RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 ZNF235Q14590 738 aa14.31□□□□□ -0.12
COL9A2-208ENST00000488463 IFI16Q16666 785 aaKnown RBP14.31□□□□□ -0.12
COL9A2-208ENST00000488463 MARC1Q5VT66 337 aa14.31□□□□□ -0.12
COL9A2-208ENST00000488463 C11orf63Q6NUN7 778 aa14.31□□□□□ -0.12
COL9A2-208ENST00000488463 MFSD7Q6UXD7 560 aa14.31□□□□□ -0.12
COL9A2-208ENST00000488463 Q6ZSR6 202 aa14.31□□□□□ -0.12
COL9A2-208ENST00000488463 SLCO6A1Q86UG4 719 aa14.31□□□□□ -0.12
COL9A2-208ENST00000488463 RHOT1Q8IXI2 618 aa14.31□□□□□ -0.12
COL9A2-208ENST00000488463 TP53I13Q8NBR0 393 aaPredicted RBP14.31□□□□□ -0.12
COL9A2-208ENST00000488463 FAM174AQ8TBP5 190 aa14.31□□□□□ -0.12
COL9A2-208ENST00000488463 OLFM3Q96PB7 478 aa14.31□□□□□ -0.12
COL9A2-208ENST00000488463 WRAP53Q9BUR4 548 aaKnown RBP14.31□□□□□ -0.12
COL9A2-208ENST00000488463 LACRTQ9GZZ8 138 aa14.31□□□□□ -0.12
COL9A2-208ENST00000488463 MBNL1Q9NR56 388 aaKnown RBP14.31□□□□□ -0.12
COL9A2-208ENST00000488463 ATP8A1Q9Y2Q0 1164 aa14.31□□□□□ -0.12
COL9A2-208ENST00000488463 PCDHGC4Q9Y5F7 938 aa14.31□□□□□ -0.12
COL9A2-208ENST00000488463 DUSP10Q9Y6W6 482 aa14.31□□□□□ -0.12
COL9A2-208ENST00000488463 CHD6Q8TD26 2715 aa14.31□□□□□ -0.12
COL9A2-208ENST00000488463 PTPRBP23467 1997 aa14.31□□□□□ -0.12
COL9A2-208ENST00000488463 CFAP47Q6ZTR5 3102 aa14.3□□□□□ -0.12
COL9A2-208ENST00000488463 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.3□□□□□ -0.12
COL9A2-208ENST00000488463 A6NNZ2 444 aa14.3□□□□□ -0.12
COL9A2-208ENST00000488463 BTNL10A8MVZ5 291 aa14.3□□□□□ -0.12
COL9A2-208ENST00000488463 YKT6O15498 198 aa14.3□□□□□ -0.12
COL9A2-208ENST00000488463 PJA2O43164 708 aa14.3□□□□□ -0.12
COL9A2-208ENST00000488463 PSTPIP1O43586 416 aa14.3□□□□□ -0.12
COL9A2-208ENST00000488463 SOCS5O75159 536 aa14.3□□□□□ -0.12
COL9A2-208ENST00000488463 KRT1P04264 644 aa14.3□□□□□ -0.12
COL9A2-208ENST00000488463 GIMD1P0DJR0 217 aa14.3□□□□□ -0.12
COL9A2-208ENST00000488463 C6P13671 934 aa14.3□□□□□ -0.12
COL9A2-208ENST00000488463 GRK6P43250 576 aa14.3□□□□□ -0.12
COL9A2-208ENST00000488463 MARCKSL1P49006 195 aa14.3□□□□□ -0.12
COL9A2-208ENST00000488463 LIG3P49916 1009 aa14.3□□□□□ -0.12
COL9A2-208ENST00000488463 ADCY2Q08462 1091 aa14.3□□□□□ -0.12
COL9A2-208ENST00000488463 ELP6Q0PNE2 266 aa14.3□□□□□ -0.12
COL9A2-208ENST00000488463 SGCGQ13326 291 aa14.3□□□□□ -0.12
COL9A2-208ENST00000488463 FZD2Q14332 565 aa14.3□□□□□ -0.12
COL9A2-208ENST00000488463 SUZ12Q15022 739 aaKnown RBP14.3□□□□□ -0.12
COL9A2-208ENST00000488463 SPA17Q15506 151 aa14.3□□□□□ -0.12
COL9A2-208ENST00000488463 RALGPS1Q5JS13 557 aa14.3□□□□□ -0.12
COL9A2-208ENST00000488463 CBARPQ8N350 705 aaPredicted RBP14.3□□□□□ -0.12
COL9A2-208ENST00000488463 SLC25A45Q8N413 288 aa14.3□□□□□ -0.12
COL9A2-208ENST00000488463 OXR1Q8N573 874 aa14.3□□□□□ -0.12
COL9A2-208ENST00000488463 ACRBPQ8NEB7 543 aa14.3□□□□□ -0.12
COL9A2-208ENST00000488463 TPCN2Q8NHX9 752 aa14.3□□□□□ -0.12
COL9A2-208ENST00000488463 ARRDC2Q8TBH0 407 aa14.3□□□□□ -0.12
COL9A2-208ENST00000488463 RHBDD1Q8TEB9 315 aa14.3□□□□□ -0.12
COL9A2-208ENST00000488463 SETD7Q8WTS6 366 aaKnown RBP14.3□□□□□ -0.12
COL9A2-208ENST00000488463 HDAC11Q96DB2 347 aa14.3□□□□□ -0.12
COL9A2-208ENST00000488463 LGMNQ99538 433 aa14.3□□□□□ -0.12
COL9A2-208ENST00000488463 NT5MQ9NPB1 228 aa14.3□□□□□ -0.12
COL9A2-208ENST00000488463 KLF15Q9UIH9 416 aa14.3□□□□□ -0.12
COL9A2-208ENST00000488463 PNMA8BQ9ULN7 279 aaPredicted RBP14.3□□□□□ -0.12
COL9A2-208ENST00000488463 COQ6Q9Y2Z9 468 aa14.3□□□□□ -0.12
COL9A2-208ENST00000488463 CELSR3Q9NYQ7 3312 aa14.3□□□□□ -0.12
COL9A2-208ENST00000488463 ITPR1Q14643 2758 aa14.3□□□□□ -0.12
COL9A2-208ENST00000488463 LRP4O75096 1905 aa14.29□□□□□ -0.12
COL9A2-208ENST00000488463 PLXNB3Q9ULL4 1909 aa14.29□□□□□ -0.12
COL9A2-208ENST00000488463 PKD1L2Q7Z442 2459 aa14.29□□□□□ -0.12
COL9A2-208ENST00000488463 SPTY2D1-AS1A0A0U1RR47 76 aa14.29□□□□□ -0.12
COL9A2-208ENST00000488463 CFAP69A5D8W1 941 aa14.29□□□□□ -0.12
COL9A2-208ENST00000488463 FZD6O60353 706 aa14.29□□□□□ -0.12
COL9A2-208ENST00000488463 TM7SF2O76062 418 aa14.29□□□□□ -0.12
COL9A2-208ENST00000488463 FTH1P19P0C7X4 201 aa14.29□□□□□ -0.12
COL9A2-208ENST00000488463 NOP2P46087 812 aaKnown RBP14.29□□□□□ -0.12
COL9A2-208ENST00000488463 ARRB1P49407 418 aaPredicted RBP14.29□□□□□ -0.12
COL9A2-208ENST00000488463 PPIDQ08752 370 aaKnown RBP14.29□□□□□ -0.12
COL9A2-208ENST00000488463 WSCD2Q2TBF2 565 aa14.29□□□□□ -0.12
COL9A2-208ENST00000488463 FAM182AQ5T1J6 154 aa14.29□□□□□ -0.12
COL9A2-208ENST00000488463 NPNTQ6UXI9 565 aa14.29□□□□□ -0.12
COL9A2-208ENST00000488463 LIPIQ6XZB0 460 aa14.29□□□□□ -0.12
COL9A2-208ENST00000488463 DPPA4Q7L190 304 aa14.29□□□□□ -0.12
COL9A2-208ENST00000488463 RAB44Q7Z6P3 723 aaPredicted RBP14.29□□□□□ -0.12
COL9A2-208ENST00000488463 DCP2Q8IU60 420 aaKnown RBP14.29□□□□□ -0.12
COL9A2-208ENST00000488463 CNTD1Q8N815 330 aa14.29□□□□□ -0.12
COL9A2-208ENST00000488463 CXorf40AQ8TE69 158 aa14.29□□□□□ -0.12
COL9A2-208ENST00000488463 RNF25Q96BH1 459 aaPredicted RBP14.29□□□□□ -0.12
COL9A2-208ENST00000488463 IFT43Q96FT9 208 aa14.29□□□□□ -0.12
COL9A2-208ENST00000488463 MCCC1Q96RQ3 725 aaPredicted RBP14.29□□□□□ -0.12
COL9A2-208ENST00000488463 IL12RB2Q99665 862 aa14.29□□□□□ -0.12
COL9A2-208ENST00000488463 SCUBE2Q9NQ36 999 aa14.29□□□□□ -0.12
COL9A2-208ENST00000488463 DDX56Q9NY93 547 aaKnown RBP14.29□□□□□ -0.12
COL9A2-208ENST00000488463 IMPACTQ9P2X3 320 aa14.29□□□□□ -0.12
COL9A2-208ENST00000488463 AMACRQ9UHK6 382 aa14.29□□□□□ -0.12
COL9A2-208ENST00000488463 PPIL1Q9Y3C6 166 aa14.29□□□□□ -0.12
COL9A2-208ENST00000488463 A0A0U1RQJ8 604 aa14.28□□□□□ -0.12
COL9A2-208ENST00000488463 FPGTO14772 594 aa14.28□□□□□ -0.12
COL9A2-208ENST00000488463 SPOPO43791 374 aa14.28□□□□□ -0.12
COL9A2-208ENST00000488463 PGLSO95336 258 aa14.28□□□□□ -0.12
COL9A2-208ENST00000488463 HLA-DQB2P05538 268 aa14.28□□□□□ -0.12
COL9A2-208ENST00000488463 ATXN1LP0C7T5 689 aaKnown RBP14.28□□□□□ -0.12
COL9A2-208ENST00000488463 CCNB1P14635 433 aa14.28□□□□□ -0.12
COL9A2-208ENST00000488463 MX2P20592 715 aa14.28□□□□□ -0.12
COL9A2-208ENST00000488463 RABIFP47224 123 aa14.28□□□□□ -0.12
COL9A2-208ENST00000488463 IFI35P80217 286 aaPredicted RBP14.28□□□□□ -0.12
COL9A2-208ENST00000488463 NIPAL4Q0D2K0 466 aa14.28□□□□□ -0.12
COL9A2-208ENST00000488463 ZBTB17Q13105 803 aa14.28□□□□□ -0.12
COL9A2-208ENST00000488463 PTPRRQ15256 657 aa14.28□□□□□ -0.12
COL9A2-208ENST00000488463 TIGD7Q6NT04 549 aaPredicted RBP14.28□□□□□ -0.12
COL9A2-208ENST00000488463 ERAP2Q6P179 960 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms