RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 NSMCE3Q96MG7 304 aa31.6■■■□□ 2.65
LDB1-204ENST00000490751 ZNHIT6Q9NWK9 470 aaKnown RBP31.6■■■□□ 2.65
LDB1-204ENST00000490751 SSU72P8A0A1W2PR75 194 aa31.59■■■□□ 2.65
LDB1-204ENST00000490751 SCAMP1O15126 338 aa31.59■■■□□ 2.65
LDB1-204ENST00000490751 MAFKO60675 156 aa31.59■■■□□ 2.65
LDB1-204ENST00000490751 PROSCO94903 275 aa31.59■■■□□ 2.65
LDB1-204ENST00000490751 IL4RP24394 825 aa31.59■■■□□ 2.65
LDB1-204ENST00000490751 HNF1BP35680 557 aa31.59■■■□□ 2.65
LDB1-204ENST00000490751 LIG3P49916 1009 aa31.59■■■□□ 2.65
LDB1-204ENST00000490751 CAMK2BQ13554 666 aa31.59■■■□□ 2.65
LDB1-204ENST00000490751 LRRC14Q15048 493 aa31.59■■■□□ 2.65
LDB1-204ENST00000490751 FAM71BQ8TC56 605 aa31.59■■■□□ 2.65
LDB1-204ENST00000490751 ABHD10Q9NUJ1 306 aa31.59■■■□□ 2.65
LDB1-204ENST00000490751 TTC24A2A3L6 582 aaPredicted RBP31.58■■■□□ 2.65
LDB1-204ENST00000490751 TAF4O00268 1085 aa31.58■■■□□ 2.65
LDB1-204ENST00000490751 TOR1BO14657 336 aa31.58■■■□□ 2.65
LDB1-204ENST00000490751 TPM1P09493 284 aa31.58■■■□□ 2.65
LDB1-204ENST00000490751 JUPP14923 745 aa31.58■■■□□ 2.65
LDB1-204ENST00000490751 HSPA9P38646 679 aaKnown RBP31.58■■■□□ 2.65
LDB1-204ENST00000490751 TSR1Q2NL82 804 aaKnown RBP31.58■■■□□ 2.65
LDB1-204ENST00000490751 WSCD2Q2TBF2 565 aa31.58■■■□□ 2.65
LDB1-204ENST00000490751 ATP13A4Q4VNC1 1196 aa31.58■■■□□ 2.65
LDB1-204ENST00000490751 HES3Q5TGS1 186 aa31.58■■■□□ 2.65
LDB1-204ENST00000490751 TRABD2BA6NFA1 517 aa31.57■■■□□ 2.64
LDB1-204ENST00000490751 K7ESM1 405 aa31.57■■■□□ 2.64
LDB1-204ENST00000490751 TRAFD1O14545 582 aaPredicted RBP31.57■■■□□ 2.64
LDB1-204ENST00000490751 AKR1B10O60218 316 aa31.57■■■□□ 2.64
LDB1-204ENST00000490751 LZTS3O60299 673 aaPredicted RBP31.57■■■□□ 2.64
LDB1-204ENST00000490751 ARSEP51690 589 aa31.57■■■□□ 2.64
LDB1-204ENST00000490751 MACC1Q6ZN28 852 aa31.57■■■□□ 2.64
LDB1-204ENST00000490751 RBFAQ8N0V3 343 aa31.57■■■□□ 2.64
LDB1-204ENST00000490751 BBS5Q8N3I7 341 aa31.57■■■□□ 2.64
LDB1-204ENST00000490751 PGBD5Q8N414 524 aa31.57■■■□□ 2.64
LDB1-204ENST00000490751 NSMCE1Q8WV22 266 aa31.57■■■□□ 2.64
LDB1-204ENST00000490751 APOLD1Q96LR9 279 aa31.57■■■□□ 2.64
LDB1-204ENST00000490751 DUSP23Q9BVJ7 150 aa31.57■■■□□ 2.64
LDB1-204ENST00000490751 CSNK1G3Q9Y6M4 447 aa31.57■■■□□ 2.64
LDB1-204ENST00000490751 MYLKQ15746 1914 aa31.56■■■□□ 2.64
LDB1-204ENST00000490751 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP31.56■■■□□ 2.64
LDB1-204ENST00000490751 AQP9O43315 295 aa31.56■■■□□ 2.64
LDB1-204ENST00000490751 CR2P20023 1033 aa31.56■■■□□ 2.64
LDB1-204ENST00000490751 POLR2LP62875 67 aaKnown RBP31.56■■■□□ 2.64
LDB1-204ENST00000490751 RALGDSQ12967 914 aa31.56■■■□□ 2.64
LDB1-204ENST00000490751 DPYSL3Q14195 570 aa31.56■■■□□ 2.64
LDB1-204ENST00000490751 LMX1AQ8TE12 382 aa31.56■■■□□ 2.64
LDB1-204ENST00000490751 BTN2A2Q8WVV5 523 aa31.56■■■□□ 2.64
LDB1-204ENST00000490751 NUDCD1Q96RS6 583 aa31.56■■■□□ 2.64
LDB1-204ENST00000490751 CHP1Q99653 195 aa31.56■■■□□ 2.64
LDB1-204ENST00000490751 TCEAL2Q9H3H9 227 aaPredicted RBP31.56■■■□□ 2.64
LDB1-204ENST00000490751 APOBEC3BQ9UH17 382 aaKnown RBP31.56■■■□□ 2.64
LDB1-204ENST00000490751 PNMA8BQ9ULN7 279 aaPredicted RBP31.56■■■□□ 2.64
LDB1-204ENST00000490751 FREM2Q5SZK8 3169 aa31.56■■■□□ 2.64
LDB1-204ENST00000490751 MFSD11O43934 449 aa31.55■■■□□ 2.64
LDB1-204ENST00000490751 MFAP3LO75121 409 aa31.55■■■□□ 2.64
LDB1-204ENST00000490751 TMEM253P0C7T8 217 aa31.55■■■□□ 2.64
LDB1-204ENST00000490751 CKMT1AP12532 417 aa31.55■■■□□ 2.64
LDB1-204ENST00000490751 MYF5P13349 255 aa31.55■■■□□ 2.64
LDB1-204ENST00000490751 ADKP55263 362 aaKnown RBP31.55■■■□□ 2.64
LDB1-204ENST00000490751 TAS2R40P59535 323 aa31.55■■■□□ 2.64
LDB1-204ENST00000490751 AGERQ15109 404 aa31.55■■■□□ 2.64
LDB1-204ENST00000490751 PHACTR4Q8IZ21 702 aa31.55■■■□□ 2.64
LDB1-204ENST00000490751 PDCD7Q8N8D1 485 aaKnown RBP31.55■■■□□ 2.64
LDB1-204ENST00000490751 MGME1Q9BQP7 344 aa31.55■■■□□ 2.64
LDB1-204ENST00000490751 SCUBE2Q9NQ36 999 aa31.55■■■□□ 2.64
LDB1-204ENST00000490751 CFAP69A5D8W1 941 aa31.54■■■□□ 2.64
LDB1-204ENST00000490751 MMP13P45452 471 aa31.54■■■□□ 2.64
LDB1-204ENST00000490751 MAXP61244 160 aa31.54■■■□□ 2.64
LDB1-204ENST00000490751 MARC1Q5VT66 337 aa31.54■■■□□ 2.64
LDB1-204ENST00000490751 DPPA4Q7L190 304 aa31.54■■■□□ 2.64
LDB1-204ENST00000490751 FAM181AQ8N9Y4 354 aa31.54■■■□□ 2.64
LDB1-204ENST00000490751 KCTD6Q8NC69 237 aa31.54■■■□□ 2.64
LDB1-204ENST00000490751 ZNF670Q9BS34 389 aa31.54■■■□□ 2.64
LDB1-204ENST00000490751 SPASTQ9UBP0 616 aa31.54■■■□□ 2.64
LDB1-204ENST00000490751 LCMT1Q9UIC8 334 aa31.54■■■□□ 2.64
LDB1-204ENST00000490751 PCDHGC4Q9Y5F7 938 aa31.54■■■□□ 2.64
LDB1-204ENST00000490751 LY6G6EA0A0G2JKS1 128 aa31.53■■■□□ 2.64
LDB1-204ENST00000490751 TMEM110-MUSTN1A8MSY1 372 aa31.53■■■□□ 2.64
LDB1-204ENST00000490751 SOCS5O75159 536 aa31.53■■■□□ 2.64
LDB1-204ENST00000490751 PCCBP05166 539 aa31.53■■■□□ 2.64
LDB1-204ENST00000490751 ELFN1P0C7U0 828 aa31.53■■■□□ 2.64
LDB1-204ENST00000490751 PEX5P50542 639 aa31.53■■■□□ 2.64
LDB1-204ENST00000490751 INSM1Q01101 510 aaPredicted RBP31.53■■■□□ 2.64
LDB1-204ENST00000490751 TARDBPQ13148 414 aaKnown RBP eCLIP31.53■■■□□ 2.647e-8■■■■□ 22.6
LDB1-204ENST00000490751 DEFB133Q30KQ1 61 aa31.53■■■□□ 2.64
LDB1-204ENST00000490751 NCBP2-AS2Q69YL0 99 aa31.53■■■□□ 2.64
LDB1-204ENST00000490751 ZCCHC8Q6NZY4 707 aaKnown RBP31.53■■■□□ 2.64
LDB1-204ENST00000490751 LIPIQ6XZB0 460 aa31.53■■■□□ 2.64
LDB1-204ENST00000490751 PCDH19Q8TAB3 1148 aa31.53■■■□□ 2.64
LDB1-204ENST00000490751 RFFLQ8WZ73 363 aa31.53■■■□□ 2.64
LDB1-204ENST00000490751 NOD2Q9HC29 1040 aa31.53■■■□□ 2.64
LDB1-204ENST00000490751 SPTLC3Q9NUV7 552 aa31.53■■■□□ 2.64
LDB1-204ENST00000490751 U3KQA8 63 aa31.53■■■□□ 2.64
LDB1-204ENST00000490751 DMXL2Q8TDJ6 3036 aa31.53■■■□□ 2.64
LDB1-204ENST00000490751 ZZEF1O43149 2961 aa31.53■■■□□ 2.64
LDB1-204ENST00000490751 KNTC1P50748 2209 aa31.52■■■□□ 2.64
LDB1-204ENST00000490751 HTRA2O43464 458 aaPredicted RBP31.52■■■□□ 2.64
LDB1-204ENST00000490751 KRT7P08729 469 aa31.52■■■□□ 2.64
LDB1-204ENST00000490751 MAN1A1P33908 653 aa31.52■■■□□ 2.64
LDB1-204ENST00000490751 E2F1Q01094 437 aa31.52■■■□□ 2.64
LDB1-204ENST00000490751 INPP5AQ14642 412 aa31.52■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms