q31612	363 aa		13.9	□□□□□ -0.18
PTPN7-215	ENST00000492451	UAP1L1	Q3KQV9	507 aa		13.9	□□□□□ -0.18
PTPN7-215	ENST00000492451	PSAPL1	Q6NUJ1	521 aa		13.9	□□□□□ -0.18
PTPN7-215	ENST00000492451	DCP2	Q8IU60	420 aa	Known RBP	13.9	□□□□□ -0.18
PTPN7-215	ENST00000492451	TMEM145	Q8NBT3	493 aa		13.9	□□□□□ -0.18
PTPN7-215	ENST00000492451	DENND6B	Q8NEG7	585 aa		13.9	□□□□□ -0.18
PTPN7-215	ENST00000492451	LRRN4	Q8WUT4	740 aa		13.9	□□□□□ -0.18
PTPN7-215	ENST00000492451	KLHDC7B	Q96G42	594 aa		13.9	□□□□□ -0.18
PTPN7-215	ENST00000492451	NSMCE3	Q96MG7	304 aa		13.9	□□□□□ -0.18
PTPN7-215	ENST00000492451	VAT1	Q99536	393 aa		13.9	□□□□□ -0.18
PTPN7-215	ENST00000492451	WRAP53	Q9BUR4	548 aa	Known RBP	13.9	□□□□□ -0.18
PTPN7-215	ENST00000492451	GAREM1	Q9H706	876 aa		13.9	□□□□□ -0.18
PTPN7-215	ENST00000492451	GDF3	Q9NR23	364 aa		13.9	□□□□□ -0.18
PTPN7-215	ENST00000492451	SEPT10	Q9P0V9	454 aa		13.9	□□□□□ -0.18
PTPN7-215	ENST00000492451	PACSIN2	Q9UNF0	486 aa	Predicted RBP	13.9	□□□□□ -0.18
PTPN7-215	ENST00000492451	PPP2R2C	Q9Y2T4	447 aa		13.9	□□□□□ -0.18
PTPN7-215	ENST00000492451	RAI2	Q9Y5P3	530 aa		13.9	□□□□□ -0.18
PTPN7-215	ENST00000492451	DOCK9	Q9BZ29	2069 aa		13.9	□□□□□ -0.18
PTPN7-215	ENST00000492451		A6NNZ2	444 aa		13.89	□□□□□ -0.19
PTPN7-215	ENST00000492451	FPGT	O14772	594 aa		13.89	□□□□□ -0.19
PTPN7-215	ENST00000492451	WNT1	P04628	370 aa		13.89	□□□□□ -0.19
PTPN7-215	ENST00000492451	ITIH2	P19823	946 aa		13.89	□□□□□ -0.19
PTPN7-215	ENST00000492451	LIG3	P49916	1009 aa		13.89	□□□□□ -0.19
PTPN7-215	ENST00000492451	NXPH1	P58417	271 aa		13.89	□□□□□ -0.19
PTPN7-215	ENST00000492451	RPL26	P61254	145 aa	Known RBP	13.89	□□□□□ -0.19
PTPN7-215	ENST00000492451	FGL2	Q14314	439 aa		13.89	□□□□□ -0.19
PTPN7-215	ENST00000492451	NOMO1	Q15155	1222 aa		13.89	□□□□□ -0.19
PTPN7-215	ENST00000492451	ZNF423	Q2M1K9	1284 aa		13.89	□□□□□ -0.19
PTPN7-215	ENST00000492451	TEX44	Q53QW1	395 aa		13.89	□□□□□ -0.19
PTPN7-215	ENST00000492451	LAYN	Q6UX15	382 aa		13.89	□□□□□ -0.19
PTPN7-215	ENST00000492451	USP45	Q70EL2	814 aa		13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 56 ms