RNA–Protein interactions for RNA: ENST00000492118.2

ATF3-209, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 2,103 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-209ENST00000492118 HIF1AQ16665 826 aa10.86□□□□□ -0.67
ATF3-209ENST00000492118 INO80DQ53TQ3 878 aaPredicted RBP10.86□□□□□ -0.67
ATF3-209ENST00000492118 CERCAMQ5T4B2 595 aa10.86□□□□□ -0.67
ATF3-209ENST00000492118 WDR93Q6P2C0 686 aa10.86□□□□□ -0.67
ATF3-209ENST00000492118 CAND1Q86VP6 1230 aaKnown RBP10.86□□□□□ -0.67
ATF3-209ENST00000492118 N4BP2L2Q92802 583 aaPredicted RBP10.86□□□□□ -0.67
ATF3-209ENST00000492118 TTC17Q96AE7 1141 aa10.86□□□□□ -0.67
ATF3-209ENST00000492118 RMDN1Q96DB5 314 aa10.86□□□□□ -0.67
ATF3-209ENST00000492118 IFT43Q96FT9 208 aa10.86□□□□□ -0.67
ATF3-209ENST00000492118 MRGPRX2Q96LB1 330 aa10.86□□□□□ -0.67
ATF3-209ENST00000492118 SERPINB12Q96P63 405 aa10.86□□□□□ -0.67
ATF3-209ENST00000492118 FCRL5Q96RD9 977 aa10.86□□□□□ -0.67
ATF3-209ENST00000492118 CD320Q9NPF0 282 aa10.86□□□□□ -0.67
ATF3-209ENST00000492118 IL1RAPL1Q9NZN1 696 aa10.86□□□□□ -0.67
ATF3-209ENST00000492118 CHMP2BQ9UQN3 213 aa10.86□□□□□ -0.67
ATF3-209ENST00000492118 FNDC3AQ9Y2H6 1198 aaKnown RBP10.86□□□□□ -0.67
ATF3-209ENST00000492118 PCDHB9Q9Y5E1 797 aa10.86□□□□□ -0.67
ATF3-209ENST00000492118 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.86□□□□□ -0.67
ATF3-209ENST00000492118 ANXA9O76027 345 aa10.85□□□□□ -0.67
ATF3-209ENST00000492118 ACSL3O95573 720 aa10.85□□□□□ -0.67
ATF3-209ENST00000492118 AP2A1O95782 977 aa10.85□□□□□ -0.67
ATF3-209ENST00000492118 SRFP11831 508 aa10.85□□□□□ -0.67
ATF3-209ENST00000492118 CTPS1P17812 591 aa10.85□□□□□ -0.67
ATF3-209ENST00000492118 MGAT1P26572 445 aa10.85□□□□□ -0.67
ATF3-209ENST00000492118 SLC8A1P32418 973 aa10.85□□□□□ -0.67
ATF3-209ENST00000492118 RECQLP46063 649 aaPredicted RBP10.85□□□□□ -0.67
ATF3-209ENST00000492118 GEMIN4P57678 1058 aaKnown RBP10.85□□□□□ -0.67
ATF3-209ENST00000492118 DMC1Q14565 340 aa10.85□□□□□ -0.67
ATF3-209ENST00000492118 RFTN1Q14699 578 aaPredicted RBP10.85□□□□□ -0.67
ATF3-209ENST00000492118 KIAA0907Q7Z7F0 614 aaPredicted RBP10.85□□□□□ -0.67
ATF3-209ENST00000492118 SRLQ86TD4 932 aa10.85□□□□□ -0.67
ATF3-209ENST00000492118 IGDCC3Q8IVU1 814 aa10.85□□□□□ -0.67
ATF3-209ENST00000492118 STK40Q8N2I9 435 aa10.85□□□□□ -0.67
ATF3-209ENST00000492118 AGGF1Q8N302 714 aaeCLIP10.85□□□□□ -0.67
ATF3-209ENST00000492118 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.85□□□□□ -0.67
ATF3-209ENST00000492118 ZNF557Q8N988 423 aaPredicted RBP10.85□□□□□ -0.67
ATF3-209ENST00000492118 LPCAT1Q8NF37 534 aa10.85□□□□□ -0.67
ATF3-209ENST00000492118 OR2AP1Q8NGE2 309 aa10.85□□□□□ -0.67
ATF3-209ENST00000492118 OR2A12Q8NGT7 310 aa10.85□□□□□ -0.67
ATF3-209ENST00000492118 CFAP36Q96G28 342 aa10.85□□□□□ -0.67
ATF3-209ENST00000492118 TBL1YQ9BQ87 522 aa10.85□□□□□ -0.67
ATF3-209ENST00000492118 SLC6A17Q9H1V8 727 aa10.85□□□□□ -0.67
ATF3-209ENST00000492118 QPCTLQ9NXS2 382 aa10.85□□□□□ -0.67
ATF3-209ENST00000492118 MTRF1LQ9UGC7 380 aaKnown RBP10.85□□□□□ -0.67
ATF3-209ENST00000492118 TBK1Q9UHD2 729 aa10.85□□□□□ -0.67
ATF3-209ENST00000492118 MUTYHQ9UIF7 546 aa10.85□□□□□ -0.67
ATF3-209ENST00000492118 MTF2Q9Y483 593 aaPredicted RBP10.85□□□□□ -0.67
ATF3-209ENST00000492118 RAI2Q9Y5P3 530 aa10.85□□□□□ -0.67
ATF3-209ENST00000492118 KIAA1549LQ6ZVL6 1849 aa10.85□□□□□ -0.67
ATF3-209ENST00000492118 MTRF1O75570 445 aaKnown RBP10.85□□□□□ -0.67
ATF3-209ENST00000492118 IGSF6O95976 241 aa10.85□□□□□ -0.67
ATF3-209ENST00000492118 DRG2P55039 364 aaKnown RBP10.85□□□□□ -0.67
ATF3-209ENST00000492118 GEMP55040 296 aa10.85□□□□□ -0.67
ATF3-209ENST00000492118 SNRPD1P62314 119 aaKnown RBP10.85□□□□□ -0.67
ATF3-209ENST00000492118 GRSF1Q12849 480 aaKnown RBP eCLIP10.85□□□□□ -0.67
ATF3-209ENST00000492118 TRAF2Q12933 501 aa10.85□□□□□ -0.67
ATF3-209ENST00000492118 SEPT6Q14141 434 aa10.85□□□□□ -0.67
ATF3-209ENST00000492118 ARSIQ5FYB1 569 aa10.85□□□□□ -0.67
ATF3-209ENST00000492118 FSTL4Q6MZW2 842 aa10.85□□□□□ -0.67
ATF3-209ENST00000492118 ZNF534Q76KX8 674 aa10.85□□□□□ -0.67
ATF3-209ENST00000492118 SIX5Q8N196 739 aa10.85□□□□□ -0.67
ATF3-209ENST00000492118 WFIKKN2Q8TEU8 576 aa10.85□□□□□ -0.67
ATF3-209ENST00000492118 UBLCP1Q8WVY7 318 aaPredicted RBP10.85□□□□□ -0.67
ATF3-209ENST00000492118 FAM3CQ92520 227 aa10.85□□□□□ -0.67
ATF3-209ENST00000492118 PTPRN2Q92932 1015 aa10.85□□□□□ -0.67
ATF3-209ENST00000492118 SEMA4AQ9H3S1 761 aa10.85□□□□□ -0.67
ATF3-209ENST00000492118 RAB21Q9UL25 225 aa10.85□□□□□ -0.67
ATF3-209ENST00000492118 SHOC2Q9UQ13 582 aa10.85□□□□□ -0.67
ATF3-209ENST00000492118 AAR2Q9Y312 384 aaKnown RBP10.85□□□□□ -0.67
ATF3-209ENST00000492118 GON4LQ3T8J9 2241 aa10.85□□□□□ -0.67
ATF3-209ENST00000492118 SDK1Q7Z5N4 2213 aa10.85□□□□□ -0.67
ATF3-209ENST00000492118 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.84□□□□□ -0.67
ATF3-209ENST00000492118 BHMG1C9JSJ3 638 aaPredicted RBP10.84□□□□□ -0.67
ATF3-209ENST00000492118 DNAJC6O75061 913 aa10.84□□□□□ -0.67
ATF3-209ENST00000492118 RNF40O75150 1001 aa10.84□□□□□ -0.67
ATF3-209ENST00000492118 SIN3BO75182 1162 aa10.84□□□□□ -0.67
ATF3-209ENST00000492118 LEFTY1O75610 366 aa10.84□□□□□ -0.67
ATF3-209ENST00000492118 ALPIP09923 528 aa10.84□□□□□ -0.67
ATF3-209ENST00000492118 ZNF24P17028 368 aa10.84□□□□□ -0.67
ATF3-209ENST00000492118 CR2P20023 1033 aa10.84□□□□□ -0.67
ATF3-209ENST00000492118 ELK3P41970 407 aa10.84□□□□□ -0.67
ATF3-209ENST00000492118 EPHB1P54762 984 aa10.84□□□□□ -0.67
ATF3-209ENST00000492118 ARL4CP56559 192 aa10.84□□□□□ -0.67
ATF3-209ENST00000492118 TAGLNQ01995 201 aaKnown RBP10.84□□□□□ -0.67
ATF3-209ENST00000492118 UBXN2BQ14CS0 331 aa10.84□□□□□ -0.67
ATF3-209ENST00000492118 BRD3Q15059 726 aa10.84□□□□□ -0.67
ATF3-209ENST00000492118 KYNUQ16719 465 aa10.84□□□□□ -0.67
ATF3-209ENST00000492118 MYLK3Q32MK0 819 aa10.84□□□□□ -0.67
ATF3-209ENST00000492118 CARD16Q5EG05 197 aa10.84□□□□□ -0.67
ATF3-209ENST00000492118 SIRPB2Q5JXA9 342 aa10.84□□□□□ -0.67
ATF3-209ENST00000492118 KCTD11Q693B1 232 aa10.84□□□□□ -0.67
ATF3-209ENST00000492118 KDELC1Q6UW63 502 aa10.84□□□□□ -0.67
ATF3-209ENST00000492118 Q6ZS52 159 aa10.84□□□□□ -0.67
ATF3-209ENST00000492118 PDIK1LQ8N165 341 aa10.84□□□□□ -0.67
ATF3-209ENST00000492118 ZCCHC9Q8N567 271 aaKnown RBP10.84□□□□□ -0.67
ATF3-209ENST00000492118 TXNDC5Q8NBS9 432 aaKnown RBP10.84□□□□□ -0.67
ATF3-209ENST00000492118 BBOF1Q8ND07 529 aa10.84□□□□□ -0.67
ATF3-209ENST00000492118 BLOC1S5Q8TDH9 187 aa10.84□□□□□ -0.67
ATF3-209ENST00000492118 UCMAQ8WVF2 138 aa10.84□□□□□ -0.67
ATF3-209ENST00000492118 NUDCD1Q96RS6 583 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms