RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 ASAH2Q9NR71 780 aa4.69□□□□□ -1.66
CNN3-206ENST00000487539 TM7SF3Q9NS93 570 aa4.69□□□□□ -1.66
CNN3-206ENST00000487539 NRBP2Q9NSY0 501 aa4.69□□□□□ -1.66
CNN3-206ENST00000487539 STARD5Q9NSY2 213 aa4.69□□□□□ -1.66
CNN3-206ENST00000487539 CFAP97Q9P2B7 532 aa4.69□□□□□ -1.66
CNN3-206ENST00000487539 MMP17Q9ULZ9 603 aa4.69□□□□□ -1.66
CNN3-206ENST00000487539 DMTF1Q9Y222 760 aa4.69□□□□□ -1.66
CNN3-206ENST00000487539 PCDHA10Q9Y5I2 948 aa4.69□□□□□ -1.66
CNN3-206ENST00000487539 TRIP11Q15643 1979 aa4.69□□□□□ -1.66
CNN3-206ENST00000487539 NUP210Q8TEM1 1887 aaPredicted RBP4.69□□□□□ -1.66
CNN3-206ENST00000487539 TMEM131Q92545 1883 aa4.69□□□□□ -1.66
CNN3-206ENST00000487539 MYOFQ9NZM1 2061 aa4.68□□□□□ -1.66
CNN3-206ENST00000487539 MED13LQ71F56 2210 aa4.68□□□□□ -1.66
CNN3-206ENST00000487539 IGHV1OR15-9A0A0B4J2B8 117 aa4.68□□□□□ -1.66
CNN3-206ENST00000487539 A0A1W2PS29 197 aa4.68□□□□□ -1.66
CNN3-206ENST00000487539 E9PAM4 449 aa4.68□□□□□ -1.66
CNN3-206ENST00000487539 F2RL2O00254 374 aa4.68□□□□□ -1.66
CNN3-206ENST00000487539 IPO5O00410 1097 aaKnown RBP4.68□□□□□ -1.66
CNN3-206ENST00000487539 EDIL3O43854 480 aa4.68□□□□□ -1.66
CNN3-206ENST00000487539 KLF8O95600 359 aaPredicted RBP4.68□□□□□ -1.66
CNN3-206ENST00000487539 FTLP02792 175 aaPredicted RBP4.68□□□□□ -1.66
CNN3-206ENST00000487539 OR4Q2P0C623 313 aa4.68□□□□□ -1.66
CNN3-206ENST00000487539 PF4V1P10720 104 aa4.68□□□□□ -1.66
CNN3-206ENST00000487539 ELAVL4P26378 380 aaKnown RBP4.68□□□□□ -1.66
CNN3-206ENST00000487539 TNFRSF8P28908 595 aa4.68□□□□□ -1.66
CNN3-206ENST00000487539 HOXD12P35452 270 aa4.68□□□□□ -1.66
CNN3-206ENST00000487539 OPRD1P41143 372 aa4.68□□□□□ -1.66
CNN3-206ENST00000487539 MCM2P49736 904 aa4.68□□□□□ -1.66
CNN3-206ENST00000487539 VAV2P52735 878 aa4.68□□□□□ -1.66
CNN3-206ENST00000487539 HK3P52790 923 aa4.68□□□□□ -1.66
CNN3-206ENST00000487539 EPHB1P54762 984 aa4.68□□□□□ -1.66
CNN3-206ENST00000487539 TMPRSS3P57727 454 aa4.68□□□□□ -1.66
CNN3-206ENST00000487539 GRIK3Q13003 919 aa4.68□□□□□ -1.66
CNN3-206ENST00000487539 HLA-BQ31612 363 aa4.68□□□□□ -1.66
CNN3-206ENST00000487539 PLA2G4FQ68DD2 849 aa4.68□□□□□ -1.66
CNN3-206ENST00000487539 SP5Q6BEB4 398 aaPredicted RBP4.68□□□□□ -1.66
CNN3-206ENST00000487539 RTL10Q7L3V2 364 aa4.68□□□□□ -1.66
CNN3-206ENST00000487539 CLNKQ7Z7G1 428 aa4.68□□□□□ -1.66
CNN3-206ENST00000487539 TMPRSS12Q86WS5 348 aa4.68□□□□□ -1.66
CNN3-206ENST00000487539 SRBD1Q8N5C6 995 aaKnown RBP4.68□□□□□ -1.66
CNN3-206ENST00000487539 BEND2Q8NDZ0 799 aa4.68□□□□□ -1.66
CNN3-206ENST00000487539 PRPF31Q8WWY3 499 aaKnown RBP4.68□□□□□ -1.66
CNN3-206ENST00000487539 LINC00476Q8WZB0 136 aa4.68□□□□□ -1.66
CNN3-206ENST00000487539 USP13Q92995 863 aaPredicted RBP4.68□□□□□ -1.66
CNN3-206ENST00000487539 CD101Q93033 1021 aa4.68□□□□□ -1.66
CNN3-206ENST00000487539 SCAMP4Q969E2 229 aa4.68□□□□□ -1.66
CNN3-206ENST00000487539 HIC2Q96JB3 615 aa4.68□□□□□ -1.66
CNN3-206ENST00000487539 MAP3K14Q99558 947 aa4.68□□□□□ -1.66
CNN3-206ENST00000487539 PI4K2AQ9BTU6 479 aa4.68□□□□□ -1.66
CNN3-206ENST00000487539 SIK2Q9H0K1 926 aa4.68□□□□□ -1.66
CNN3-206ENST00000487539 LINC00597Q9H2U6 94 aa4.68□□□□□ -1.66
CNN3-206ENST00000487539 SYBUQ9NX95 663 aa4.68□□□□□ -1.66
CNN3-206ENST00000487539 HSFX1Q9UBD0 423 aa4.68□□□□□ -1.66
CNN3-206ENST00000487539 FEZ2Q9UHY8 353 aaPredicted RBP4.68□□□□□ -1.66
CNN3-206ENST00000487539 FBXL5Q9UKA1 691 aa4.68□□□□□ -1.66
CNN3-206ENST00000487539 PNMA8BQ9ULN7 279 aaPredicted RBP4.68□□□□□ -1.66
CNN3-206ENST00000487539 CDYLQ9Y232 598 aa4.68□□□□□ -1.66
CNN3-206ENST00000487539 SPG11Q96JI7 2443 aa4.68□□□□□ -1.66
CNN3-206ENST00000487539 OTOGQ6ZRI0 2925 aa4.68□□□□□ -1.66
CNN3-206ENST00000487539 ARID2Q68CP9 1835 aa4.67□□□□□ -1.66
CNN3-206ENST00000487539 CELSR2Q9HCU4 2923 aa4.67□□□□□ -1.66
CNN3-206ENST00000487539 TRGV11A0A075B6L2 103 aa4.67□□□□□ -1.66
CNN3-206ENST00000487539 PRAMEF33A0A0G2JMD5 474 aa4.67□□□□□ -1.66
CNN3-206ENST00000487539 TCRBV21S2A2A0A5A6 115 aa4.67□□□□□ -1.66
CNN3-206ENST00000487539 ESYT2A0FGR8 921 aa4.67□□□□□ -1.66
CNN3-206ENST00000487539 CCDC78A2IDD5 438 aa4.67□□□□□ -1.66
CNN3-206ENST00000487539 TBX3O15119 743 aa4.67□□□□□ -1.66
CNN3-206ENST00000487539 KLK10O43240 276 aa4.67□□□□□ -1.66
CNN3-206ENST00000487539 AP5Z1O43299 807 aa4.67□□□□□ -1.66
CNN3-206ENST00000487539 TNFSF14O43557 240 aa4.67□□□□□ -1.66
CNN3-206ENST00000487539 CHMP2AO43633 222 aa4.67□□□□□ -1.66
CNN3-206ENST00000487539 PRAMEF10O60809 474 aa4.67□□□□□ -1.66
CNN3-206ENST00000487539 CHEK2O96017 543 aa4.67□□□□□ -1.66
CNN3-206ENST00000487539 ARF4P18085 180 aaPredicted RBP4.67□□□□□ -1.66
CNN3-206ENST00000487539 GABRG2P18507 467 aa4.67□□□□□ -1.66
CNN3-206ENST00000487539 GABRR2P28476 465 aa4.67□□□□□ -1.66
CNN3-206ENST00000487539 CD38P28907 300 aa4.67□□□□□ -1.66
CNN3-206ENST00000487539 PIK3CGP48736 1102 aa4.67□□□□□ -1.66
CNN3-206ENST00000487539 CLCNKBP51801 687 aa4.67□□□□□ -1.66
CNN3-206ENST00000487539 RPS7P62081 194 aaKnown RBP4.67□□□□□ -1.66
CNN3-206ENST00000487539 POU6F2P78424 691 aaPredicted RBP4.67□□□□□ -1.66
CNN3-206ENST00000487539 IL9RQ01113 521 aa4.67□□□□□ -1.66
CNN3-206ENST00000487539 MCL1Q07820 350 aa4.67□□□□□ -1.66
CNN3-206ENST00000487539 LAMTOR4Q0VGL1 99 aa4.67□□□□□ -1.66
CNN3-206ENST00000487539 MPP3Q13368 585 aa4.67□□□□□ -1.66
CNN3-206ENST00000487539 ERCC6LQ2NKX8 1250 aa4.67□□□□□ -1.66
CNN3-206ENST00000487539 MCMDC2Q4G0Z9 681 aa4.67□□□□□ -1.66
CNN3-206ENST00000487539 FBXO43Q4G163 708 aa4.67□□□□□ -1.66
CNN3-206ENST00000487539 FLYWCH1Q4VC44 716 aa4.67□□□□□ -1.66
CNN3-206ENST00000487539 KCNT1Q5JUK3 1230 aa4.67□□□□□ -1.66
CNN3-206ENST00000487539 GLRA4Q5JXX5 417 aa4.67□□□□□ -1.66
CNN3-206ENST00000487539 SPDYCQ5MJ68 293 aa4.67□□□□□ -1.66
CNN3-206ENST00000487539 HES3Q5TGS1 186 aa4.67□□□□□ -1.66
CNN3-206ENST00000487539 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.67□□□□□ -1.66
CNN3-206ENST00000487539 DNAJB7Q7Z6W7 309 aaPredicted RBP4.67□□□□□ -1.66
CNN3-206ENST00000487539 CATIPQ7Z7H3 387 aa4.67□□□□□ -1.66
CNN3-206ENST00000487539 RAB11FIP4Q86YS3 637 aa4.67□□□□□ -1.66
CNN3-206ENST00000487539 FTSJ3Q8IY81 847 aaKnown RBP4.67□□□□□ -1.66
CNN3-206ENST00000487539 ZCCHC9Q8N567 271 aaKnown RBP4.67□□□□□ -1.66
CNN3-206ENST00000487539 IL17RCQ8NAC3 791 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms