RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 APOBEC2Q9Y235 224 aaKnown RBP14.39□□□□□ -0.11
BRCA1-218ENST00000489037 TTLL3Q9Y4R7 772 aa14.39□□□□□ -0.11
BRCA1-218ENST00000489037 DNAH14Q0VDD8 3507 aa14.39□□□□□ -0.11
BRCA1-218ENST00000489037 NCOR2Q9Y618 2525 aa14.38□□□□□ -0.11
BRCA1-218ENST00000489037 CFAP69A5D8W1 941 aa14.38□□□□□ -0.11
BRCA1-218ENST00000489037 TOR1BO14657 336 aa14.38□□□□□ -0.11
BRCA1-218ENST00000489037 SPINT1O43278 529 aa14.38□□□□□ -0.11
BRCA1-218ENST00000489037 ZRANB2O95218 330 aaKnown RBP eCLIP14.38□□□□□ -0.11
BRCA1-218ENST00000489037 TRIM16O95361 564 aa14.38□□□□□ -0.11
BRCA1-218ENST00000489037 CPP00450 1065 aa14.38□□□□□ -0.11
BRCA1-218ENST00000489037 CCNB1P14635 433 aa14.38□□□□□ -0.11
BRCA1-218ENST00000489037 ITIH2P19823 946 aa14.38□□□□□ -0.11
BRCA1-218ENST00000489037 CR2P20023 1033 aa14.38□□□□□ -0.11
BRCA1-218ENST00000489037 THOP1P52888 689 aa14.38□□□□□ -0.11
BRCA1-218ENST00000489037 GSDMDP57764 484 aa14.38□□□□□ -0.11
BRCA1-218ENST00000489037 PTK2BQ14289 1009 aa14.38□□□□□ -0.11
BRCA1-218ENST00000489037 PDK1Q15118 436 aa14.38□□□□□ -0.11
BRCA1-218ENST00000489037 ARMC12Q5T9G4 340 aa14.38□□□□□ -0.11
BRCA1-218ENST00000489037 SLC9A4Q6AI14 798 aa14.38□□□□□ -0.11
BRCA1-218ENST00000489037 RAD9BQ6WBX8 426 aa14.38□□□□□ -0.11
BRCA1-218ENST00000489037 CCDC50Q8IVM0 306 aa14.38□□□□□ -0.11
BRCA1-218ENST00000489037 RCOR2Q8IZ40 523 aa14.38□□□□□ -0.11
BRCA1-218ENST00000489037 PGBD5Q8N414 524 aa14.38□□□□□ -0.11
BRCA1-218ENST00000489037 MAML1Q92585 1016 aa14.38□□□□□ -0.11
BRCA1-218ENST00000489037 IFT43Q96FT9 208 aa14.38□□□□□ -0.11
BRCA1-218ENST00000489037 RBM41Q96IZ5 413 aaKnown RBP14.38□□□□□ -0.11
BRCA1-218ENST00000489037 BMFQ96LC9 184 aa14.38□□□□□ -0.11
BRCA1-218ENST00000489037 SEMA3CQ99985 751 aa14.38□□□□□ -0.11
BRCA1-218ENST00000489037 BRD8Q9H0E9 1235 aa14.38□□□□□ -0.11
BRCA1-218ENST00000489037 DTLQ9NZJ0 730 aa14.38□□□□□ -0.11
BRCA1-218ENST00000489037 PHTF1Q9UMS5 762 aa14.38□□□□□ -0.11
BRCA1-218ENST00000489037 TFR2Q9UP52 801 aa14.38□□□□□ -0.11
BRCA1-218ENST00000489037 PCDHGC4Q9Y5F7 938 aa14.38□□□□□ -0.11
BRCA1-218ENST00000489037 GOLGA4Q13439 2230 aaKnown RBP14.38□□□□□ -0.11
BRCA1-218ENST00000489037 ARID1BQ8NFD5 2236 aaPredicted RBP14.37□□□□□ -0.11
BRCA1-218ENST00000489037 TTC24A2A3L6 582 aaPredicted RBP14.37□□□□□ -0.11
BRCA1-218ENST00000489037 POM121BA6NF01 834 aa14.37□□□□□ -0.11
BRCA1-218ENST00000489037 C3orf70A6NLC5 250 aaPredicted RBP14.37□□□□□ -0.11
BRCA1-218ENST00000489037 BTNL10A8MVZ5 291 aa14.37□□□□□ -0.11
BRCA1-218ENST00000489037 H3BM21 787 aa14.37□□□□□ -0.11
BRCA1-218ENST00000489037 TRAFD1O14545 582 aaPredicted RBP14.37□□□□□ -0.11
BRCA1-218ENST00000489037 RAD51BO15315 384 aa14.37□□□□□ -0.11
BRCA1-218ENST00000489037 ELFN1P0C7U0 828 aa14.37□□□□□ -0.11
BRCA1-218ENST00000489037 CYP2A6P11509 494 aaPredicted RBP14.37□□□□□ -0.11
BRCA1-218ENST00000489037 C6P13671 934 aa14.37□□□□□ -0.11
BRCA1-218ENST00000489037 EPHA8P29322 1005 aaPredicted RBP14.37□□□□□ -0.11
BRCA1-218ENST00000489037 MMP12P39900 470 aa14.37□□□□□ -0.11
BRCA1-218ENST00000489037 CETN2P41208 172 aa14.37□□□□□ -0.11
BRCA1-218ENST00000489037 LIG3P49916 1009 aa14.37□□□□□ -0.11
BRCA1-218ENST00000489037 VAV2P52735 878 aa14.37□□□□□ -0.11
BRCA1-218ENST00000489037 YPEL5P62699 121 aa14.37□□□□□ -0.11
BRCA1-218ENST00000489037 DYNLT1P63172 113 aa14.37□□□□□ -0.11
BRCA1-218ENST00000489037 AP1B1Q10567 949 aa14.37□□□□□ -0.11
BRCA1-218ENST00000489037 KIF5AQ12840 1032 aa14.37□□□□□ -0.11
BRCA1-218ENST00000489037 SLC10A2Q12908 348 aaPredicted RBP14.37□□□□□ -0.11
BRCA1-218ENST00000489037 FOXC1Q12948 553 aa14.37□□□□□ -0.11
BRCA1-218ENST00000489037 LRRC14Q15048 493 aa14.37□□□□□ -0.11
BRCA1-218ENST00000489037 KAZNQ674X7 775 aa14.37□□□□□ -0.11
BRCA1-218ENST00000489037 MFSD7Q6UXD7 560 aa14.37□□□□□ -0.11
BRCA1-218ENST00000489037 GATAD2AQ86YP4 633 aa14.37□□□□□ -0.11
BRCA1-218ENST00000489037 PLD5Q8N7P1 536 aa14.37□□□□□ -0.11
BRCA1-218ENST00000489037 TPCN2Q8NHX9 752 aa14.37□□□□□ -0.11
BRCA1-218ENST00000489037 KIAA1524Q8TCG1 905 aa14.37□□□□□ -0.11
BRCA1-218ENST00000489037 SAP25Q8TEE9 199 aa14.37□□□□□ -0.11
BRCA1-218ENST00000489037 KLF6Q99612 283 aaPredicted RBP14.37□□□□□ -0.11
BRCA1-218ENST00000489037 FTSJ1Q9UET6 329 aa14.37□□□□□ -0.11
BRCA1-218ENST00000489037 ANGPTL2Q9UKU9 493 aa14.37□□□□□ -0.11
BRCA1-218ENST00000489037 HTRA2O43464 458 aaPredicted RBP14.36□□□□□ -0.11
BRCA1-218ENST00000489037 TNFSF14O43557 240 aa14.36□□□□□ -0.11
BRCA1-218ENST00000489037 CBFA2T3O75081 653 aa14.36□□□□□ -0.11
BRCA1-218ENST00000489037 LDOC1O95751 146 aaPredicted RBP14.36□□□□□ -0.11
BRCA1-218ENST00000489037 PRKCGP05129 697 aa14.36□□□□□ -0.11
BRCA1-218ENST00000489037 PMLP29590 882 aa14.36□□□□□ -0.11
BRCA1-218ENST00000489037 NR2C2P49116 596 aa14.36□□□□□ -0.11
BRCA1-218ENST00000489037 EPHB1P54762 984 aa14.36□□□□□ -0.11
BRCA1-218ENST00000489037 HNRNPKP61978 463 aaKnown RBP eCLIP14.36□□□□□ -0.11
BRCA1-218ENST00000489037 PPIDQ08752 370 aaKnown RBP14.36□□□□□ -0.11
BRCA1-218ENST00000489037 BNIP3Q12983 259 aa14.36□□□□□ -0.11
BRCA1-218ENST00000489037 PDE1CQ14123 709 aaPredicted RBP14.36□□□□□ -0.11
BRCA1-218ENST00000489037 TFDP3Q5H9I0 405 aa14.36□□□□□ -0.11
BRCA1-218ENST00000489037 SPOCD1Q6ZMY3 1216 aa14.36□□□□□ -0.11
BRCA1-218ENST00000489037 USP45Q70EL2 814 aa14.36□□□□□ -0.11
BRCA1-218ENST00000489037 DPPA4Q7L190 304 aa14.36□□□□□ -0.11
BRCA1-218ENST00000489037 GLRX5Q86SX6 157 aa14.36□□□□□ -0.11
BRCA1-218ENST00000489037 ZSWIM9Q86XI8 627 aa14.36□□□□□ -0.11
BRCA1-218ENST00000489037 KATNAL2Q8IYT4 538 aa14.36□□□□□ -0.11
BRCA1-218ENST00000489037 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.36□□□□□ -0.11
BRCA1-218ENST00000489037 EID2Q8N6I1 236 aa14.36□□□□□ -0.11
BRCA1-218ENST00000489037 ACRBPQ8NEB7 543 aa14.36□□□□□ -0.11
BRCA1-218ENST00000489037 CENPTQ96BT3 561 aa14.36□□□□□ -0.11
BRCA1-218ENST00000489037 LGMNQ99538 433 aa14.36□□□□□ -0.11
BRCA1-218ENST00000489037 GOLPH3Q9H4A6 298 aa14.36□□□□□ -0.11
BRCA1-218ENST00000489037 DNAJC28Q9NX36 388 aa14.36□□□□□ -0.11
BRCA1-218ENST00000489037 KCTD5Q9NXV2 234 aa14.36□□□□□ -0.11
BRCA1-218ENST00000489037 BTBD3Q9Y2F9 522 aa14.36□□□□□ -0.11
BRCA1-218ENST00000489037 COQ6Q9Y2Z9 468 aa14.36□□□□□ -0.11
BRCA1-218ENST00000489037 RAI2Q9Y5P3 530 aa14.36□□□□□ -0.11
BRCA1-218ENST00000489037 SPTY2D1-AS1A0A0U1RR47 76 aa14.35□□□□□ -0.11
BRCA1-218ENST00000489037 NEMP2A6NFY4 417 aa14.35□□□□□ -0.11
BRCA1-218ENST00000489037 PJA2O43164 708 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms