RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 NAP1L1P55209 391 aaKnown RBP9.19□□□□□ -0.94
HDAC6-232ENST00000489053 YPEL5P62699 121 aa9.19□□□□□ -0.94
HDAC6-232ENST00000489053 PPARDQ03181 441 aa9.19□□□□□ -0.94
HDAC6-232ENST00000489053 SLC10A7Q0GE19 358 aa9.19□□□□□ -0.94
HDAC6-232ENST00000489053 MMRN1Q13201 1228 aa9.19□□□□□ -0.94
HDAC6-232ENST00000489053 DNAJC3Q13217 504 aa9.19□□□□□ -0.94
HDAC6-232ENST00000489053 ZNF211Q13398 564 aaPredicted RBP9.19□□□□□ -0.94
HDAC6-232ENST00000489053 ILKQ13418 452 aa9.19□□□□□ -0.94
HDAC6-232ENST00000489053 DPYSL3Q14195 570 aa9.19□□□□□ -0.94
HDAC6-232ENST00000489053 TMEM52BQ4KMG9 183 aa9.19□□□□□ -0.94
HDAC6-232ENST00000489053 ANKRD20A8PQ5CZ79 823 aa9.19□□□□□ -0.94
HDAC6-232ENST00000489053 RALGPS1Q5JS13 557 aa9.19□□□□□ -0.94
HDAC6-232ENST00000489053 ARMC12Q5T9G4 340 aa9.19□□□□□ -0.94
HDAC6-232ENST00000489053 CYP4V2Q6ZWL3 525 aaPredicted RBP9.19□□□□□ -0.94
HDAC6-232ENST00000489053 USP45Q70EL2 814 aa9.19□□□□□ -0.94
HDAC6-232ENST00000489053 RD3Q7Z3Z2 195 aa9.19□□□□□ -0.94
HDAC6-232ENST00000489053 SLC22A18ASQ8N1D0 253 aa9.19□□□□□ -0.94
HDAC6-232ENST00000489053 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.19□□□□□ -0.94
HDAC6-232ENST00000489053 SLC35G2Q8TBE7 412 aa9.19□□□□□ -0.94
HDAC6-232ENST00000489053 RFFLQ8WZ73 363 aa9.19□□□□□ -0.94
HDAC6-232ENST00000489053 CCDC86Q9H6F5 360 aaKnown RBP9.19□□□□□ -0.94
HDAC6-232ENST00000489053 NT5MQ9NPB1 228 aa9.19□□□□□ -0.94
HDAC6-232ENST00000489053 ETNK2Q9NVF9 386 aa9.19□□□□□ -0.94
HDAC6-232ENST00000489053 GOLGA6AQ9NYA3 693 aa9.19□□□□□ -0.94
HDAC6-232ENST00000489053 NLGN3Q9NZ94 848 aa9.19□□□□□ -0.94
HDAC6-232ENST00000489053 KLQ9UEF7 1012 aa9.19□□□□□ -0.94
HDAC6-232ENST00000489053 APOBEC3BQ9UH17 382 aaKnown RBP9.19□□□□□ -0.94
HDAC6-232ENST00000489053 MOSPD1Q9UJG1 213 aa9.19□□□□□ -0.94
HDAC6-232ENST00000489053 PCDHGA1Q9Y5H4 931 aa9.19□□□□□ -0.94
HDAC6-232ENST00000489053 CABIN1Q9Y6J0 2220 aa9.19□□□□□ -0.94
HDAC6-232ENST00000489053 DSPP15924 2871 aaKnown RBP9.18□□□□□ -0.94
HDAC6-232ENST00000489053 TSPAN11A1L157 253 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 A8MX80 341 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 PDE2AO00408 941 aaPredicted RBP9.18□□□□□ -0.94
HDAC6-232ENST00000489053 RIOK3O14730 519 aaKnown RBP9.18□□□□□ -0.94
HDAC6-232ENST00000489053 AQP9O43315 295 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 SIGLEC6O43699 453 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 MFSD11O43934 449 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 BUB1BO60566 1050 aaPredicted RBP9.18□□□□□ -0.94
HDAC6-232ENST00000489053 CSF2P04141 144 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 PRKCGP05129 697 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 PTMAP06454 111 aaKnown RBP9.18□□□□□ -0.94
HDAC6-232ENST00000489053 ANXA6P08133 673 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 ITIH2P19823 946 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 MMP12P39900 470 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 GARSP41250 739 aaKnown RBP9.18□□□□□ -0.94
HDAC6-232ENST00000489053 SLC1A1P43005 524 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 MAGEA1P43355 309 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 RGRP47804 291 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 MAXP61244 160 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 E2F1Q01094 437 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 SEMG2Q02383 582 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 FGL2Q14314 439 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 FZD2Q14332 565 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 IRF4Q15306 451 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 ELOCQ15369 112 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 SHBQ15464 509 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 IFI16Q16666 785 aaKnown RBP9.18□□□□□ -0.94
HDAC6-232ENST00000489053 PRRT3Q5FWE3 981 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 CCDC181Q5TID7 509 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 TXNRD3NBQ6F5E7 133 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 ESRP1Q6NXG1 681 aaKnown RBP9.18□□□□□ -0.94
HDAC6-232ENST00000489053 SARM1Q6SZW1 724 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 MACC1Q6ZN28 852 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 DPPA4Q7L190 304 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 TMPRSS7Q7RTY8 843 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 TMPRSS12Q86WS5 348 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 RFX6Q8HWS3 928 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 HID1Q8IV36 788 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 RHOT1Q8IXI2 618 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 PHACTR4Q8IZ21 702 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 ZNF548Q8NEK5 533 aaPredicted RBP9.18□□□□□ -0.94
HDAC6-232ENST00000489053 OR4C6Q8NH72 309 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 BMFQ96LC9 184 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 NUDCD1Q96RS6 583 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 CHP1Q99653 195 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 WDR26Q9H7D7 661 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 SYNDIG1Q9H7V2 258 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 USP29Q9HBJ7 922 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 RBM22Q9NW64 420 aaKnown RBP eCLIP9.18□□□□□ -0.94
HDAC6-232ENST00000489053 KCTD5Q9NXV2 234 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 DDX56Q9NY93 547 aaKnown RBP9.18□□□□□ -0.94
HDAC6-232ENST00000489053 SEPT10Q9P0V9 454 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 INTUQ9ULD6 942 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 COQ6Q9Y2Z9 468 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.18□□□□□ -0.94
HDAC6-232ENST00000489053 PCDHGC4Q9Y5F7 938 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 HEY1Q9Y5J3 304 aa9.18□□□□□ -0.94
HDAC6-232ENST00000489053 TTC24A2A3L6 582 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-232ENST00000489053 CFAP69A5D8W1 941 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 FAM149AA5PLN7 773 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 C10orf142B7Z368 130 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 APOL1O14791 398 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 PPP1R12AO14974 1030 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-232ENST00000489053 SCAMP1O15126 338 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 MATN3O15232 486 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 MAFKO60675 156 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 RECQL5O94762 991 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-232ENST00000489053 RASGRP1O95267 797 aa9.17□□□□□ -0.94
HDAC6-232ENST00000489053 CD48P09326 243 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms