RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 PPP6R3Q5H9R7 873 aaPredicted RBP13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 C6orf132Q5T0Z8 1188 aa13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 FAXCQ5TGI0 409 aa13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 TMCO4Q5TGY1 634 aa13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 LVRNQ6Q4G3 990 aa13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 SRLQ86TD4 932 aa13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 CAMK1DQ8IU85 385 aa13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 RBFAQ8N0V3 343 aa13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 LSMEM2Q8N112 164 aa13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 FSTL5Q8N475 847 aaPredicted RBP13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 TSEN2Q8NCE0 465 aaKnown RBP13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 ATL2Q8NHH9 583 aa13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 WDR48Q8TAF3 677 aa13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 MAPK15Q8TD08 544 aa13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 SPOCK2Q92563 424 aa13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 SYN2Q92777 582 aaPredicted RBP13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 ZNF599Q96NL3 588 aa13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 DCBLD2Q96PD2 775 aa13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 PSKH2Q96QS6 385 aa13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 LRRC61Q9BV99 259 aa13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 SP110Q9HB58 689 aa13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 SEPT3Q9UH03 358 aa13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 SMG1Q96Q15 3661 aaKnown RBP13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 NBEAQ8NFP9 2946 aa13.16□□□□□ -0.3
ATPAF2-207ENST00000488753 A0A1W2PQ67 120 aa13.16□□□□□ -0.3
ATPAF2-207ENST00000488753 A0A1W2PQJ5 194 aa13.16□□□□□ -0.3
ATPAF2-207ENST00000488753 H3BRJ5 948 aa13.16□□□□□ -0.3
ATPAF2-207ENST00000488753 GCATO75600 419 aa13.16□□□□□ -0.3
ATPAF2-207ENST00000488753 TCEA3O75764 348 aa13.16□□□□□ -0.3
ATPAF2-207ENST00000488753 ANXA6P08133 673 aa13.16□□□□□ -0.3
ATPAF2-207ENST00000488753 ALPIP09923 528 aa13.16□□□□□ -0.3
ATPAF2-207ENST00000488753 MYF5P13349 255 aa13.16□□□□□ -0.3
ATPAF2-207ENST00000488753 HOXB3P14651 431 aaPredicted RBP13.16□□□□□ -0.3
ATPAF2-207ENST00000488753 RGRP47804 291 aa13.16□□□□□ -0.3
ATPAF2-207ENST00000488753 LSSP48449 732 aa13.16□□□□□ -0.3
ATPAF2-207ENST00000488753 LIG3P49916 1009 aa13.16□□□□□ -0.3
ATPAF2-207ENST00000488753 HK3P52790 923 aa13.16□□□□□ -0.3
ATPAF2-207ENST00000488753 ADKP55263 362 aaKnown RBP13.16□□□□□ -0.3
ATPAF2-207ENST00000488753 AP1S1P61966 158 aa13.16□□□□□ -0.3
ATPAF2-207ENST00000488753 TPM4P67936 248 aa13.16□□□□□ -0.3
ATPAF2-207ENST00000488753 BCL2L1Q07817 233 aa13.16□□□□□ -0.3
ATPAF2-207ENST00000488753 MTM1Q13496 603 aa13.16□□□□□ -0.3
ATPAF2-207ENST00000488753 NFATC4Q14934 902 aa13.16□□□□□ -0.3
ATPAF2-207ENST00000488753 ELOCQ15369 112 aa13.16□□□□□ -0.3
ATPAF2-207ENST00000488753 CDKN3Q16667 212 aa13.16□□□□□ -0.3
ATPAF2-207ENST00000488753 GUSBP11Q6P575 273 aa13.16□□□□□ -0.3
ATPAF2-207ENST00000488753 NPWQ8N729 165 aa13.16□□□□□ -0.3
ATPAF2-207ENST00000488753 IQCDQ96DY2 449 aa13.16□□□□□ -0.3
ATPAF2-207ENST00000488753 ZNF578Q96N58 590 aaPredicted RBP13.16□□□□□ -0.3
ATPAF2-207ENST00000488753 TCEAL2Q9H3H9 227 aaPredicted RBP13.16□□□□□ -0.3
ATPAF2-207ENST00000488753 CWC15Q9P013 229 aaKnown RBP13.16□□□□□ -0.3
ATPAF2-207ENST00000488753 PNMA8BQ9ULN7 279 aaPredicted RBP13.16□□□□□ -0.3
ATPAF2-207ENST00000488753 PCDHB1Q9Y5F3 818 aa13.16□□□□□ -0.3
ATPAF2-207ENST00000488753 CPED1A4D0V7 1026 aa13.15□□□□□ -0.3
ATPAF2-207ENST00000488753 DFFAO00273 331 aa13.15□□□□□ -0.3
ATPAF2-207ENST00000488753 YY2O15391 372 aa13.15□□□□□ -0.3
ATPAF2-207ENST00000488753 CSO75390 466 aaKnown RBP13.15□□□□□ -0.3
ATPAF2-207ENST00000488753 RASGRP1O95267 797 aa13.15□□□□□ -0.3
ATPAF2-207ENST00000488753 TSHRP16473 764 aa13.15□□□□□ -0.3
ATPAF2-207ENST00000488753 HSPA9P38646 679 aaKnown RBP13.15□□□□□ -0.3
ATPAF2-207ENST00000488753 ARL4AP40617 200 aa13.15□□□□□ -0.3
ATPAF2-207ENST00000488753 PIGHQ14442 188 aaPredicted RBP13.15□□□□□ -0.3
ATPAF2-207ENST00000488753 INPP5AQ14642 412 aa13.15□□□□□ -0.3
ATPAF2-207ENST00000488753 ISXQ2M1V0 245 aa13.15□□□□□ -0.3
ATPAF2-207ENST00000488753 ALG11Q2TAA5 492 aa13.15□□□□□ -0.3
ATPAF2-207ENST00000488753 SOWAHCQ53LP3 525 aaPredicted RBP13.15□□□□□ -0.3
ATPAF2-207ENST00000488753 ESRP1Q6NXG1 681 aaKnown RBP13.15□□□□□ -0.3
ATPAF2-207ENST00000488753 IGF2-ASQ6U949 168 aa13.15□□□□□ -0.3
ATPAF2-207ENST00000488753 EFL1Q7Z2Z2 1120 aaKnown RBP13.15□□□□□ -0.3
ATPAF2-207ENST00000488753 ZSWIM9Q86XI8 627 aa13.15□□□□□ -0.3
ATPAF2-207ENST00000488753 NIPA2Q8N8Q9 360 aa13.15□□□□□ -0.3
ATPAF2-207ENST00000488753 TEKT4Q8WW24 435 aa13.15□□□□□ -0.3
ATPAF2-207ENST00000488753 SCG3Q8WXD2 468 aaKnown RBP13.15□□□□□ -0.3
ATPAF2-207ENST00000488753 APOOQ9BUR5 198 aa13.15□□□□□ -0.3
ATPAF2-207ENST00000488753 CLPBQ9H078 707 aa13.15□□□□□ -0.3
ATPAF2-207ENST00000488753 POLR1BQ9H9Y6 1135 aa13.15□□□□□ -0.3
ATPAF2-207ENST00000488753 COQ6Q9Y2Z9 468 aa13.15□□□□□ -0.3
ATPAF2-207ENST00000488753 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.14□□□□□ -0.31
ATPAF2-207ENST00000488753 TRAFD1O14545 582 aaPredicted RBP13.14□□□□□ -0.31
ATPAF2-207ENST00000488753 USP12O75317 370 aa13.14□□□□□ -0.31
ATPAF2-207ENST00000488753 HOXC4P09017 264 aaPredicted RBP13.14□□□□□ -0.31
ATPAF2-207ENST00000488753 SKILP12757 684 aa13.14□□□□□ -0.31
ATPAF2-207ENST00000488753 TGM2P21980 687 aa13.14□□□□□ -0.31
ATPAF2-207ENST00000488753 IL1R2P27930 398 aa13.14□□□□□ -0.31
ATPAF2-207ENST00000488753 PBX1P40424 430 aa13.14□□□□□ -0.31
ATPAF2-207ENST00000488753 SCNN1BP51168 640 aa13.14□□□□□ -0.31
ATPAF2-207ENST00000488753 ERVPABLB-1P60509 514 aa13.14□□□□□ -0.31
ATPAF2-207ENST00000488753 RALGDSQ12967 914 aa13.14□□□□□ -0.31
ATPAF2-207ENST00000488753 C1orf61Q13536 156 aa13.14□□□□□ -0.31
ATPAF2-207ENST00000488753 LBRQ14739 615 aaKnown RBP13.14□□□□□ -0.31
ATPAF2-207ENST00000488753 TDRD12Q587J7 1177 aaKnown RBP13.14□□□□□ -0.31
ATPAF2-207ENST00000488753 RALGPS1Q5JS13 557 aa13.14□□□□□ -0.31
ATPAF2-207ENST00000488753 HGSNATQ68CP4 663 aa13.14□□□□□ -0.31
ATPAF2-207ENST00000488753 TMCO3Q6UWJ1 677 aa13.14□□□□□ -0.31
ATPAF2-207ENST00000488753 ENPP7Q6UWV6 458 aa13.14□□□□□ -0.31
ATPAF2-207ENST00000488753 LIPIQ6XZB0 460 aa13.14□□□□□ -0.31
ATPAF2-207ENST00000488753 RBM44Q6ZP01 1051 aaKnown RBP13.14□□□□□ -0.31
ATPAF2-207ENST00000488753 ARHGAP36Q6ZRI8 547 aa13.14□□□□□ -0.31
ATPAF2-207ENST00000488753 POLNQ7Z5Q5 900 aa13.14□□□□□ -0.31
ATPAF2-207ENST00000488753 SLC35F3Q8IY50 421 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms