RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 AQP12BA6NM10 295 aa2.64□□□□□ -1.99
CCDC93-209ENST00000488908 PLRG1O43660 514 aaKnown RBP2.64□□□□□ -1.99
CCDC93-209ENST00000488908 METTL18O95568 372 aa2.64□□□□□ -1.99
CCDC93-209ENST00000488908 SERPINC1P01008 464 aa2.64□□□□□ -1.99
CCDC93-209ENST00000488908 IGLV1-44P01699 117 aa2.64□□□□□ -1.99
CCDC93-209ENST00000488908 ACP5P13686 325 aa2.64□□□□□ -1.99
CCDC93-209ENST00000488908 USP8P40818 1118 aa2.64□□□□□ -1.99
CCDC93-209ENST00000488908 TMPOP42166 694 aaKnown RBP2.64□□□□□ -1.99
CCDC93-209ENST00000488908 PTPN9P43378 593 aa2.64□□□□□ -1.99
CCDC93-209ENST00000488908 MVDP53602 400 aa2.64□□□□□ -1.99
CCDC93-209ENST00000488908 SAFBQ15424 915 aaKnown RBP eCLIP2.64□□□□□ -1.99
CCDC93-209ENST00000488908 LRRC24Q50LG9 513 aa2.64□□□□□ -1.99
CCDC93-209ENST00000488908 GFRALQ6UXV0 394 aa2.64□□□□□ -1.99
CCDC93-209ENST00000488908 SYNE3Q6ZMZ3 975 aa2.64□□□□□ -1.99
CCDC93-209ENST00000488908 KMT5CQ86Y97 462 aa2.64□□□□□ -1.99
CCDC93-209ENST00000488908 FAM186BQ8IYM0 893 aa2.64□□□□□ -1.99
CCDC93-209ENST00000488908 FAM71BQ8TC56 605 aa2.64□□□□□ -1.99
CCDC93-209ENST00000488908 NCSTNQ92542 709 aa2.64□□□□□ -1.99
CCDC93-209ENST00000488908 LRR1Q96L50 414 aa2.64□□□□□ -1.99
CCDC93-209ENST00000488908 KATNAL1Q9BW62 490 aa2.64□□□□□ -1.99
CCDC93-209ENST00000488908 NAA15Q9BXJ9 866 aaKnown RBP2.64□□□□□ -1.99
CCDC93-209ENST00000488908 PDZD7Q9H5P4 517 aa2.64□□□□□ -1.99
CCDC93-209ENST00000488908 FKRPQ9H9S5 495 aa2.64□□□□□ -1.99
CCDC93-209ENST00000488908 IFT80Q9P2H3 777 aaPredicted RBP2.64□□□□□ -1.99
CCDC93-209ENST00000488908 NDRG3Q9UGV2 375 aa2.64□□□□□ -1.99
CCDC93-209ENST00000488908 ANO9A1A5B4 782 aa2.63□□□□□ -1.99
CCDC93-209ENST00000488908 PMM2O15305 246 aa2.63□□□□□ -1.99
CCDC93-209ENST00000488908 RGS11O94810 467 aa2.63□□□□□ -1.99
CCDC93-209ENST00000488908 ITGA2BP08514 1039 aa2.63□□□□□ -1.99
CCDC93-209ENST00000488908 CYP21A2P08686 494 aa2.63□□□□□ -1.99
CCDC93-209ENST00000488908 GPTP24298 496 aa2.63□□□□□ -1.99
CCDC93-209ENST00000488908 CHRNB4P30926 498 aa2.63□□□□□ -1.99
CCDC93-209ENST00000488908 HNRNPH1P31943 449 aaKnown RBP2.63□□□□□ -1.99
CCDC93-209ENST00000488908 HOXA1P49639 335 aaPredicted RBP2.63□□□□□ -1.99
CCDC93-209ENST00000488908 CLK1P49759 484 aaKnown RBP2.63□□□□□ -1.99
CCDC93-209ENST00000488908 ARSFP54793 590 aa2.63□□□□□ -1.99
CCDC93-209ENST00000488908 ARHGAP8P85298 464 aa2.63□□□□□ -1.99
CCDC93-209ENST00000488908 SFMBT2Q5VUG0 894 aa2.63□□□□□ -1.99
CCDC93-209ENST00000488908 SLC27A1Q6PCB7 646 aa2.63□□□□□ -1.99
CCDC93-209ENST00000488908 ZNF852Q6ZMS4 543 aa2.63□□□□□ -1.99
CCDC93-209ENST00000488908 NOTCH2NLQ7Z3S9 236 aa2.63□□□□□ -1.99
CCDC93-209ENST00000488908 TMEM219Q86XT9 240 aa2.63□□□□□ -1.99
CCDC93-209ENST00000488908 GHDCQ8N2G8 530 aa2.63□□□□□ -1.99
CCDC93-209ENST00000488908 FSIP1Q8NA03 581 aa2.63□□□□□ -1.99
CCDC93-209ENST00000488908 SETD9Q8NE22 299 aa2.63□□□□□ -1.99
CCDC93-209ENST00000488908 MAGEC3Q8TD91 643 aa2.63□□□□□ -1.99
CCDC93-209ENST00000488908 FAM222BQ8WU58 562 aa2.63□□□□□ -1.99
CCDC93-209ENST00000488908 STYXQ8WUJ0 223 aa2.63□□□□□ -1.99
CCDC93-209ENST00000488908 ZNF414Q96IQ9 312 aa2.63□□□□□ -1.99
CCDC93-209ENST00000488908 TRIM15Q9C019 465 aa2.63□□□□□ -1.99
CCDC93-209ENST00000488908 PCDH9Q9HC56 1237 aa2.63□□□□□ -1.99
CCDC93-209ENST00000488908 RPS10P5Q9NQ39 176 aa2.63□□□□□ -1.99
CCDC93-209ENST00000488908 MCM9Q9NXL9 1143 aa2.63□□□□□ -1.99
CCDC93-209ENST00000488908 A0A0J9YWU9 116 aa2.62□□□□□ -1.99
CCDC93-209ENST00000488908 NDUFAF8A1L188 74 aa2.62□□□□□ -1.99
CCDC93-209ENST00000488908 HHLA1C9JL84 531 aa2.62□□□□□ -1.99
CCDC93-209ENST00000488908 AKR1B15C9JRZ8 316 aaPredicted RBP2.62□□□□□ -1.99
CCDC93-209ENST00000488908 NR5A2O00482 541 aa2.62□□□□□ -1.99
CCDC93-209ENST00000488908 ATP2C2O75185 946 aa2.62□□□□□ -1.99
CCDC93-209ENST00000488908 NDUFB4O95168 129 aa2.62□□□□□ -1.99
CCDC93-209ENST00000488908 TNFRSF6BO95407 300 aa2.62□□□□□ -1.99
CCDC93-209ENST00000488908 TM4SF4P48230 202 aa2.62□□□□□ -1.99
CCDC93-209ENST00000488908 TERF1P54274 439 aa2.62□□□□□ -1.99
CCDC93-209ENST00000488908 GNB1P62873 340 aa2.62□□□□□ -1.99
CCDC93-209ENST00000488908 KCNT1Q5JUK3 1230 aa2.62□□□□□ -1.99
CCDC93-209ENST00000488908 KCTD8Q6ZWB6 473 aa2.62□□□□□ -1.99
CCDC93-209ENST00000488908 ANKRD52Q8NB46 1076 aa2.62□□□□□ -1.99
CCDC93-209ENST00000488908 SLC20A1Q8WUM9 679 aa2.62□□□□□ -1.99
CCDC93-209ENST00000488908 TMEM170AQ8WVE7 144 aa2.62□□□□□ -1.99
CCDC93-209ENST00000488908 C3orf49Q96BT1 292 aa2.62□□□□□ -1.99
CCDC93-209ENST00000488908 LINC00479Q96M42 142 aa2.62□□□□□ -1.99
CCDC93-209ENST00000488908 KXD1Q9BQD3 176 aa2.62□□□□□ -1.99
CCDC93-209ENST00000488908 SARGQ9BW04 601 aa2.62□□□□□ -1.99
CCDC93-209ENST00000488908 CDK19Q9BWU1 502 aa2.62□□□□□ -1.99
CCDC93-209ENST00000488908 C17orf75Q9HAS0 396 aa2.62□□□□□ -1.99
CCDC93-209ENST00000488908 CCDC177Q9NQR7 707 aaPredicted RBP2.62□□□□□ -1.99
CCDC93-209ENST00000488908 PRDM8Q9NQV8 689 aa2.62□□□□□ -1.99
CCDC93-209ENST00000488908 ENTPD7Q9NQZ7 604 aa2.62□□□□□ -1.99
CCDC93-209ENST00000488908 PDS5AQ29RF7 1337 aaKnown RBP2.62□□□□□ -1.99
CCDC93-209ENST00000488908 TYW5A2RUC4 315 aaKnown RBP2.61□□□□□ -1.99
CCDC93-209ENST00000488908 EBAG9O00559 213 aa2.61□□□□□ -1.99
CCDC93-209ENST00000488908 SEPT4O43236 478 aa2.61□□□□□ -1.99
CCDC93-209ENST00000488908 ACTL6BO94805 426 aa2.61□□□□□ -1.99
CCDC93-209ENST00000488908 MYL3P08590 195 aa2.61□□□□□ -1.99
CCDC93-209ENST00000488908 GNL1P36915 607 aaPredicted RBP2.61□□□□□ -1.99
CCDC93-209ENST00000488908 PNPLA4P41247 253 aa2.61□□□□□ -1.99
CCDC93-209ENST00000488908 AP2B1P63010 937 aa2.61□□□□□ -1.99
CCDC93-209ENST00000488908 THOC5Q13769 683 aaKnown RBP2.61□□□□□ -1.99
CCDC93-209ENST00000488908 SPARCL1Q14515 664 aa2.61□□□□□ -1.99
CCDC93-209ENST00000488908 ARHGEF6Q15052 776 aa2.61□□□□□ -1.99
CCDC93-209ENST00000488908 TRNP1Q6NT89 227 aa2.61□□□□□ -1.99
CCDC93-209ENST00000488908 FAAP20Q6NZ36 180 aa2.61□□□□□ -1.99
CCDC93-209ENST00000488908 KRTAP5-5Q701N2 237 aaPredicted RBP2.61□□□□□ -1.99
CCDC93-209ENST00000488908 WDR75Q8IWA0 830 aaKnown RBP2.61□□□□□ -1.99
CCDC93-209ENST00000488908 SLC44A2Q8IWA5 706 aaPredicted RBP2.61□□□□□ -1.99
CCDC93-209ENST00000488908 SYTL1Q8IYJ3 562 aa2.61□□□□□ -1.99
CCDC93-209ENST00000488908 DNAAF1Q8NEP3 725 aa2.61□□□□□ -1.99
CCDC93-209ENST00000488908 WDR20Q8TBZ3 569 aa2.61□□□□□ -1.99
CCDC93-209ENST00000488908 ERGIC1Q969X5 290 aa2.61□□□□□ -1.99
CCDC93-209ENST00000488908 EID2BQ96D98 161 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms