RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 PRR23D2P0DMB1 279 aaPredicted RBP4.24□□□□□ -1.73
LINC00888-204ENST00000487386 COX7A2P14406 83 aa4.24□□□□□ -1.73
LINC00888-204ENST00000487386 AGAP20933 346 aa4.24□□□□□ -1.73
LINC00888-204ENST00000487386 CHATP28329 748 aa4.24□□□□□ -1.73
LINC00888-204ENST00000487386 PIGAP37287 484 aa4.24□□□□□ -1.73
LINC00888-204ENST00000487386 GALNT2Q10471 571 aa4.24□□□□□ -1.73
LINC00888-204ENST00000487386 SETMARQ53H47 684 aaPredicted RBP4.24□□□□□ -1.73
LINC00888-204ENST00000487386 SGO1Q5FBB7 561 aa4.24□□□□□ -1.73
LINC00888-204ENST00000487386 SLC9C2Q5TAH2 1124 aa4.24□□□□□ -1.73
LINC00888-204ENST00000487386 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.24□□□□□ -1.73
LINC00888-204ENST00000487386 NOXA1Q86UR1 476 aa4.24□□□□□ -1.73
LINC00888-204ENST00000487386 PGBD5Q8N414 524 aa4.24□□□□□ -1.73
LINC00888-204ENST00000487386 NOC3LQ8WTT2 800 aaKnown RBP4.24□□□□□ -1.73
LINC00888-204ENST00000487386 HEMGNQ9BXL5 484 aa4.24□□□□□ -1.73
LINC00888-204ENST00000487386 GLIS2Q9BZE0 524 aaPredicted RBP4.24□□□□□ -1.73
LINC00888-204ENST00000487386 DDX31Q9H8H2 851 aaKnown RBP4.24□□□□□ -1.73
LINC00888-204ENST00000487386 C20orf141Q9NUB4 165 aa4.24□□□□□ -1.73
LINC00888-204ENST00000487386 PGAP2Q9UHJ9 254 aa4.24□□□□□ -1.73
LINC00888-204ENST00000487386 SLC13A4Q9UKG4 626 aa4.24□□□□□ -1.73
LINC00888-204ENST00000487386 PROCRQ9UNN8 238 aa4.24□□□□□ -1.73
LINC00888-204ENST00000487386 PAM16Q9Y3D7 125 aa4.24□□□□□ -1.73
LINC00888-204ENST00000487386 CECR2Q9BXF3 1484 aa4.24□□□□□ -1.73
LINC00888-204ENST00000487386 EIF4G1Q04637 1599 aaKnown RBP4.23□□□□□ -1.73
LINC00888-204ENST00000487386 TOP2AP11388 1531 aaKnown RBP4.23□□□□□ -1.73
LINC00888-204ENST00000487386 IGLV5-37A0A075B6J1 123 aa4.23□□□□□ -1.73
LINC00888-204ENST00000487386 IGHV4-30-4P0DP06 118 aa4.23□□□□□ -1.73
LINC00888-204ENST00000487386 GPTP24298 496 aa4.23□□□□□ -1.73
LINC00888-204ENST00000487386 GGT5P36269 586 aa4.23□□□□□ -1.73
LINC00888-204ENST00000487386 RGS19P49795 217 aa4.23□□□□□ -1.73
LINC00888-204ENST00000487386 TUBP50607 506 aa4.23□□□□□ -1.73
LINC00888-204ENST00000487386 HDAC4P56524 1084 aa4.23□□□□□ -1.73
LINC00888-204ENST00000487386 RPP30P78346 268 aaKnown RBP4.23□□□□□ -1.73
LINC00888-204ENST00000487386 PTP4A2Q12974 167 aa4.23□□□□□ -1.73
LINC00888-204ENST00000487386 GPR68Q15743 365 aa4.23□□□□□ -1.73
LINC00888-204ENST00000487386 KIF19Q2TAC6 998 aa4.23□□□□□ -1.73
LINC00888-204ENST00000487386 LRRC8EQ6NSJ5 796 aa4.23□□□□□ -1.73
LINC00888-204ENST00000487386 H1FNTQ75WM6 255 aaPredicted RBP4.23□□□□□ -1.73
LINC00888-204ENST00000487386 SHFQ7M4L6 423 aa4.23□□□□□ -1.73
LINC00888-204ENST00000487386 DHX40Q8IX18 779 aaKnown RBP4.23□□□□□ -1.73
LINC00888-204ENST00000487386 ERGIC1Q969X5 290 aa4.23□□□□□ -1.73
LINC00888-204ENST00000487386 ZC3HAV1LQ96H79 300 aaKnown RBP4.23□□□□□ -1.73
LINC00888-204ENST00000487386 MMTAG2Q9BU76 263 aaKnown RBP4.23□□□□□ -1.73
LINC00888-204ENST00000487386 KRTAP2-2Q9BYT5 123 aa4.23□□□□□ -1.73
LINC00888-204ENST00000487386 PLEKHA4Q9H4M7 779 aa4.23□□□□□ -1.73
LINC00888-204ENST00000487386 DDX4Q9NQI0 724 aaKnown RBP4.23□□□□□ -1.73
LINC00888-204ENST00000487386 CTNNAL1Q9UBT7 734 aa4.23□□□□□ -1.73
LINC00888-204ENST00000487386 CYP46A1Q9Y6A2 500 aa4.23□□□□□ -1.73
LINC00888-204ENST00000487386 NPIPB11E5RHQ5 1161 aa4.22□□□□□ -1.73
LINC00888-204ENST00000487386 IFNL4K9M1U5 179 aa4.22□□□□□ -1.73
LINC00888-204ENST00000487386 GAGE7O76087 117 aa4.22□□□□□ -1.73
LINC00888-204ENST00000487386 MTA2O94776 668 aa4.22□□□□□ -1.73
LINC00888-204ENST00000487386 MT-CYBP00156 380 aaPredicted RBP4.22□□□□□ -1.73
LINC00888-204ENST00000487386 GAGE12FP0CL80 117 aa4.22□□□□□ -1.73
LINC00888-204ENST00000487386 GAGE12GP0CL81 117 aa4.22□□□□□ -1.73
LINC00888-204ENST00000487386 GAGE12IP0CL82 117 aa4.22□□□□□ -1.73
LINC00888-204ENST00000487386 ETFAP13804 333 aa4.22□□□□□ -1.73
LINC00888-204ENST00000487386 SSTR2P30874 369 aa4.22□□□□□ -1.73
LINC00888-204ENST00000487386 GRIK3Q13003 919 aa4.22□□□□□ -1.73
LINC00888-204ENST00000487386 GAGE1Q13065 139 aa4.22□□□□□ -1.73
LINC00888-204ENST00000487386 GAGE4Q13068 117 aa4.22□□□□□ -1.73
LINC00888-204ENST00000487386 MYBPHQ13203 477 aa4.22□□□□□ -1.73
LINC00888-204ENST00000487386 DHX34Q14147 1143 aaKnown RBP4.22□□□□□ -1.73
LINC00888-204ENST00000487386 VEPH1Q14D04 833 aa4.22□□□□□ -1.73
LINC00888-204ENST00000487386 RNPS1Q15287 305 aaKnown RBP4.22□□□□□ -1.73
LINC00888-204ENST00000487386 EFNB3Q15768 340 aa4.22□□□□□ -1.73
LINC00888-204ENST00000487386 HIST2H2ACQ16777 129 aaPredicted RBP4.22□□□□□ -1.73
LINC00888-204ENST00000487386 SLC9B1Q4ZJI4 515 aa4.22□□□□□ -1.73
LINC00888-204ENST00000487386 XKR9Q5GH70 373 aa4.22□□□□□ -1.73
LINC00888-204ENST00000487386 PPP6R3Q5H9R7 873 aaPredicted RBP4.22□□□□□ -1.73
LINC00888-204ENST00000487386 CPLX2Q6PUV4 134 aaKnown RBP4.22□□□□□ -1.73
LINC00888-204ENST00000487386 EXOC8Q8IYI6 725 aa4.22□□□□□ -1.73
LINC00888-204ENST00000487386 ESX1Q8N693 406 aa4.22□□□□□ -1.73
LINC00888-204ENST00000487386 LILRB1Q8NHL6 650 aaPredicted RBP4.22□□□□□ -1.73
LINC00888-204ENST00000487386 FBXL8Q96CD0 374 aa4.22□□□□□ -1.73
LINC00888-204ENST00000487386 RNF125Q96EQ8 232 aa4.22□□□□□ -1.73
LINC00888-204ENST00000487386 SCMH1Q96GD3 660 aa4.22□□□□□ -1.73
LINC00888-204ENST00000487386 SIN3AQ96ST3 1273 aa4.22□□□□□ -1.73
LINC00888-204ENST00000487386 C1QTNF4Q9BXJ3 329 aa4.22□□□□□ -1.73
LINC00888-204ENST00000487386 NUF2Q9BZD4 464 aa4.22□□□□□ -1.73
LINC00888-204ENST00000487386 ZNF556Q9HAH1 456 aa4.22□□□□□ -1.73
LINC00888-204ENST00000487386 SLCO3A1Q9UIG8 710 aa4.22□□□□□ -1.73
LINC00888-204ENST00000487386 PCDHGB1Q9Y5G3 927 aa4.22□□□□□ -1.73
LINC00888-204ENST00000487386 NFS1Q9Y697 457 aa4.22□□□□□ -1.73
LINC00888-204ENST00000487386 TEX13CA0A0J9YWL9 993 aa4.21□□□□□ -1.74
LINC00888-204ENST00000487386 A0A1B0GVC2 190 aa4.21□□□□□ -1.74
LINC00888-204ENST00000487386 SMTNL1A8MU46 457 aa4.21□□□□□ -1.74
LINC00888-204ENST00000487386 LDLRAD4O15165 306 aa4.21□□□□□ -1.74
LINC00888-204ENST00000487386 TFP02787 698 aa4.21□□□□□ -1.74
LINC00888-204ENST00000487386 MMP2P08253 660 aa4.21□□□□□ -1.74
LINC00888-204ENST00000487386 DAOP14920 347 aa4.21□□□□□ -1.74
LINC00888-204ENST00000487386 POU1F1P28069 291 aa4.21□□□□□ -1.74
LINC00888-204ENST00000487386 HNRNPH1P31943 449 aaKnown RBP4.21□□□□□ -1.74
LINC00888-204ENST00000487386 SHMT1P34896 483 aa4.21□□□□□ -1.74
LINC00888-204ENST00000487386 ECT2LQ008S8 904 aa4.21□□□□□ -1.74
LINC00888-204ENST00000487386 DLG1Q12959 904 aa4.21□□□□□ -1.74
LINC00888-204ENST00000487386 COASYQ13057 564 aa4.21□□□□□ -1.74
LINC00888-204ENST00000487386 IZUMO4Q1ZYL8 232 aa4.21□□□□□ -1.74
LINC00888-204ENST00000487386 ANKRD54Q6NXT1 300 aa4.21□□□□□ -1.74
LINC00888-204ENST00000487386 SPSB3Q6PJ21 355 aa4.21□□□□□ -1.74
LINC00888-204ENST00000487386 RHBDF2Q6PJF5 856 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms