RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 HTRA2O43464 458 aaPredicted RBP11.02□□□□□ -0.65
VARS2-210ENST00000490699 LAMTOR5O43504 91 aa11.02□□□□□ -0.65
VARS2-210ENST00000490699 ZNF217O75362 1048 aa11.02□□□□□ -0.65
VARS2-210ENST00000490699 RNASEH2AO75792 299 aaKnown RBP11.02□□□□□ -0.65
VARS2-210ENST00000490699 CRTAMO95727 393 aa11.02□□□□□ -0.65
VARS2-210ENST00000490699 MMP2P08253 660 aa11.02□□□□□ -0.65
VARS2-210ENST00000490699 OXTRP30559 389 aa11.02□□□□□ -0.65
VARS2-210ENST00000490699 GKP32189 559 aa11.02□□□□□ -0.65
VARS2-210ENST00000490699 NPY2RP49146 381 aa11.02□□□□□ -0.65
VARS2-210ENST00000490699 RPS14P62263 151 aaKnown RBP11.02□□□□□ -0.65
VARS2-210ENST00000490699 GALNT3Q14435 633 aa11.02□□□□□ -0.65
VARS2-210ENST00000490699 SPARCL1Q14515 664 aa11.02□□□□□ -0.65
VARS2-210ENST00000490699 SLC1A5Q15758 541 aa11.02□□□□□ -0.65
VARS2-210ENST00000490699 POM121L1PQ3SYA9 428 aa11.02□□□□□ -0.65
VARS2-210ENST00000490699 MAP9Q49MG5 647 aa11.02□□□□□ -0.65
VARS2-210ENST00000490699 RNASEH2BQ5TBB1 312 aaKnown RBP11.02□□□□□ -0.65
VARS2-210ENST00000490699 ARMC3Q5W041 872 aa11.02□□□□□ -0.65
VARS2-210ENST00000490699 ANO7Q6IWH7 933 aa11.02□□□□□ -0.65
VARS2-210ENST00000490699 HIBCHQ6NVY1 386 aaPredicted RBP11.02□□□□□ -0.65
VARS2-210ENST00000490699 CASC4Q6P4E1 433 aa11.02□□□□□ -0.65
VARS2-210ENST00000490699 LRRC8BQ6P9F7 803 aa11.02□□□□□ -0.65
VARS2-210ENST00000490699 USP30Q70CQ3 517 aa11.02□□□□□ -0.65
VARS2-210ENST00000490699 ERN2Q76MJ5 926 aaKnown RBP11.02□□□□□ -0.65
VARS2-210ENST00000490699 ZNF687Q8N1G0 1237 aa11.02□□□□□ -0.65
VARS2-210ENST00000490699 HDDC3Q8N4P3 179 aa11.02□□□□□ -0.65
VARS2-210ENST00000490699 PPHLN1Q8NEY8 458 aaKnown RBP11.02□□□□□ -0.65
VARS2-210ENST00000490699 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.02□□□□□ -0.65
VARS2-210ENST00000490699 TADA1Q96BN2 335 aa11.02□□□□□ -0.65
VARS2-210ENST00000490699 ERLEC1Q96DZ1 483 aa11.02□□□□□ -0.65
VARS2-210ENST00000490699 MRGPRX2Q96LB1 330 aa11.02□□□□□ -0.65
VARS2-210ENST00000490699 FAM129BQ96TA1 746 aa11.02□□□□□ -0.65
VARS2-210ENST00000490699 FMO2Q99518 471 aa11.02□□□□□ -0.65
VARS2-210ENST00000490699 HDAC8Q9BY41 377 aa11.02□□□□□ -0.65
VARS2-210ENST00000490699 IL22Q9GZX6 179 aa11.02□□□□□ -0.65
VARS2-210ENST00000490699 PABPC3Q9H361 631 aaKnown RBP11.02□□□□□ -0.65
VARS2-210ENST00000490699 TRABDQ9H4I3 376 aa11.02□□□□□ -0.65
VARS2-210ENST00000490699 FBXL12Q9NXK8 326 aa11.02□□□□□ -0.65
VARS2-210ENST00000490699 HCN2Q9UL51 889 aa11.02□□□□□ -0.65
VARS2-210ENST00000490699 FZD4Q9ULV1 537 aa11.02□□□□□ -0.65
VARS2-210ENST00000490699 LOC285095A0A1B0GVY8 99 aa11.01□□□□□ -0.65
VARS2-210ENST00000490699 ESYT3A0FGR9 886 aa11.01□□□□□ -0.65
VARS2-210ENST00000490699 TSPAN11A1L157 253 aa11.01□□□□□ -0.65
VARS2-210ENST00000490699 C2orf81A6NN90 581 aa11.01□□□□□ -0.65
VARS2-210ENST00000490699 ANKRD66B4E2M5 251 aa11.01□□□□□ -0.65
VARS2-210ENST00000490699 EIF3HO15372 352 aaKnown RBP eCLIP11.01□□□□□ -0.651e-8■■■□□ 15.2
VARS2-210ENST00000490699 USP12O75317 370 aa11.01□□□□□ -0.65
VARS2-210ENST00000490699 PPFIA2O75334 1257 aa11.01□□□□□ -0.65
VARS2-210ENST00000490699 ERLIN1O75477 346 aa11.01□□□□□ -0.65
VARS2-210ENST00000490699 GJB3O75712 270 aa11.01□□□□□ -0.65
VARS2-210ENST00000490699 AGTP01019 485 aa11.01□□□□□ -0.65
VARS2-210ENST00000490699 CTSLP07711 333 aa11.01□□□□□ -0.65
VARS2-210ENST00000490699 ADRB3P13945 408 aa11.01□□□□□ -0.65
VARS2-210ENST00000490699 COPAP53621 1224 aa11.01□□□□□ -0.65
VARS2-210ENST00000490699 FAM193AP78312 1265 aa11.01□□□□□ -0.65
VARS2-210ENST00000490699 MTAPQ13126 283 aa11.01□□□□□ -0.65
VARS2-210ENST00000490699 SEPT6Q14141 434 aa11.01□□□□□ -0.65
VARS2-210ENST00000490699 UGP2Q16851 508 aa11.01□□□□□ -0.65
VARS2-210ENST00000490699 SIRPB2Q5JXA9 342 aa11.01□□□□□ -0.65
VARS2-210ENST00000490699 KCTD11Q693B1 232 aa11.01□□□□□ -0.65
VARS2-210ENST00000490699 CWF19L1Q69YN2 538 aaKnown RBP11.01□□□□□ -0.65
VARS2-210ENST00000490699 KIAA1211LQ6NV74 962 aa11.01□□□□□ -0.65
VARS2-210ENST00000490699 NLRP9Q7RTR0 991 aa11.01□□□□□ -0.65
VARS2-210ENST00000490699 GLT6D1Q7Z4J2 308 aa11.01□□□□□ -0.65
VARS2-210ENST00000490699 CCDC25Q86WR0 208 aa11.01□□□□□ -0.65
VARS2-210ENST00000490699 KLHDC8BQ8IXV7 354 aa11.01□□□□□ -0.65
VARS2-210ENST00000490699 FBXL6Q8N531 539 aa11.01□□□□□ -0.65
VARS2-210ENST00000490699 ZCCHC9Q8N567 271 aaKnown RBP11.01□□□□□ -0.65
VARS2-210ENST00000490699 NAT8LQ8N9F0 302 aa11.01□□□□□ -0.65
VARS2-210ENST00000490699 EIF1ADQ8N9N8 165 aaKnown RBP11.01□□□□□ -0.65
VARS2-210ENST00000490699 OR52K1Q8NGK4 314 aa11.01□□□□□ -0.65
VARS2-210ENST00000490699 GABPB2Q8TAK5 448 aaPredicted RBP11.01□□□□□ -0.65
VARS2-210ENST00000490699 BLOC1S5Q8TDH9 187 aa11.01□□□□□ -0.65
VARS2-210ENST00000490699 ECHDC3Q96DC8 303 aa11.01□□□□□ -0.65
VARS2-210ENST00000490699 LRRC39Q96DD0 335 aa11.01□□□□□ -0.65
VARS2-210ENST00000490699 MRGPRX1Q96LB2 322 aa11.01□□□□□ -0.65
VARS2-210ENST00000490699 HHIPQ96QV1 700 aa11.01□□□□□ -0.65
VARS2-210ENST00000490699 APOL2Q9BQE5 337 aa11.01□□□□□ -0.65
VARS2-210ENST00000490699 NAT9Q9BTE0 207 aa11.01□□□□□ -0.65
VARS2-210ENST00000490699 GPR63Q9BZJ6 419 aa11.01□□□□□ -0.65
VARS2-210ENST00000490699 RAD18Q9NS91 495 aa11.01□□□□□ -0.65
VARS2-210ENST00000490699 DMGDHQ9UI17 866 aaKnown RBP11.01□□□□□ -0.65
VARS2-210ENST00000490699 PKP3Q9Y446 797 aa11.01□□□□□ -0.65
VARS2-210ENST00000490699 A0A0J9YYE9 177 aa11□□□□□ -0.65
VARS2-210ENST00000490699 A0A1W2PP55 124 aa11□□□□□ -0.65
VARS2-210ENST00000490699 MAGEB16A2A368 324 aa11□□□□□ -0.65
VARS2-210ENST00000490699 HEATR9A2RTY3 570 aa11□□□□□ -0.65
VARS2-210ENST00000490699 CAPN8A6NHC0 703 aa11□□□□□ -0.65
VARS2-210ENST00000490699 LRRC72A6NJI9 287 aa11□□□□□ -0.65
VARS2-210ENST00000490699 SDR42E2A6NKP2 422 aa11□□□□□ -0.65
VARS2-210ENST00000490699 TRAFD1O14545 582 aaPredicted RBP11□□□□□ -0.65
VARS2-210ENST00000490699 TSPAN6O43657 245 aa11□□□□□ -0.65
VARS2-210ENST00000490699 TRBC1P01850 177 aa11□□□□□ -0.65
VARS2-210ENST00000490699 SLC4A1P02730 911 aa11□□□□□ -0.65
VARS2-210ENST00000490699 ZNF30P17039 623 aa11□□□□□ -0.65
VARS2-210ENST00000490699 GABRG2P18507 467 aa11□□□□□ -0.65
VARS2-210ENST00000490699 PAMP19021 973 aa11□□□□□ -0.65
VARS2-210ENST00000490699 NDUFV2P19404 249 aa11□□□□□ -0.65
VARS2-210ENST00000490699 COL9A1P20849 921 aa11□□□□□ -0.65
VARS2-210ENST00000490699 VIPR1P32241 457 aa11□□□□□ -0.65
VARS2-210ENST00000490699 ADRA1AP35348 466 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms