RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 RCBTB1Q8NDN9 531 aa16.32■□□□□ 0.2
USP48-210ENST00000489108 ATL2Q8NHH9 583 aa16.32■□□□□ 0.2
USP48-210ENST00000489108 OR1E3Q8WZA6 343 aa16.32■□□□□ 0.2
USP48-210ENST00000489108 SCAND2PQ9GZW5 306 aaPredicted RBP16.32■□□□□ 0.2
USP48-210ENST00000489108 CDH19Q9H159 772 aa16.32■□□□□ 0.2
USP48-210ENST00000489108 DPEP2Q9H4A9 486 aa16.32■□□□□ 0.2
USP48-210ENST00000489108 GDPD2Q9HCC8 539 aa16.32■□□□□ 0.2
USP48-210ENST00000489108 PPARGC1AQ9UBK2 798 aaKnown RBP16.32■□□□□ 0.2
USP48-210ENST00000489108 DNAI1Q9UI46 699 aa16.32■□□□□ 0.2
USP48-210ENST00000489108 HPCAL4Q9UM19 191 aa16.32■□□□□ 0.2
USP48-210ENST00000489108 DGKBQ9Y6T7 804 aa16.32■□□□□ 0.2
USP48-210ENST00000489108 ANKRD36A6QL64 1941 aa16.31■□□□□ 0.2
USP48-210ENST00000489108 NUDT21O43809 227 aaKnown RBP16.31■□□□□ 0.2
USP48-210ENST00000489108 CPNE6O95741 557 aa16.31■□□□□ 0.2
USP48-210ENST00000489108 SLC9A1P19634 815 aa16.31■□□□□ 0.2
USP48-210ENST00000489108 KRT9P35527 623 aa16.31■□□□□ 0.2
USP48-210ENST00000489108 ETFBP38117 255 aa16.31■□□□□ 0.2
USP48-210ENST00000489108 PTK2Q05397 1052 aa16.31■□□□□ 0.2
USP48-210ENST00000489108 RAD51Q06609 339 aa16.31■□□□□ 0.2
USP48-210ENST00000489108 SPECC1LQ69YQ0 1117 aa16.31■□□□□ 0.2
USP48-210ENST00000489108 FOXR2Q6PJQ5 311 aa16.31■□□□□ 0.2
USP48-210ENST00000489108 FAM131BQ86XD5 332 aa16.31■□□□□ 0.2
USP48-210ENST00000489108 HSCBQ8IWL3 235 aa16.31■□□□□ 0.2
USP48-210ENST00000489108 CCL4L1Q8NHW4 92 aa16.31■□□□□ 0.2
USP48-210ENST00000489108 C9orf43Q8TAL5 461 aaPredicted RBP16.31■□□□□ 0.2
USP48-210ENST00000489108 GPBAR1Q8TDU6 330 aa16.31■□□□□ 0.2
USP48-210ENST00000489108 CATSPER2Q96P56 530 aa16.31■□□□□ 0.2
USP48-210ENST00000489108 TTYH3Q9C0H2 523 aa16.31■□□□□ 0.2
USP48-210ENST00000489108 TMEM168Q9H0V1 697 aa16.31■□□□□ 0.2
USP48-210ENST00000489108 MRPL40Q9NQ50 206 aaKnown RBP16.31■□□□□ 0.2
USP48-210ENST00000489108 DKK3Q9UBP4 350 aa16.31■□□□□ 0.2
USP48-210ENST00000489108 DAAM1Q9Y4D1 1078 aa16.31■□□□□ 0.2
USP48-210ENST00000489108 FAM170AA1A519 330 aa16.3■□□□□ 0.2
USP48-210ENST00000489108 TMEM202A6NGA9 273 aa16.3■□□□□ 0.2
USP48-210ENST00000489108 NKX2-8O15522 239 aa16.3■□□□□ 0.2
USP48-210ENST00000489108 PCCBP05166 539 aa16.3■□□□□ 0.2
USP48-210ENST00000489108 XPAP23025 273 aaPredicted RBP16.3■□□□□ 0.2
USP48-210ENST00000489108 ALDH4A1P30038 563 aa16.3■□□□□ 0.2
USP48-210ENST00000489108 FLT3P36888 993 aa16.3■□□□□ 0.2
USP48-210ENST00000489108 TRNP1Q6NT89 227 aa16.3■□□□□ 0.2
USP48-210ENST00000489108 TRIM65Q6PJ69 517 aa16.3■□□□□ 0.2
USP48-210ENST00000489108 CACNA2D3Q8IZS8 1091 aa16.3■□□□□ 0.2
USP48-210ENST00000489108 PLA2G15Q8NCC3 412 aa16.3■□□□□ 0.2
USP48-210ENST00000489108 NELFBQ8WX92 580 aa16.3■□□□□ 0.2
USP48-210ENST00000489108 SHC3Q92529 594 aa16.3■□□□□ 0.2
USP48-210ENST00000489108 GDAP1L1Q96MZ0 367 aa16.3■□□□□ 0.2
USP48-210ENST00000489108 NUDT22Q9BRQ3 303 aa16.3■□□□□ 0.2
USP48-210ENST00000489108 MAGEH1Q9H213 219 aa16.3■□□□□ 0.2
USP48-210ENST00000489108 TMEM51Q9NW97 253 aa16.3■□□□□ 0.2
USP48-210ENST00000489108 PCDHGA3Q9Y5H0 932 aa16.3■□□□□ 0.2
USP48-210ENST00000489108 B3GALT1Q9Y5Z6 326 aa16.3■□□□□ 0.2
USP48-210ENST00000489108 SPTBN1Q01082 2364 aaKnown RBP16.3■□□□□ 0.2
USP48-210ENST00000489108 UNC79Q9P2D8 2635 aa16.3■□□□□ 0.2
USP48-210ENST00000489108 IGHV5-10-1A0A0J9YXX1 117 aa16.29■□□□□ 0.2
USP48-210ENST00000489108 ZNF891A8MT65 544 aaPredicted RBP16.29■□□□□ 0.2
USP48-210ENST00000489108 HGSO14964 777 aaPredicted RBP16.29■□□□□ 0.2
USP48-210ENST00000489108 INSIG1O15503 277 aa16.29■□□□□ 0.2
USP48-210ENST00000489108 KDELR3O43731 214 aa16.29■□□□□ 0.2
USP48-210ENST00000489108 TMCC1O94876 653 aa16.29■□□□□ 0.2
USP48-210ENST00000489108 GNA14O95837 355 aa16.29■□□□□ 0.2
USP48-210ENST00000489108 CLCN1P35523 988 aa16.29■□□□□ 0.2
USP48-210ENST00000489108 MARSP56192 900 aaKnown RBP16.29■□□□□ 0.2
USP48-210ENST00000489108 MAZP56270 477 aaKnown RBP16.29■□□□□ 0.2
USP48-210ENST00000489108 ELP6Q0PNE2 266 aa16.29■□□□□ 0.2
USP48-210ENST00000489108 MTM1Q13496 603 aa16.29■□□□□ 0.2
USP48-210ENST00000489108 FAM102AQ5T9C2 384 aaPredicted RBP16.29■□□□□ 0.2
USP48-210ENST00000489108 RWDD4Q6NW29 188 aaKnown RBP16.29■□□□□ 0.2
USP48-210ENST00000489108 BNIPLQ7Z465 357 aa16.29■□□□□ 0.2
USP48-210ENST00000489108 SLC47A2Q86VL8 602 aa16.29■□□□□ 0.2
USP48-210ENST00000489108 NLRP14Q86W24 1093 aa16.29■□□□□ 0.2
USP48-210ENST00000489108 OR56A4Q8NGH8 313 aa16.29■□□□□ 0.2
USP48-210ENST00000489108 FUBP1Q96AE4 644 aaKnown RBP16.29■□□□□ 0.2
USP48-210ENST00000489108 MIB2Q96AX9 1013 aa16.29■□□□□ 0.2
USP48-210ENST00000489108 HMCESQ96FZ2 354 aa16.29■□□□□ 0.2
USP48-210ENST00000489108 ABHD17AQ96GS6 310 aa16.29■□□□□ 0.2
USP48-210ENST00000489108 FAM81BQ96LP2 452 aa16.29■□□□□ 0.2
USP48-210ENST00000489108 CCDC74BQ96LY2 380 aa16.29■□□□□ 0.2
USP48-210ENST00000489108 CFAP57Q96MR6 1250 aa16.29■□□□□ 0.2
USP48-210ENST00000489108 MAGEB5Q9BZ81 275 aa16.29■□□□□ 0.2
USP48-210ENST00000489108 FGF22Q9HCT0 170 aa16.29■□□□□ 0.2
USP48-210ENST00000489108 OR12D3Q9UGF7 316 aa16.29■□□□□ 0.2
USP48-210ENST00000489108 DACH1Q9UI36 760 aa16.29■□□□□ 0.2
USP48-210ENST00000489108 MFHAS1Q9Y4C4 1052 aa16.29■□□□□ 0.2
USP48-210ENST00000489108 PPP1R3GB7ZBB8 358 aa16.28■□□□□ 0.2
USP48-210ENST00000489108 MTSS1O43312 755 aa16.28■□□□□ 0.2
USP48-210ENST00000489108 BUB1O43683 1085 aa16.28■□□□□ 0.2
USP48-210ENST00000489108 DUX1O43812 170 aa16.28■□□□□ 0.2
USP48-210ENST00000489108 IGSF6O95976 241 aa16.28■□□□□ 0.2
USP48-210ENST00000489108 PRKAR1AP10644 381 aa16.28■□□□□ 0.2
USP48-210ENST00000489108 RHOQP17081 205 aa16.28■□□□□ 0.2
USP48-210ENST00000489108 CD1CP29017 333 aa16.28■□□□□ 0.2
USP48-210ENST00000489108 GABRB2P47870 512 aa16.28■□□□□ 0.2
USP48-210ENST00000489108 MAPKAPK2P49137 400 aa16.28■□□□□ 0.2
USP48-210ENST00000489108 LIG3P49916 1009 aa16.28■□□□□ 0.2
USP48-210ENST00000489108 STX17P56962 302 aa16.28■□□□□ 0.2
USP48-210ENST00000489108 AGERQ15109 404 aa16.28■□□□□ 0.2
USP48-210ENST00000489108 RAB6CQ53S08 254 aa16.28■□□□□ 0.2
USP48-210ENST00000489108 C2CD6Q53TS8 623 aa16.28■□□□□ 0.2
USP48-210ENST00000489108 XYLT1Q86Y38 959 aa16.28■□□□□ 0.2
USP48-210ENST00000489108 ART4Q93070 314 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms