RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 TSTD2Q5T7W7 516 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 LGSNQ5TDP6 509 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 KIAA0930Q6ICG6 404 aaPredicted RBP10.08□□□□□ -0.8
USP11-211ENST00000489111 DPY19L3Q6ZPD9 716 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 MARK2Q7KZI7 788 aaKnown RBP10.08□□□□□ -0.8
USP11-211ENST00000489111 PLPP6Q8IY26 295 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 UNC5BQ8IZJ1 945 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 CNPY4Q8N129 248 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 NDUFAF2Q8N183 169 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 OTUD6BQ8N6M0 293 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 KDM1BQ8NB78 822 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 GRIN3AQ8TCU5 1115 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 BRSK1Q8TDC3 778 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 DCAKDQ8WVC6 231 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 PPM1EQ8WY54 764 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 HLA-CQ95604 372 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 TLCD1Q96CP7 247 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 MRGPRX3Q96LB0 322 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 FCRL3Q96P31 734 aaPredicted RBP10.08□□□□□ -0.8
USP11-211ENST00000489111 CDX2Q99626 313 aaPredicted RBP10.08□□□□□ -0.8
USP11-211ENST00000489111 FAM167BQ9BTA0 163 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 DHRS4Q9BTZ2 278 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 RPP25Q9BUL9 199 aaKnown RBP10.08□□□□□ -0.8
USP11-211ENST00000489111 NSMCE4AQ9NXX6 385 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 HACD3Q9P035 362 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 ZNF180Q9UJW8 692 aa10.08□□□□□ -0.8
USP11-211ENST00000489111 NUP210Q8TEM1 1887 aaPredicted RBP10.08□□□□□ -0.8
USP11-211ENST00000489111 PDE4DIPQ5VU43 2346 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 DOCK4Q8N1I0 1966 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 EDDM13A0A1B0GTR0 161 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 A0A1W2PQ67 120 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 MROH6A6NGR9 719 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 CXorf49A8MYA2 514 aaPredicted RBP10.07□□□□□ -0.8
USP11-211ENST00000489111 PRRT4C9JH25 899 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 ARNTLO00327 626 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 HTRA2O43464 458 aaPredicted RBP10.07□□□□□ -0.8
USP11-211ENST00000489111 KAT7O95251 611 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 VAPBO95292 243 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 PRLP01236 227 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 PRKCGP05129 697 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 UGT2B4P06133 528 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 PDHA1P08559 390 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 NR1D1P20393 614 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 GCAP28676 217 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 GKP32189 559 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 ABL2P42684 1182 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 PRAMEP78395 509 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 TAF1AQ15573 450 aaPredicted RBP10.07□□□□□ -0.8
USP11-211ENST00000489111 CNGA3Q16281 694 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 PTPRNQ16849 979 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 AAK1Q2M2I8 961 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 HSP90AA5PQ58FG0 334 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 ESRP1Q6NXG1 681 aaKnown RBP10.07□□□□□ -0.8
USP11-211ENST00000489111 ADGRD1Q6QNK2 874 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 SERPINA13PQ6UXR4 307 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 GDPD4Q6W3E5 623 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 USP45Q70EL2 814 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 Q7L0L9 218 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 SUGP1Q8IWZ8 645 aaKnown RBP10.07□□□□□ -0.8
USP11-211ENST00000489111 PLCD3Q8N3E9 789 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 PHTF2Q8N3S3 785 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 ARFGAP2Q8N6H7 521 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 OR2A12Q8NGT7 310 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 FRS2Q8WU20 508 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 PEX13Q92968 403 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 NSMCE3Q96MG7 304 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 ZNF778Q96MU6 729 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 ZNF641Q96N77 438 aaPredicted RBP10.07□□□□□ -0.8
USP11-211ENST00000489111 SRPK1Q96SB4 655 aaKnown RBP10.07□□□□□ -0.8
USP11-211ENST00000489111 CPNE1Q99829 537 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 HEPHQ9BQS7 1158 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 PHF7Q9BWX1 381 aaPredicted RBP10.07□□□□□ -0.8
USP11-211ENST00000489111 OSBPL1AQ9BXW6 950 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 CPEB1Q9BZB8 566 aaKnown RBP10.07□□□□□ -0.8
USP11-211ENST00000489111 TRABDQ9H4I3 376 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 SMYD2Q9NRG4 433 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 TREX1Q9NSU2 369 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 IL1RAPL1Q9NZN1 696 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 SENP1Q9P0U3 644 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 SLC2A6Q9UGQ3 507 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 SPO11Q9Y5K1 396 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 ARL5AQ9Y689 179 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 DENND4CQ5VZ89 1909 aa10.07□□□□□ -0.8
USP11-211ENST00000489111 CAPN8A6NHC0 703 aa10.06□□□□□ -0.8
USP11-211ENST00000489111 ANKRD66B4E2M5 251 aa10.06□□□□□ -0.8
USP11-211ENST00000489111 WASH3PC4AMC7 463 aa10.06□□□□□ -0.8
USP11-211ENST00000489111 TRAFD1O14545 582 aaPredicted RBP10.06□□□□□ -0.8
USP11-211ENST00000489111 LDB2O43679 373 aa10.06□□□□□ -0.8
USP11-211ENST00000489111 FZD6O60353 706 aa10.06□□□□□ -0.8
USP11-211ENST00000489111 RPP40O75818 363 aaKnown RBP10.06□□□□□ -0.8
USP11-211ENST00000489111 C1QAP02745 245 aa10.06□□□□□ -0.8
USP11-211ENST00000489111 MT-ND3P03897 115 aa10.06□□□□□ -0.8
USP11-211ENST00000489111 CTPS1P17812 591 aa10.06□□□□□ -0.8
USP11-211ENST00000489111 XPAP23025 273 aaPredicted RBP10.06□□□□□ -0.8
USP11-211ENST00000489111 NFKBIAP25963 317 aa10.06□□□□□ -0.8
USP11-211ENST00000489111 CNTFP26441 200 aa10.06□□□□□ -0.8
USP11-211ENST00000489111 GP5P40197 560 aa10.06□□□□□ -0.8
USP11-211ENST00000489111 SOX9P48436 509 aa10.06□□□□□ -0.8
USP11-211ENST00000489111 ZNF140P52738 457 aaPredicted RBP10.06□□□□□ -0.8
USP11-211ENST00000489111 MESP2Q0VG99 397 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms