RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101	GOLGA6C	A6NDK9	693 aa		18.35	■□□□□ 0.53
SRM-206	ENST00000490101	GOLGA6B	A6NDN3	693 aa		18.35	■□□□□ 0.53
SRM-206	ENST00000490101	MUSK	O15146	869 aa		18.35	■□□□□ 0.53
SRM-206	ENST00000490101	TMCC1	O94876	653 aa		18.35	■□□□□ 0.53
SRM-206	ENST00000490101	SUN1	O94901	812 aa		18.35	■□□□□ 0.53
SRM-206	ENST00000490101	AP2A1	O95782	977 aa		18.35	■□□□□ 0.53
SRM-206	ENST00000490101	CFI	P05156	583 aa		18.35	■□□□□ 0.53
SRM-206	ENST00000490101	GOLGA6D	P0CG33	693 aa		18.35	■□□□□ 0.53
SRM-206	ENST00000490101	CES1	P23141	567 aa		18.35	■□□□□ 0.53
SRM-206	ENST00000490101	SERPINH1	P50454	418 aa	Known RBP	18.35	■□□□□ 0.53
SRM-206	ENST00000490101	VASP	P50552	380 aa	Predicted RBP	18.35	■□□□□ 0.53
SRM-206	ENST00000490101	GEM	P55040	296 aa		18.35	■□□□□ 0.53
SRM-206	ENST00000490101	NIPAL4	Q0D2K0	466 aa		18.35	■□□□□ 0.53
SRM-206	ENST00000490101	BEND6	Q5SZJ8	279 aa	Predicted RBP	18.35	■□□□□ 0.53
SRM-206	ENST00000490101	MBLAC2	Q68D91	279 aa		18.35	■□□□□ 0.53
SRM-206	ENST00000490101	KCTD11	Q693B1	232 aa		18.35	■□□□□ 0.53
SRM-206	ENST00000490101	KIAA1211L	Q6NV74	962 aa		18.35	■□□□□ 0.53
SRM-206	ENST00000490101	LINGO4	Q6UY18	593 aa		18.35	■□□□□ 0.53
SRM-206	ENST00000490101	PPP1R21	Q6ZMI0	780 aa		18.35	■□□□□ 0.53
SRM-206	ENST00000490101	CEP128	Q6ZU80	1094 aa		18.35	■□□□□ 0.53
SRM-206	ENST00000490101	TSEN2	Q8NCE0	465 aa	Known RBP	18.35	■□□□□ 0.53
SRM-206	ENST00000490101	ARRDC2	Q8TBH0	407 aa		18.35	■□□□□ 0.53
SRM-206	ENST00000490101	TADA1	Q96BN2	335 aa		18.35	■□□□□ 0.53
SRM-206	ENST00000490101	OXNAD1	Q96HP4	312 aa	Predicted RBP	18.35	■□□□□ 0.53
SRM-206	ENST00000490101	MLPH	Q9BV36	600 aa	Predicted RBP	18.35	■□□□□ 0.53
SRM-206	ENST00000490101	CINP	Q9BW66	212 aa	Predicted RBP	18.35	■□□□□ 0.53
SRM-206	ENST00000490101	PHACTR1	Q9C0D0	580 aa		18.35	■□□□□ 0.53
SRM-206	ENST00000490101	ARFGAP3	Q9NP61	516 aa		18.35	■□□□□ 0.53
SRM-206	ENST00000490101	CACNA2D2	Q9NY47	1150 aa		18.35	■□□□□ 0.53
SRM-206	ENST00000490101	GOLGA6A	Q9NYA3	693 aa		18.35	■□□□□ 0.53
SRM-206	ENST00000490101	EVL	Q9UI08	416 aa	Predicted RBP	18.35	■□□□□ 0.53
SRM-206	ENST00000490101	HS3ST2	Q9Y278	367 aa		18.35	■□□□□ 0.53
SRM-206	ENST00000490101	AAR2	Q9Y312	384 aa	Known RBP	18.35	■□□□□ 0.53
SRM-206	ENST00000490101	STARD13	Q9Y3M8	1113 aa		18.35	■□□□□ 0.53
SRM-206	ENST00000490101		F5H423	210 aa	Predicted RBP	18.34	■□□□□ 0.53
SRM-206	ENST00000490101	PPFIA2	O75334	1257 aa		18.34	■□□□□ 0.53
SRM-206	ENST00000490101	MT-CO1	P00395	513 aa		18.34	■□□□□ 0.53
SRM-206	ENST00000490101	ASL	P04424	464 aa		18.34	■□□□□ 0.53
SRM-206	ENST00000490101	POLR2E	P19388	210 aa	Known RBP	18.34	■□□□□ 0.53
SRM-206	ENST00000490101	NDUFV2	P19404	249 aa		18.34	■□□□□ 0.53
SRM-206	ENST00000490101	LMAN1	P49257	510 aa		18.34	■□□□□ 0.53
SRM-206	ENST00000490101	SARNP	P82979	210 aa	Known RBP	18.34	■□□□□ 0.53
SRM-206	ENST00000490101	ECT2L	Q008S8	904 aa		18.34	■□□□□ 0.53
SRM-206	ENST00000490101	NSUN2	Q08J23	767 aa	Known RBP eCLIP	18.34	■□□□□ 0.53
SRM-206	ENST00000490101	SLC14A2	Q15849	920 aa		18.34	■□□□□ 0.53
SRM-206	ENST00000490101	GEN1	Q17RS7	908 aa		18.34	■□□□□ 0.53
SRM-206	ENST00000490101	PRPF39	Q86UA1	669 aa	Known RBP	18.34	■□□□□ 0.53
SRM-206	ENST00000490101	PDCD7	Q8N8D1	485 aa	Known RBP	18.34	■□□□□ 0.53
SRM-206	ENST00000490101	SLC6A17	Q9H1V8	727 aa		18.34	■□□□□ 0.53
SRM-206	ENST00000490101	FSCN3	Q9NQT6	498 aa		18.34	■□□□□ 0.53
SRM-206	ENST00000490101	LHX3	Q9UBR4	397 aa		18.34	■□□□□ 0.53
SRM-206	ENST00000490101	CYP8B1	Q9UNU6	501 aa		18.34	■□□□□ 0.53
SRM-206	ENST00000490101	TTLL3	Q9Y4R7	772 aa		18.34	■□□□□ 0.53
SRM-206	ENST00000490101	EIF3H	O15372	352 aa	Known RBP eCLIP	18.33	■□□□□ 0.52
SRM-206	ENST00000490101	MMP2	P08253	660 aa		18.33	■□□□□ 0.52
SRM-206	ENST00000490101	MLN	P12872	115 aa		18.33	■□□□□ 0.52
SRM-206	ENST00000490101	ENG	P17813	658 aa		18.33	■□□□□ 0.52
SRM-206	ENST00000490101	CR2	P20023	1033 aa		18.33	■□□□□ 0.52
SRM-206	ENST00000490101	CTSO	P43234	321 aa	Predicted RBP	18.33	■□□□□ 0.52
SRM-206	ENST00000490101	ARL4C	P56559	192 aa		18.33	■□□□□ 0.52
SRM-206	ENST00000490101	MAX	P61244	160 aa		18.33	■□□□□ 0.52
SRM-206	ENST00000490101	SHC2	P98077	582 aa		18.33	■□□□□ 0.52
SRM-206	ENST00000490101	DSC2	Q02487	901 aa		18.33	■□□□□ 0.52
SRM-206	ENST00000490101	ITK	Q08881	620 aa		18.33	■□□□□ 0.52
SRM-206	ENST00000490101	FOXC1	Q12948	553 aa		18.33	■□□□□ 0.52
SRM-206	ENST00000490101	TMEM215	Q68D42	235 aa		18.33	■□□□□ 0.52
SRM-206	ENST00000490101	KDELC1	Q6UW63	502 aa		18.33	■□□□□ 0.52
SRM-206	ENST00000490101	SLC36A4	Q6YBV0	504 aa		18.33	■□□□□ 0.52
SRM-206	ENST00000490101	DEFB124	Q8NES8	71 aa		18.33	■□□□□ 0.52
SRM-206	ENST00000490101	SPATA22	Q8NHS9	363 aa		18.33	■□□□□ 0.52
SRM-206	ENST00000490101	ISG20	Q96AZ6	181 aa	Known RBP	18.33	■□□□□ 0.52
SRM-206	ENST00000490101	SEMA3C	Q99985	751 aa		18.33	■□□□□ 0.52
SRM-206	ENST00000490101	TXLNGY	Q9BZA5	131 aa		18.33	■□□□□ 0.52
SRM-206	ENST00000490101	LRRC40	Q9H9A6	602 aa		18.33	■□□□□ 0.52
SRM-206	ENST00000490101	XAB2	Q9HCS7	855 aa	Known RBP	18.33	■□□□□ 0.52
SRM-206	ENST00000490101	SLC25A13	Q9UJS0	675 aa		18.33	■□□□□ 0.52
SRM-206	ENST00000490101	PILRB	Q9UKJ0	227 aa		18.33	■□□□□ 0.52
SRM-206	ENST00000490101	AKAP13	Q12802	2813 aa		18.33	■□□□□ 0.52
SRM-206	ENST00000490101	ZFHX4	Q86UP3	3567 aa		18.32	■□□□□ 0.52
SRM-206	ENST00000490101	IGF2R	P11717	2491 aa		18.32	■□□□□ 0.52
SRM-206	ENST00000490101	IGHV1OR15-9	A0A0B4J2B8	117 aa		18.32	■□□□□ 0.52
SRM-206	ENST00000490101	WASH3P	C4AMC7	463 aa		18.32	■□□□□ 0.52
SRM-206	ENST00000490101		E7ESA3	106 aa		18.32	■□□□□ 0.52
SRM-206	ENST00000490101	GOLGA8M	H3BSY2	632 aa		18.32	■□□□□ 0.52
SRM-206	ENST00000490101		K7ERQ8	282 aa		18.32	■□□□□ 0.52
SRM-206	ENST00000490101	SMAD6	O43541	496 aa	Known RBP	18.32	■□□□□ 0.52
SRM-206	ENST00000490101	TIMM44	O43615	452 aa		18.32	■□□□□ 0.52
SRM-206	ENST00000490101	SRC	P12931	536 aa		18.32	■□□□□ 0.52
SRM-206	ENST00000490101	MAGEA3	P43357	314 aa		18.32	■□□□□ 0.52
SRM-206	ENST00000490101	CSNK1D	P48730	415 aa		18.32	■□□□□ 0.52
SRM-206	ENST00000490101	RHOA	P61586	193 aa		18.32	■□□□□ 0.52
SRM-206	ENST00000490101	SKOR1	P84550	965 aa		18.32	■□□□□ 0.52
SRM-206	ENST00000490101	MPP3	Q13368	585 aa		18.32	■□□□□ 0.52
SRM-206	ENST00000490101	SLMAP	Q14BN4	828 aa		18.32	■□□□□ 0.52
SRM-206	ENST00000490101	EIF4H	Q15056	248 aa	Known RBP	18.32	■□□□□ 0.52
SRM-206	ENST00000490101	HIF1A	Q16665	826 aa		18.32	■□□□□ 0.52
SRM-206	ENST00000490101	RALGPS1	Q5JS13	557 aa		18.32	■□□□□ 0.52
SRM-206	ENST00000490101	SPDYC	Q5MJ68	293 aa		18.32	■□□□□ 0.52
SRM-206	ENST00000490101	KIAA1324	Q6UXG2	1013 aa	Known RBP	18.32	■□□□□ 0.52
SRM-206	ENST00000490101	TMC3	Q7Z5M5	1100 aa		18.32	■□□□□ 0.52

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