RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 KCTD16Q68DU8 428 aa9.45□□□□□ -0.9
SNX17-207ENST00000489402 ERAP2Q6P179 960 aa9.45□□□□□ -0.9
SNX17-207ENST00000489402 SCYL2Q6P3W7 929 aa9.45□□□□□ -0.9
SNX17-207ENST00000489402 BRAT1Q6PJG6 821 aa9.45□□□□□ -0.9
SNX17-207ENST00000489402 ENPP7Q6UWV6 458 aa9.45□□□□□ -0.9
SNX17-207ENST00000489402 DNAAF5Q86Y56 855 aa9.45□□□□□ -0.9
SNX17-207ENST00000489402 JAMLQ86YT9 394 aa9.45□□□□□ -0.9
SNX17-207ENST00000489402 FBXO39Q8N4B4 442 aa9.45□□□□□ -0.9
SNX17-207ENST00000489402 PAF1Q8N7H5 531 aa9.45□□□□□ -0.9
SNX17-207ENST00000489402 C3orf20Q8ND61 904 aa9.45□□□□□ -0.9
SNX17-207ENST00000489402 OR6C4Q8NGE1 309 aa9.45□□□□□ -0.9
SNX17-207ENST00000489402 HCAR2Q8TDS4 363 aa9.45□□□□□ -0.9
SNX17-207ENST00000489402 TSACCQ96A04 125 aaPredicted RBP9.45□□□□□ -0.9
SNX17-207ENST00000489402 CCDC74AQ96AQ1 378 aa9.45□□□□□ -0.9
SNX17-207ENST00000489402 HMCESQ96FZ2 354 aa9.45□□□□□ -0.9
SNX17-207ENST00000489402 EXOC2Q96KP1 924 aa9.45□□□□□ -0.9
SNX17-207ENST00000489402 TMEM74Q96NL1 305 aa9.45□□□□□ -0.9
SNX17-207ENST00000489402 CCNL2Q96S94 520 aaPredicted RBP9.45□□□□□ -0.9
SNX17-207ENST00000489402 NUP62CLQ9H1M0 184 aa9.45□□□□□ -0.9
SNX17-207ENST00000489402 NLRC4Q9NPP4 1024 aa9.45□□□□□ -0.9
SNX17-207ENST00000489402 FAM207AQ9NSI2 230 aaPredicted RBP9.45□□□□□ -0.9
SNX17-207ENST00000489402 SEPT11Q9NVA2 429 aaKnown RBP9.45□□□□□ -0.9
SNX17-207ENST00000489402 DONSONQ9NYP3 566 aa9.45□□□□□ -0.9
SNX17-207ENST00000489402 LHX3Q9UBR4 397 aa9.45□□□□□ -0.9
SNX17-207ENST00000489402 UBA2Q9UBT2 640 aaPredicted RBP9.45□□□□□ -0.9
SNX17-207ENST00000489402 KLQ9UEF7 1012 aa9.45□□□□□ -0.9
SNX17-207ENST00000489402 ATXN7L1Q9ULK2 861 aaPredicted RBP9.45□□□□□ -0.9
SNX17-207ENST00000489402 COQ6Q9Y2Z9 468 aa9.45□□□□□ -0.9
SNX17-207ENST00000489402 TSPAN11A1L157 253 aa9.44□□□□□ -0.9
SNX17-207ENST00000489402 SIGLEC16A6NMB1 481 aa9.44□□□□□ -0.9
SNX17-207ENST00000489402 CYSRT1A8MQ03 144 aa9.44□□□□□ -0.9
SNX17-207ENST00000489402 D6RAR5 112 aa9.44□□□□□ -0.9
SNX17-207ENST00000489402 INSIG1O15503 277 aa9.44□□□□□ -0.9
SNX17-207ENST00000489402 FGF10O15520 208 aaPredicted RBP9.44□□□□□ -0.9
SNX17-207ENST00000489402 PIGNO95427 931 aa9.44□□□□□ -0.9
SNX17-207ENST00000489402 TNFP01375 233 aa9.44□□□□□ -0.9
SNX17-207ENST00000489402 PCCBP05166 539 aa9.44□□□□□ -0.9
SNX17-207ENST00000489402 RPLP0P05388 317 aaKnown RBP9.44□□□□□ -0.9
SNX17-207ENST00000489402 JMJD7P0C870 316 aa9.44□□□□□ -0.9
SNX17-207ENST00000489402 UNGP13051 313 aaPredicted RBP9.44□□□□□ -0.9
SNX17-207ENST00000489402 SLC5A2P31639 672 aa9.44□□□□□ -0.9
SNX17-207ENST00000489402 UGT1A5P35504 534 aa9.44□□□□□ -0.9
SNX17-207ENST00000489402 AIF1P55008 147 aa9.44□□□□□ -0.9
SNX17-207ENST00000489402 INHBCP55103 352 aa9.44□□□□□ -0.9
SNX17-207ENST00000489402 JAM2P57087 298 aa9.44□□□□□ -0.9
SNX17-207ENST00000489402 SRP54P61011 504 aaKnown RBP9.44□□□□□ -0.9
SNX17-207ENST00000489402 MTM1Q13496 603 aa9.44□□□□□ -0.9
SNX17-207ENST00000489402 INPP5AQ14642 412 aa9.44□□□□□ -0.9
SNX17-207ENST00000489402 UGP2Q16851 508 aa9.44□□□□□ -0.9
SNX17-207ENST00000489402 WSCD2Q2TBF2 565 aa9.44□□□□□ -0.9
SNX17-207ENST00000489402 KIAA1614Q5VZ46 1190 aa9.44□□□□□ -0.9
SNX17-207ENST00000489402 DNAJC24Q6P3W2 148 aa9.44□□□□□ -0.9
SNX17-207ENST00000489402 WDR59Q6PJI9 974 aa9.44□□□□□ -0.9
SNX17-207ENST00000489402 RAB11FIP2Q7L804 512 aa9.44□□□□□ -0.9
SNX17-207ENST00000489402 PHF13Q86YI8 300 aaPredicted RBP9.44□□□□□ -0.9
SNX17-207ENST00000489402 PYROXD2Q8N2H3 581 aa9.44□□□□□ -0.9
SNX17-207ENST00000489402 PCMTD1Q96MG8 357 aaPredicted RBP9.44□□□□□ -0.9
SNX17-207ENST00000489402 WDR92Q96MX6 357 aa9.44□□□□□ -0.9
SNX17-207ENST00000489402 ZNF641Q96N77 438 aaPredicted RBP9.44□□□□□ -0.9
SNX17-207ENST00000489402 TUBGCP5Q96RT8 1024 aa9.44□□□□□ -0.9
SNX17-207ENST00000489402 PCDHB18PQ96TA0 734 aa9.44□□□□□ -0.9
SNX17-207ENST00000489402 APOOQ9BUR5 198 aa9.44□□□□□ -0.9
SNX17-207ENST00000489402 SEMA4CQ9C0C4 833 aa9.44□□□□□ -0.9
SNX17-207ENST00000489402 VPS16Q9H269 839 aa9.44□□□□□ -0.9
SNX17-207ENST00000489402 SUV39H2Q9H5I1 410 aa9.44□□□□□ -0.9
SNX17-207ENST00000489402 NOL6Q9H6R4 1146 aaKnown RBP9.44□□□□□ -0.9
SNX17-207ENST00000489402 PCDH12Q9NPG4 1184 aa9.44□□□□□ -0.9
SNX17-207ENST00000489402 OR1A2Q9Y585 309 aa9.44□□□□□ -0.9
SNX17-207ENST00000489402 PCDHGA7Q9Y5G6 932 aa9.44□□□□□ -0.9
SNX17-207ENST00000489402 ANKRD36A6QL64 1941 aa9.44□□□□□ -0.9
SNX17-207ENST00000489402 ZNF462Q96JM2 2506 aa9.43□□□□□ -0.9
SNX17-207ENST00000489402 WASH4PA8MWX3 477 aa9.43□□□□□ -0.9
SNX17-207ENST00000489402 CACNB4O00305 520 aaPredicted RBP9.43□□□□□ -0.9
SNX17-207ENST00000489402 CCP110O43303 1012 aa9.43□□□□□ -0.9
SNX17-207ENST00000489402 SLC28A2O43868 658 aa9.43□□□□□ -0.9
SNX17-207ENST00000489402 KELP23276 732 aa9.43□□□□□ -0.9
SNX17-207ENST00000489402 SERPINA4P29622 427 aa9.43□□□□□ -0.9
SNX17-207ENST00000489402 CCKBRP32239 447 aa9.43□□□□□ -0.9
SNX17-207ENST00000489402 HTR7P34969 479 aa9.43□□□□□ -0.9
SNX17-207ENST00000489402 MMP12P39900 470 aa9.43□□□□□ -0.9
SNX17-207ENST00000489402 LIG3P49916 1009 aa9.43□□□□□ -0.9
SNX17-207ENST00000489402 ZNF143P52747 638 aaPredicted RBP9.43□□□□□ -0.9
SNX17-207ENST00000489402 TPI1P60174 286 aa9.43□□□□□ -0.9
SNX17-207ENST00000489402 CCL7P80098 99 aa9.43□□□□□ -0.9
SNX17-207ENST00000489402 PTP4A2Q12974 167 aa9.43□□□□□ -0.9
SNX17-207ENST00000489402 AGERQ15109 404 aa9.43□□□□□ -0.9
SNX17-207ENST00000489402 KRT31Q15323 416 aa9.43□□□□□ -0.9
SNX17-207ENST00000489402 CYTH1Q15438 398 aa9.43□□□□□ -0.9
SNX17-207ENST00000489402 CLEC16AQ2KHT3 1053 aa9.43□□□□□ -0.9
SNX17-207ENST00000489402 B3GNT8Q7Z7M8 397 aa9.43□□□□□ -0.9
SNX17-207ENST00000489402 CCNJLQ8IV13 435 aa9.43□□□□□ -0.9
SNX17-207ENST00000489402 SFTPA2Q8IWL1 248 aa9.43□□□□□ -0.9
SNX17-207ENST00000489402 UMODL1-AS1Q8N2C9 162 aa9.43□□□□□ -0.9
SNX17-207ENST00000489402 ANKRD20A12PQ8NF67 263 aa9.43□□□□□ -0.9
SNX17-207ENST00000489402 NEK11Q8NG66 645 aa9.43□□□□□ -0.9
SNX17-207ENST00000489402 MCEEQ96PE7 176 aa9.43□□□□□ -0.9
SNX17-207ENST00000489402 FOXP3Q9BZS1 431 aa9.43□□□□□ -0.9
SNX17-207ENST00000489402 LRRN3Q9H3W5 708 aa9.43□□□□□ -0.9
SNX17-207ENST00000489402 ATP13A3Q9H7F0 1226 aa9.43□□□□□ -0.9
SNX17-207ENST00000489402 SEPT10Q9P0V9 454 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms