RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, human

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP188-208	ENST00000491502	HLA-F	P30511	346 aa		13.62	□□□□□ -0.23
NUP188-208	ENST00000491502	CSK	P41240	450 aa		13.62	□□□□□ -0.23
NUP188-208	ENST00000491502	ELK3	P41970	407 aa		13.62	□□□□□ -0.23
NUP188-208	ENST00000491502	MAGEA3	P43357	314 aa		13.62	□□□□□ -0.23
NUP188-208	ENST00000491502	NSUN2	Q08J23	767 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
NUP188-208	ENST00000491502	ENPP2	Q13822	863 aa		13.62	□□□□□ -0.23
NUP188-208	ENST00000491502	FNBP1L	Q5T0N5	605 aa		13.62	□□□□□ -0.23
NUP188-208	ENST00000491502	KCTD11	Q693B1	232 aa		13.62	□□□□□ -0.23
NUP188-208	ENST00000491502	CASC4	Q6P4E1	433 aa		13.62	□□□□□ -0.23
NUP188-208	ENST00000491502	C3orf62	Q6ZUJ4	267 aa		13.62	□□□□□ -0.23
NUP188-208	ENST00000491502	CAND1	Q86VP6	1230 aa	Known RBP	13.62	□□□□□ -0.23
NUP188-208	ENST00000491502	STAMBPL1	Q96FJ0	436 aa		13.62	□□□□□ -0.23
NUP188-208	ENST00000491502	IFT43	Q96FT9	208 aa		13.62	□□□□□ -0.23
NUP188-208	ENST00000491502	EBNA1BP2	Q99848	306 aa	Known RBP	13.62	□□□□□ -0.23
NUP188-208	ENST00000491502	DUSP15	Q9H1R2	295 aa	Predicted RBP	13.62	□□□□□ -0.23
NUP188-208	ENST00000491502	CASS4	Q9NQ75	786 aa		13.62	□□□□□ -0.23
NUP188-208	ENST00000491502	ABCB8	Q9NUT2	735 aa		13.62	□□□□□ -0.23
NUP188-208	ENST00000491502	CACNA2D2	Q9NY47	1150 aa		13.62	□□□□□ -0.23
NUP188-208	ENST00000491502	FETUB	Q9UGM5	382 aa		13.62	□□□□□ -0.23
NUP188-208	ENST00000491502	SLC25A13	Q9UJS0	675 aa		13.62	□□□□□ -0.23
NUP188-208	ENST00000491502	GGA2	Q9UJY4	613 aa		13.62	□□□□□ -0.23
NUP188-208	ENST00000491502	MAD1L1	Q9Y6D9	718 aa		13.62	□□□□□ -0.23
NUP188-208	ENST00000491502	TEX264	Q9Y6I9	313 aa		13.62	□□□□□ -0.23
NUP188-208	ENST00000491502	DMD	P11532	3685 aa		13.61	□□□□□ -0.23
NUP188-208	ENST00000491502	PRR5-ARHGAP8	B1AHC4	643 aa		13.61	□□□□□ -0.23
NUP188-208	ENST00000491502	RASGRF2	O14827	1237 aa		13.61	□□□□□ -0.23
NUP188-208	ENST00000491502	MAP3K13	O43283	966 aa		13.61	□□□□□ -0.23
NUP188-208	ENST00000491502	SYNCRIP	O60506	623 aa	Known RBP	13.61	□□□□□ -0.23
NUP188-208	ENST00000491502	ZNF217	O75362	1048 aa		13.61	□□□□□ -0.23
NUP188-208	ENST00000491502	EPN2	O95208	641 aa		13.61	□□□□□ -0.23
NUP188-208	ENST00000491502	EPO	P01588	193 aa		13.61	□□□□□ -0.23
NUP188-208	ENST00000491502	POLB	P06746	335 aa		13.61	□□□□□ -0.23
NUP188-208	ENST00000491502	GABRG2	P18507	467 aa		13.61	□□□□□ -0.23
NUP188-208	ENST00000491502	PGAM1	P18669	254 aa		13.61	□□□□□ -0.23
NUP188-208	ENST00000491502	POLR2E	P19388	210 aa	Known RBP	13.61	□□□□□ -0.23
NUP188-208	ENST00000491502	SDHB	P21912	280 aa		13.61	□□□□□ -0.23
NUP188-208	ENST00000491502	P2RY2	P41231	377 aa		13.61	□□□□□ -0.23
NUP188-208	ENST00000491502	ARHGAP8	P85298	464 aa		13.61	□□□□□ -0.23
NUP188-208	ENST00000491502	ZNF234	Q14588	700 aa		13.61	□□□□□ -0.23
NUP188-208	ENST00000491502	CSRP2	Q16527	193 aa		13.61	□□□□□ -0.23
NUP188-208	ENST00000491502	PLEKHG6	Q3KR16	790 aa		13.61	□□□□□ -0.23
NUP188-208	ENST00000491502	KRT71	Q3SY84	523 aa		13.61	□□□□□ -0.23
NUP188-208	ENST00000491502	ALG1L	Q6GMV1	187 aa		13.61	□□□□□ -0.23
NUP188-208	ENST00000491502	CYS1	Q717R9	158 aa		13.61	□□□□□ -0.23
NUP188-208	ENST00000491502	ANKMY2	Q8IV38	441 aa		13.61	□□□□□ -0.23
NUP188-208	ENST00000491502	RIBC1	Q8N443	379 aa	Predicted RBP	13.61	□□□□□ -0.23
NUP188-208	ENST00000491502	IPMK	Q8NFU5	416 aa		13.61	□□□□□ -0.23
NUP188-208	ENST00000491502	GABPB2	Q8TAK5	448 aa	Predicted RBP	13.61	□□□□□ -0.23
NUP188-208	ENST00000491502	PTCD2	Q8WV60	388 aa	Known RBP	13.61	□□□□□ -0.23
NUP188-208	ENST00000491502	PWWP2A	Q96N64	755 aa		13.61	□□□□□ -0.23
NUP188-208	ENST00000491502	CYTH2	Q99418	400 aa		13.61	□□□□□ -0.23
NUP188-208	ENST00000491502	MGME1	Q9BQP7	344 aa		13.61	□□□□□ -0.23
NUP188-208	ENST00000491502	MLPH	Q9BV36	600 aa	Predicted RBP	13.61	□□□□□ -0.23
NUP188-208	ENST00000491502	SCUBE2	Q9NQ36	999 aa		13.61	□□□□□ -0.23
NUP188-208	ENST00000491502	CHMP2B	Q9UQN3	213 aa		13.61	□□□□□ -0.23
NUP188-208	ENST00000491502	IKBKG	Q9Y6K9	419 aa		13.61	□□□□□ -0.23
NUP188-208	ENST00000491502	EML5	Q05BV3	1969 aa		13.61	□□□□□ -0.23
NUP188-208	ENST00000491502	EXOC1L	A0A1B0GW35	172 aa		13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	HMGB1P1	B2RPK0	211 aa	Predicted RBP	13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	WASH3P	C4AMC7	463 aa		13.6	□□□□□ -0.23
NUP188-208	ENST00000491502		F5H423	210 aa	Predicted RBP	13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	ASL	P04424	464 aa		13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	DLD	P09622	509 aa	Known RBP	13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	TGM1	P22735	817 aa		13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	MZF1	P28698	734 aa	Predicted RBP	13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	NNMT	P40261	264 aa		13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	CD86	P42081	329 aa		13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	IL12RB1	P42701	662 aa		13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	WNT3A	P56704	352 aa		13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	SESN2	P58004	480 aa	Predicted RBP	13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	SPEM2	Q0P670	501 aa		13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	LMAN2	Q12907	356 aa		13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	MAP7D1	Q3KQU3	841 aa		13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	FSCB	Q5H9T9	825 aa		13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	SYCP2L	Q5T4T6	812 aa		13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	TMEM215	Q68D42	235 aa		13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	MBLAC2	Q68D91	279 aa		13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	ZNF449	Q6P9G9	518 aa		13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	SERPINA13P	Q6UXR4	307 aa		13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	SLC36A4	Q6YBV0	504 aa		13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	ADIPOR2	Q86V24	386 aa		13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	CDKL2	Q92772	493 aa		13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	TTC17	Q96AE7	1141 aa		13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	OXNAD1	Q96HP4	312 aa	Predicted RBP	13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	SIGLEC10	Q96LC7	697 aa		13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	NUDCD1	Q96RS6	583 aa		13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	SH3GL2	Q99962	352 aa		13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	SEMA3C	Q99985	751 aa		13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	ARRDC1-AS1	Q9H2J1	176 aa		13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	LRRC4C	Q9HCJ2	640 aa		13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	CD248	Q9HCU0	757 aa		13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	SEMA4G	Q9NTN9	838 aa		13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	SUN2	Q9UH99	717 aa		13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	SLC24A2	Q9UI40	661 aa		13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	VPS51	Q9UID3	782 aa		13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	INVS	Q9Y283	1065 aa		13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	OR51B4	Q9Y5P0	310 aa		13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	NFS1	Q9Y697	457 aa		13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	13.6	□□□□□ -0.23
NUP188-208	ENST00000491502	RALGAPA1	Q6GYQ0	2036 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms