RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 ERAP2Q6P179 960 aa11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 GUSBP11Q6P575 273 aa11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 ENPP7Q6UWV6 458 aa11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 EFL1Q7Z2Z2 1120 aaKnown RBP11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 PDZD3Q86UT5 571 aa11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 HID1Q8IV36 788 aa11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 MAPK15Q8TD08 544 aa11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 TSACCQ96A04 125 aaPredicted RBP11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 EIF3CQ99613 913 aaKnown RBP11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 LRRC61Q9BV99 259 aa11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 DUSP23Q9BVJ7 150 aa11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 NUP85Q9BW27 656 aa11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 SLC13A1Q9BZW2 595 aa11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 ATP13A3Q9H7F0 1226 aa11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 IFNKQ9P0W0 207 aa11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 SPASTQ9UBP0 616 aa11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 ANAPC7Q9UJX3 599 aa11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 ATP8A1Q9Y2Q0 1164 aa11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 AHCTF1Q8WYP5 2266 aa11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 A0A087X0T9 212 aa11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 TSPAN11A1L157 253 aa11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 BRINP1O60477 761 aa11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 SERPING1P05155 500 aa11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 ANXA6P08133 673 aa11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 FAM228BP0C875 321 aa11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 TSHRP16473 764 aa11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 SERPINA4P29622 427 aa11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 PCK1P35558 622 aa11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 MMP12P39900 470 aa11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 PBX1P40424 430 aa11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 DUSP3P51452 185 aaPredicted RBP11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 YPEL5P62699 121 aa11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 PPARDQ03181 441 aa11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 BCL2L1Q07817 233 aa11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 ZNF235Q14590 738 aa11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 INPP5AQ14642 412 aa11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 LBRQ14739 615 aaKnown RBP11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 FIGNQ5HY92 759 aa11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 ZCCHC8Q6NZY4 707 aaKnown RBP11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 BRAT1Q6PJG6 821 aa11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 TMCO3Q6UWJ1 677 aa11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 MACC1Q6ZN28 852 aa11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 POLNQ7Z5Q5 900 aa11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 CPNE8Q86YQ8 564 aa11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 PSTKQ8IV42 348 aaKnown RBP11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 DCBLD1Q8N8Z6 715 aa11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 FAM181AQ8N9Y4 354 aa11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 PLA2G15Q8NCC3 412 aa11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 PDCD6IPQ8WUM4 868 aaKnown RBP11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 BTN2A2Q8WVV5 523 aa11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 RFFLQ8WZ73 363 aa11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 ZNF641Q96N77 438 aaPredicted RBP11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 TUBGCP5Q96RT8 1024 aa11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 APOOQ9BUR5 198 aa11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 NRSN2Q9GZP1 204 aa11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 CLPBQ9H078 707 aa11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 SYNDIG1Q9H7V2 258 aa11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 SIRPGQ9P1W8 387 aa11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 GULP1Q9UBP9 304 aa11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 DOLKQ9UPQ8 538 aa11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 OR1A2Q9Y585 309 aa11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 CSNK1G3Q9Y6M4 447 aa11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 FASNP49327 2511 aaKnown RBP11.38□□□□□ -0.59
NIPAL3-207ENST00000488155 ATRXP46100 2492 aa11.37□□□□□ -0.59
NIPAL3-207ENST00000488155 YY2O15391 372 aa11.37□□□□□ -0.59
NIPAL3-207ENST00000488155 CSO75390 466 aaKnown RBP11.37□□□□□ -0.59
NIPAL3-207ENST00000488155 MPOP05164 745 aa11.37□□□□□ -0.59
NIPAL3-207ENST00000488155 ELFN1P0C7U0 828 aa11.37□□□□□ -0.59
NIPAL3-207ENST00000488155 CTSEP14091 401 aa11.37□□□□□ -0.59
NIPAL3-207ENST00000488155 TGM2P21980 687 aa11.37□□□□□ -0.59
NIPAL3-207ENST00000488155 EIF2S3P41091 472 aaKnown RBP11.37□□□□□ -0.59
NIPAL3-207ENST00000488155 CSNK1DP48730 415 aa11.37□□□□□ -0.59
NIPAL3-207ENST00000488155 HCAR3P49019 387 aa11.37□□□□□ -0.59
NIPAL3-207ENST00000488155 CDH6P55285 790 aa11.37□□□□□ -0.59
NIPAL3-207ENST00000488155 MAXP61244 160 aa11.37□□□□□ -0.59
NIPAL3-207ENST00000488155 ZBED6P86452 979 aa11.37□□□□□ -0.59
NIPAL3-207ENST00000488155 RALGDSQ12967 914 aa11.37□□□□□ -0.59
NIPAL3-207ENST00000488155 MMRN1Q13201 1228 aa11.37□□□□□ -0.59
NIPAL3-207ENST00000488155 KRT81Q14533 505 aa11.37□□□□□ -0.59
NIPAL3-207ENST00000488155 RTP5Q14D33 572 aa11.37□□□□□ -0.59
NIPAL3-207ENST00000488155 DPYSL2Q16555 572 aa11.37□□□□□ -0.59
NIPAL3-207ENST00000488155 ATP13A4Q4VNC1 1196 aa11.37□□□□□ -0.59
NIPAL3-207ENST00000488155 BOLA3Q53S33 107 aa11.37□□□□□ -0.59
NIPAL3-207ENST00000488155 PERM1Q5SV97 790 aa11.37□□□□□ -0.59
NIPAL3-207ENST00000488155 CCDC122Q5T0U0 273 aa11.37□□□□□ -0.59
NIPAL3-207ENST00000488155 DENND2CQ68D51 928 aa11.37□□□□□ -0.59
NIPAL3-207ENST00000488155 KCTD16Q68DU8 428 aa11.37□□□□□ -0.59
NIPAL3-207ENST00000488155 SLC35F3Q8IY50 421 aa11.37□□□□□ -0.59
NIPAL3-207ENST00000488155 PGBD5Q8N414 524 aa11.37□□□□□ -0.59
NIPAL3-207ENST00000488155 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.37□□□□□ -0.59
NIPAL3-207ENST00000488155 HCAR2Q8TDS4 363 aa11.37□□□□□ -0.59
NIPAL3-207ENST00000488155 NAF1Q96HR8 494 aaKnown RBP11.37□□□□□ -0.59
NIPAL3-207ENST00000488155 CSPG4P5Q96PW8 444 aa11.37□□□□□ -0.59
NIPAL3-207ENST00000488155 PCDH18Q9HCL0 1135 aa11.37□□□□□ -0.59
NIPAL3-207ENST00000488155 EVA1BQ9NVM1 165 aa11.37□□□□□ -0.59
NIPAL3-207ENST00000488155 SEPT3Q9UH03 358 aa11.37□□□□□ -0.59
NIPAL3-207ENST00000488155 SALL4Q9UJQ4 1053 aa11.37□□□□□ -0.59
NIPAL3-207ENST00000488155 CAPN11Q9UMQ6 739 aa11.37□□□□□ -0.59
NIPAL3-207ENST00000488155 LUC7L2Q9Y383 392 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms