RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 BBC3Q96PG8 261 aaPredicted RBP18.53■□□□□ 0.56
SMIM4-205ENST00000491607 BOCQ9BWV1 1114 aa18.53■□□□□ 0.56
SMIM4-205ENST00000491607 ATP8A1Q9Y2Q0 1164 aa18.53■□□□□ 0.56
SMIM4-205ENST00000491607 EME2A4GXA9 379 aaPredicted RBP18.52■□□□□ 0.56
SMIM4-205ENST00000491607 TMEM110-MUSTN1A8MSY1 372 aa18.52■□□□□ 0.56
SMIM4-205ENST00000491607 DDX3XO00571 662 aaKnown RBP eCLIP18.52■□□□□ 0.565e-7■■□□□ 14
SMIM4-205ENST00000491607 YY2O15391 372 aa18.52■□□□□ 0.56
SMIM4-205ENST00000491607 LRCH4O75427 683 aa18.52■□□□□ 0.56
SMIM4-205ENST00000491607 SERPINC1P01008 464 aa18.52■□□□□ 0.56
SMIM4-205ENST00000491607 CELA2BP08218 269 aaPredicted RBP18.52■□□□□ 0.56
SMIM4-205ENST00000491607 SKILP12757 684 aa18.52■□□□□ 0.56
SMIM4-205ENST00000491607 CTSEP14091 401 aa18.52■□□□□ 0.56
SMIM4-205ENST00000491607 MMP12P39900 470 aa18.52■□□□□ 0.56
SMIM4-205ENST00000491607 PRKCIP41743 596 aa18.52■□□□□ 0.56
SMIM4-205ENST00000491607 PEX5P50542 639 aa18.52■□□□□ 0.56
SMIM4-205ENST00000491607 BCL2L1Q07817 233 aa18.52■□□□□ 0.56
SMIM4-205ENST00000491607 INPP5AQ14642 412 aa18.52■□□□□ 0.56
SMIM4-205ENST00000491607 ACAP1Q15027 740 aa18.52■□□□□ 0.56
SMIM4-205ENST00000491607 ISXQ2M1V0 245 aa18.52■□□□□ 0.56
SMIM4-205ENST00000491607 PERM1Q5SV97 790 aa18.52■□□□□ 0.56
SMIM4-205ENST00000491607 AFMIDQ63HM1 303 aa18.52■□□□□ 0.56
SMIM4-205ENST00000491607 ESRP1Q6NXG1 681 aaKnown RBP18.52■□□□□ 0.56
SMIM4-205ENST00000491607 ENPP7Q6UWV6 458 aa18.52■□□□□ 0.56
SMIM4-205ENST00000491607 ARHGAP12Q8IWW6 846 aa18.52■□□□□ 0.56
SMIM4-205ENST00000491607 SLC35F3Q8IY50 421 aa18.52■□□□□ 0.56
SMIM4-205ENST00000491607 LSMEM2Q8N112 164 aa18.52■□□□□ 0.56
SMIM4-205ENST00000491607 FNIP1Q8TF40 1166 aa18.52■□□□□ 0.56
SMIM4-205ENST00000491607 TSACCQ96A04 125 aaPredicted RBP18.52■□□□□ 0.56
SMIM4-205ENST00000491607 TRIM11Q96F44 468 aa18.52■□□□□ 0.56
SMIM4-205ENST00000491607 NAF1Q96HR8 494 aaKnown RBP18.52■□□□□ 0.56
SMIM4-205ENST00000491607 LGMNQ99538 433 aa18.52■□□□□ 0.56
SMIM4-205ENST00000491607 APOOQ9BUR5 198 aa18.52■□□□□ 0.56
SMIM4-205ENST00000491607 CLPBQ9H078 707 aa18.52■□□□□ 0.56
SMIM4-205ENST00000491607 SYNDIG1Q9H7V2 258 aa18.52■□□□□ 0.56
SMIM4-205ENST00000491607 MRPL47Q9HD33 250 aaKnown RBP18.52■□□□□ 0.56
SMIM4-205ENST00000491607 OR1A2Q9Y585 309 aa18.52■□□□□ 0.56
SMIM4-205ENST00000491607 LOC400499M0QZD8 3231 aa18.52■□□□□ 0.55
SMIM4-205ENST00000491607 URB1O60287 2271 aaKnown RBP18.52■□□□□ 0.55
SMIM4-205ENST00000491607 A0A1B0GTH6 734 aa18.51■□□□□ 0.55
SMIM4-205ENST00000491607 CSNK1DP48730 415 aa18.51■□□□□ 0.55
SMIM4-205ENST00000491607 HK3P52790 923 aa18.51■□□□□ 0.55
SMIM4-205ENST00000491607 PCBP4P57723 403 aaKnown RBP18.51■□□□□ 0.55
SMIM4-205ENST00000491607 IL10RBQ08334 325 aa18.51■□□□□ 0.55
SMIM4-205ENST00000491607 NFATC4Q14934 902 aa18.51■□□□□ 0.55
SMIM4-205ENST00000491607 ELOCQ15369 112 aa18.51■□□□□ 0.55
SMIM4-205ENST00000491607 ALG11Q2TAA5 492 aa18.51■□□□□ 0.55
SMIM4-205ENST00000491607 CYP4V2Q6ZWL3 525 aaPredicted RBP18.51■□□□□ 0.55
SMIM4-205ENST00000491607 PSTKQ8IV42 348 aaKnown RBP18.51■□□□□ 0.55
SMIM4-205ENST00000491607 FSTL5Q8N475 847 aaPredicted RBP18.51■□□□□ 0.55
SMIM4-205ENST00000491607 ZNF248Q8NDW4 579 aa18.51■□□□□ 0.55
SMIM4-205ENST00000491607 TPCN2Q8NHX9 752 aa18.51■□□□□ 0.55
SMIM4-205ENST00000491607 SCG3Q8WXD2 468 aaKnown RBP18.51■□□□□ 0.55
SMIM4-205ENST00000491607 NAT6Q93015 286 aa18.51■□□□□ 0.55
SMIM4-205ENST00000491607 ZNF578Q96N58 590 aaPredicted RBP18.51■□□□□ 0.55
SMIM4-205ENST00000491607 FCRL3Q96P31 734 aaPredicted RBP18.51■□□□□ 0.55
SMIM4-205ENST00000491607 ZWILCHQ9H900 591 aa18.51■□□□□ 0.55
SMIM4-205ENST00000491607 POLR1BQ9H9Y6 1135 aa18.51■□□□□ 0.55
SMIM4-205ENST00000491607 CWC15Q9P013 229 aaKnown RBP18.51■□□□□ 0.55
SMIM4-205ENST00000491607 SIRPGQ9P1W8 387 aa18.51■□□□□ 0.55
SMIM4-205ENST00000491607 GULP1Q9UBP9 304 aa18.51■□□□□ 0.55
SMIM4-205ENST00000491607 KLQ9UEF7 1012 aa18.51■□□□□ 0.55
SMIM4-205ENST00000491607 RAI2Q9Y5P3 530 aa18.51■□□□□ 0.55
SMIM4-205ENST00000491607 RASGRP1O95267 797 aa18.5■□□□□ 0.55
SMIM4-205ENST00000491607 ALPIP09923 528 aa18.5■□□□□ 0.55
SMIM4-205ENST00000491607 MYBL1P10243 752 aa18.5■□□□□ 0.55
SMIM4-205ENST00000491607 LSSP48449 732 aa18.5■□□□□ 0.55
SMIM4-205ENST00000491607 SCNN1BP51168 640 aa18.5■□□□□ 0.55
SMIM4-205ENST00000491607 ZNF135P52742 658 aaPredicted RBP18.5■□□□□ 0.55
SMIM4-205ENST00000491607 POLR2LP62875 67 aaKnown RBP18.5■□□□□ 0.55
SMIM4-205ENST00000491607 RFTN1Q14699 578 aaPredicted RBP18.5■□□□□ 0.55
SMIM4-205ENST00000491607 SMTNL2Q2TAL5 461 aa18.5■□□□□ 0.55
SMIM4-205ENST00000491607 TDRD12Q587J7 1177 aaKnown RBP18.5■□□□□ 0.55
SMIM4-205ENST00000491607 C3orf38Q5JPI3 329 aa18.5■□□□□ 0.55
SMIM4-205ENST00000491607 RBM44Q6ZP01 1051 aaKnown RBP18.5■□□□□ 0.55
SMIM4-205ENST00000491607 ATL2Q8NHH9 583 aa18.5■□□□□ 0.55
SMIM4-205ENST00000491607 HSPH1Q92598 858 aa18.5■□□□□ 0.55
SMIM4-205ENST00000491607 ATXN7L3BQ96GX2 97 aa18.5■□□□□ 0.55
SMIM4-205ENST00000491607 CCDC3Q9BQI4 270 aa18.5■□□□□ 0.55
SMIM4-205ENST00000491607 EDEM3Q9BZQ6 932 aa18.5■□□□□ 0.55
SMIM4-205ENST00000491607 PRORYQ9H606 182 aa18.5■□□□□ 0.55
SMIM4-205ENST00000491607 PADI4Q9UM07 663 aa18.5■□□□□ 0.55
SMIM4-205ENST00000491607 SATB2Q9UPW6 733 aa18.5■□□□□ 0.55
SMIM4-205ENST00000491607 A8MX80 341 aa18.49■□□□□ 0.55
SMIM4-205ENST00000491607 H3BRJ5 948 aa18.49■□□□□ 0.55
SMIM4-205ENST00000491607 ELFN1P0C7U0 828 aa18.49■□□□□ 0.55
SMIM4-205ENST00000491607 ARL4AP40617 200 aa18.49■□□□□ 0.55
SMIM4-205ENST00000491607 HCAR3P49019 387 aa18.49■□□□□ 0.55
SMIM4-205ENST00000491607 SRP54P61011 504 aaKnown RBP18.49■□□□□ 0.55
SMIM4-205ENST00000491607 NSUN2Q08J23 767 aaKnown RBP eCLIP18.49■□□□□ 0.55
SMIM4-205ENST00000491607 MTM1Q13496 603 aa18.49■□□□□ 0.55
SMIM4-205ENST00000491607 DPYSQ14117 519 aa18.49■□□□□ 0.55
SMIM4-205ENST00000491607 LBRQ14739 615 aaKnown RBP18.49■□□□□ 0.55
SMIM4-205ENST00000491607 NR1I3Q14994 352 aa18.49■□□□□ 0.55
SMIM4-205ENST00000491607 AGERQ15109 404 aa18.49■□□□□ 0.55
SMIM4-205ENST00000491607 NYAP1Q6ZVC0 841 aa18.49■□□□□ 0.55
SMIM4-205ENST00000491607 SPACA3Q8IXA5 215 aa18.49■□□□□ 0.55
SMIM4-205ENST00000491607 TP53INP2Q8IXH6 220 aa18.49■□□□□ 0.55
SMIM4-205ENST00000491607 LZTR1Q8N653 840 aa18.49■□□□□ 0.55
SMIM4-205ENST00000491607 ARL10Q8N8L6 244 aa18.49■□□□□ 0.55
SMIM4-205ENST00000491607 PLA2G15Q8NCC3 412 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms