RNA–Protein interactions for RNA: ENST00000489519.1

CACFD1-205, Transcript of calcium channel flower domain containing 1, humanhuman

TSL 2

Gene CACFD1, Length 795 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-205ENST00000489519 ATMINO43313 823 aaPredicted RBP20.25■□□□□ 0.83
CACFD1-205ENST00000489519 BUB1BO60566 1050 aaPredicted RBP20.25■□□□□ 0.83
CACFD1-205ENST00000489519 TCEA3O75764 348 aa20.25■□□□□ 0.83
CACFD1-205ENST00000489519 C6P13671 934 aa20.25■□□□□ 0.83
CACFD1-205ENST00000489519 TSHRP16473 764 aa20.25■□□□□ 0.83
CACFD1-205ENST00000489519 ERCC2P18074 760 aa20.25■□□□□ 0.83
CACFD1-205ENST00000489519 SERPINA4P29622 427 aa20.25■□□□□ 0.83
CACFD1-205ENST00000489519 PRKCIP41743 596 aa20.25■□□□□ 0.83
CACFD1-205ENST00000489519 LIG3P49916 1009 aa20.25■□□□□ 0.83
CACFD1-205ENST00000489519 HK3P52790 923 aa20.25■□□□□ 0.83
CACFD1-205ENST00000489519 NSUN2Q08J23 767 aaKnown RBP eCLIP20.25■□□□□ 0.83
CACFD1-205ENST00000489519 CA9Q16790 459 aa20.25■□□□□ 0.83
CACFD1-205ENST00000489519 PPP6R3Q5H9R7 873 aaPredicted RBP20.25■□□□□ 0.83
CACFD1-205ENST00000489519 AFMIDQ63HM1 303 aa20.25■□□□□ 0.83
CACFD1-205ENST00000489519 LVRNQ6Q4G3 990 aa20.25■□□□□ 0.83
CACFD1-205ENST00000489519 CAMK1DQ8IU85 385 aa20.25■□□□□ 0.83
CACFD1-205ENST00000489519 SLC35F3Q8IY50 421 aa20.25■□□□□ 0.83
CACFD1-205ENST00000489519 TSEN2Q8NCE0 465 aaKnown RBP20.25■□□□□ 0.83
CACFD1-205ENST00000489519 ATL2Q8NHH9 583 aa20.25■□□□□ 0.83
CACFD1-205ENST00000489519 WDR48Q8TAF3 677 aa20.25■□□□□ 0.83
CACFD1-205ENST00000489519 BBC3Q96PG8 261 aaPredicted RBP20.25■□□□□ 0.83
CACFD1-205ENST00000489519 EDEM3Q9BZQ6 932 aa20.25■□□□□ 0.83
CACFD1-205ENST00000489519 CLPBQ9H078 707 aa20.25■□□□□ 0.83
CACFD1-205ENST00000489519 SP110Q9HB58 689 aa20.25■□□□□ 0.83
CACFD1-205ENST00000489519 DOLKQ9UPQ8 538 aa20.25■□□□□ 0.83
CACFD1-205ENST00000489519 ATP8A1Q9Y2Q0 1164 aa20.25■□□□□ 0.83
CACFD1-205ENST00000489519 COQ6Q9Y2Z9 468 aa20.25■□□□□ 0.83
CACFD1-205ENST00000489519 SCINQ9Y6U3 715 aa20.25■□□□□ 0.83
CACFD1-205ENST00000489519 LRRK1Q38SD2 2015 aa20.25■□□□□ 0.83
CACFD1-205ENST00000489519 MUSKO15146 869 aa20.24■□□□□ 0.83
CACFD1-205ENST00000489519 RASGRP1O95267 797 aa20.24■□□□□ 0.83
CACFD1-205ENST00000489519 ALPIP09923 528 aa20.24■□□□□ 0.83
CACFD1-205ENST00000489519 CTSEP14091 401 aa20.24■□□□□ 0.83
CACFD1-205ENST00000489519 MIPP30301 263 aa20.24■□□□□ 0.83
CACFD1-205ENST00000489519 MMP12P39900 470 aa20.24■□□□□ 0.83
CACFD1-205ENST00000489519 PCBP4P57723 403 aaKnown RBP20.24■□□□□ 0.83
CACFD1-205ENST00000489519 POLR2LP62875 67 aaKnown RBP20.24■□□□□ 0.83
CACFD1-205ENST00000489519 KLHL30Q0D2K2 578 aa20.24■□□□□ 0.83
CACFD1-205ENST00000489519 CCDC173Q0VFZ6 552 aa20.24■□□□□ 0.83
CACFD1-205ENST00000489519 INPP5AQ14642 412 aa20.24■□□□□ 0.83
CACFD1-205ENST00000489519 NFATC4Q14934 902 aa20.24■□□□□ 0.83
CACFD1-205ENST00000489519 RBM44Q6ZP01 1051 aaKnown RBP20.24■□□□□ 0.83
CACFD1-205ENST00000489519 ZNF571Q7Z3V5 609 aaPredicted RBP20.24■□□□□ 0.83
CACFD1-205ENST00000489519 HID1Q8IV36 788 aa20.24■□□□□ 0.83
CACFD1-205ENST00000489519 LZTR1Q8N653 840 aa20.24■□□□□ 0.83
CACFD1-205ENST00000489519 TRIM11Q96F44 468 aa20.24■□□□□ 0.83
CACFD1-205ENST00000489519 HIC2Q96JB3 615 aa20.24■□□□□ 0.83
CACFD1-205ENST00000489519 PEBP4Q96S96 227 aa20.24■□□□□ 0.83
CACFD1-205ENST00000489519 KCTD15Q96SI1 283 aaPredicted RBP20.24■□□□□ 0.83
CACFD1-205ENST00000489519 LGMNQ99538 433 aa20.24■□□□□ 0.83
CACFD1-205ENST00000489519 APOOQ9BUR5 198 aa20.24■□□□□ 0.83
CACFD1-205ENST00000489519 CINPQ9BW66 212 aaPredicted RBP20.24■□□□□ 0.83
CACFD1-205ENST00000489519 MRPL47Q9HD33 250 aaKnown RBP20.24■□□□□ 0.83
CACFD1-205ENST00000489519 TMEM63CQ9P1W3 806 aa20.24■□□□□ 0.83
CACFD1-205ENST00000489519 CNOT8Q9UFF9 292 aaKnown RBP20.24■□□□□ 0.83
CACFD1-205ENST00000489519 PADI4Q9UM07 663 aa20.24■□□□□ 0.83
CACFD1-205ENST00000489519 RAI2Q9Y5P3 530 aa20.24■□□□□ 0.83
CACFD1-205ENST00000489519 DFFAO00273 331 aa20.23■□□□□ 0.83
CACFD1-205ENST00000489519 MYBL1P10243 752 aa20.23■□□□□ 0.83
CACFD1-205ENST00000489519 RENBPP51606 427 aa20.23■□□□□ 0.83
CACFD1-205ENST00000489519 TLE3Q04726 772 aa20.23■□□□□ 0.83
CACFD1-205ENST00000489519 BCL2L1Q07817 233 aa20.23■□□□□ 0.83
CACFD1-205ENST00000489519 IL10RBQ08334 325 aa20.23■□□□□ 0.83
CACFD1-205ENST00000489519 IGF2-ASQ6U949 168 aa20.23■□□□□ 0.83
CACFD1-205ENST00000489519 ARHGAP12Q8IWW6 846 aa20.23■□□□□ 0.83
CACFD1-205ENST00000489519 SPACA3Q8IXA5 215 aa20.23■□□□□ 0.83
CACFD1-205ENST00000489519 PAF1Q8N7H5 531 aa20.23■□□□□ 0.83
CACFD1-205ENST00000489519 ECHDC3Q96DC8 303 aa20.23■□□□□ 0.83
CACFD1-205ENST00000489519 FCRL3Q96P31 734 aaPredicted RBP20.23■□□□□ 0.83
CACFD1-205ENST00000489519 THSD1Q9NS62 852 aa20.23■□□□□ 0.83
CACFD1-205ENST00000489519 TK2O00142 265 aa20.22■□□□□ 0.83
CACFD1-205ENST00000489519 DDX3XO00571 662 aaKnown RBP eCLIP20.22■□□□□ 0.835e-8■■■□□ 18.6
CACFD1-205ENST00000489519 LRCH4O75427 683 aa20.22■□□□□ 0.83
CACFD1-205ENST00000489519 PCK1P35558 622 aa20.22■□□□□ 0.83
CACFD1-205ENST00000489519 RGRP47804 291 aa20.22■□□□□ 0.83
CACFD1-205ENST00000489519 ZNF165P49910 485 aa20.22■□□□□ 0.83
CACFD1-205ENST00000489519 SRP54P61011 504 aaKnown RBP20.22■□□□□ 0.83
CACFD1-205ENST00000489519 MTM1Q13496 603 aa20.22■□□□□ 0.83
CACFD1-205ENST00000489519 ALG11Q2TAA5 492 aa20.22■□□□□ 0.83
CACFD1-205ENST00000489519 ENPP7Q6UWV6 458 aa20.22■□□□□ 0.83
CACFD1-205ENST00000489519 CYP4V2Q6ZWL3 525 aaPredicted RBP20.22■□□□□ 0.83
CACFD1-205ENST00000489519 GPR155Q7Z3F1 870 aa20.22■□□□□ 0.83
CACFD1-205ENST00000489519 ZSWIM9Q86XI8 627 aa20.22■□□□□ 0.83
CACFD1-205ENST00000489519 TSACCQ96A04 125 aaPredicted RBP20.22■□□□□ 0.83
CACFD1-205ENST00000489519 ZNF653Q96CK0 615 aa20.22■□□□□ 0.83
CACFD1-205ENST00000489519 ZNF599Q96NL3 588 aa20.22■□□□□ 0.83
CACFD1-205ENST00000489519 PSKH2Q96QS6 385 aa20.22■□□□□ 0.83
CACFD1-205ENST00000489519 TRIM7Q9C029 511 aa20.22■□□□□ 0.83
CACFD1-205ENST00000489519 ZWILCHQ9H900 591 aa20.22■□□□□ 0.83
CACFD1-205ENST00000489519 CWC15Q9P013 229 aaKnown RBP20.22■□□□□ 0.83
CACFD1-205ENST00000489519 SEPT3Q9UH03 358 aa20.22■□□□□ 0.83
CACFD1-205ENST00000489519 A0A1B0GTH6 734 aa20.21■□□□□ 0.83
CACFD1-205ENST00000489519 RBMS1P29558 406 aaKnown RBP20.21■□□□□ 0.83
CACFD1-205ENST00000489519 AP1S1P61966 158 aa20.21■□□□□ 0.83
CACFD1-205ENST00000489519 DPYSQ14117 519 aa20.21■□□□□ 0.83
CACFD1-205ENST00000489519 BOLA3Q53S33 107 aa20.21■□□□□ 0.83
CACFD1-205ENST00000489519 PERM1Q5SV97 790 aa20.21■□□□□ 0.83
CACFD1-205ENST00000489519 TMCO4Q5TGY1 634 aa20.21■□□□□ 0.83
CACFD1-205ENST00000489519 RD3Q7Z3Z2 195 aa20.21■□□□□ 0.83
CACFD1-205ENST00000489519 GKN2Q86XP6 184 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms