RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 PCDHA13Q9Y5I0 950 aa10.34□□□□□ -0.75
RNF220-215ENST00000487332 CSNK1G3Q9Y6M4 447 aa10.34□□□□□ -0.75
RNF220-215ENST00000487332 CACNA1EQ15878 2313 aa10.33□□□□□ -0.76
RNF220-215ENST00000487332 CEP250Q9BV73 2442 aa10.33□□□□□ -0.76
RNF220-215ENST00000487332 LRRD1A4D1F6 860 aa10.33□□□□□ -0.76
RNF220-215ENST00000487332 TMEM8BA6NDV4 472 aa10.33□□□□□ -0.76
RNF220-215ENST00000487332 TMEM110-MUSTN1A8MSY1 372 aa10.33□□□□□ -0.76
RNF220-215ENST00000487332 H3BM21 787 aa10.33□□□□□ -0.76
RNF220-215ENST00000487332 KCNK3O14649 394 aa10.33□□□□□ -0.76
RNF220-215ENST00000487332 PPP1R12AO14974 1030 aaPredicted RBP10.33□□□□□ -0.76
RNF220-215ENST00000487332 SPOPO43791 374 aa10.33□□□□□ -0.76
RNF220-215ENST00000487332 FZD6O60353 706 aa10.33□□□□□ -0.76
RNF220-215ENST00000487332 PIAS2O75928 621 aa10.33□□□□□ -0.76
RNF220-215ENST00000487332 CPP00450 1065 aa10.33□□□□□ -0.76
RNF220-215ENST00000487332 CSF2P04141 144 aa10.33□□□□□ -0.76
RNF220-215ENST00000487332 KRT1P04264 644 aa10.33□□□□□ -0.76
RNF220-215ENST00000487332 HOXC4P09017 264 aaPredicted RBP10.33□□□□□ -0.76
RNF220-215ENST00000487332 COMTP21964 271 aa10.33□□□□□ -0.76
RNF220-215ENST00000487332 CA4P22748 312 aa10.33□□□□□ -0.76
RNF220-215ENST00000487332 CLDN2P57739 230 aa10.33□□□□□ -0.76
RNF220-215ENST00000487332 RPL26P61254 145 aaKnown RBP10.33□□□□□ -0.76
RNF220-215ENST00000487332 IFI35P80217 286 aaPredicted RBP10.33□□□□□ -0.76
RNF220-215ENST00000487332 IL9RQ01113 521 aa10.33□□□□□ -0.76
RNF220-215ENST00000487332 GBE1Q04446 702 aa10.33□□□□□ -0.76
RNF220-215ENST00000487332 FOXC1Q12948 553 aa10.33□□□□□ -0.76
RNF220-215ENST00000487332 MTM1Q13496 603 aa10.33□□□□□ -0.76
RNF220-215ENST00000487332 FZD2Q14332 565 aa10.33□□□□□ -0.76
RNF220-215ENST00000487332 Q6ZSR6 202 aa10.33□□□□□ -0.76
RNF220-215ENST00000487332 CCDC13Q8IYE1 715 aa10.33□□□□□ -0.76
RNF220-215ENST00000487332 TXLNBQ8N3L3 684 aa10.33□□□□□ -0.76
RNF220-215ENST00000487332 NETO2Q8NC67 525 aa10.33□□□□□ -0.76
RNF220-215ENST00000487332 OR4C6Q8NH72 309 aa10.33□□□□□ -0.76
RNF220-215ENST00000487332 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.33□□□□□ -0.76
RNF220-215ENST00000487332 BTN2A2Q8WVV5 523 aa10.33□□□□□ -0.76
RNF220-215ENST00000487332 KLK6Q92876 244 aa10.33□□□□□ -0.76
RNF220-215ENST00000487332 MCCC1Q96RQ3 725 aaPredicted RBP10.33□□□□□ -0.76
RNF220-215ENST00000487332 MYOCQ99972 504 aa10.33□□□□□ -0.76
RNF220-215ENST00000487332 DUSP23Q9BVJ7 150 aa10.33□□□□□ -0.76
RNF220-215ENST00000487332 TMEM121BQ9BXQ6 578 aaPredicted RBP10.33□□□□□ -0.76
RNF220-215ENST00000487332 USP29Q9HBJ7 922 aa10.33□□□□□ -0.76
RNF220-215ENST00000487332 RPL26L1Q9UNX3 145 aaKnown RBP10.33□□□□□ -0.76
RNF220-215ENST00000487332 CA5BQ9Y2D0 317 aa10.33□□□□□ -0.76
RNF220-215ENST00000487332 MSRB2Q9Y3D2 182 aa10.33□□□□□ -0.76
RNF220-215ENST00000487332 EPN1Q9Y6I3 576 aaPredicted RBP10.33□□□□□ -0.76
RNF220-215ENST00000487332 TMEM131Q92545 1883 aa10.33□□□□□ -0.76
RNF220-215ENST00000487332 SOWAHDA6NJG2 315 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 ENC1O14682 589 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 APOL1O14791 398 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 PJA2O43164 708 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 MMP20O60882 483 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 PGLSO95336 258 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 ELFN1P0C7U0 828 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 ALPPL2P10696 532 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 CYP2A6P11509 494 aaPredicted RBP10.32□□□□□ -0.76
RNF220-215ENST00000487332 KRT10P13645 584 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 TGM2P21980 687 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 DGKAP23743 735 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 ACP1P24666 158 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 TEAD1P28347 426 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 VIPR1P32241 457 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 NR2C2P49116 596 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 LIG3P49916 1009 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 VAV2P52735 878 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 KIAA1024LP59773 190 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 TRAF2Q12933 501 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 ZNF211Q13398 564 aaPredicted RBP10.32□□□□□ -0.76
RNF220-215ENST00000487332 TFDP2Q14188 446 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 NUMA1Q14980 2115 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 LRRC14Q15048 493 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 IRF4Q15306 451 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 PPP2R5EQ16537 467 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 PROX2Q3B8N5 592 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 LRRC73Q5JTD7 316 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 ZFYVE27Q5T4F4 411 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 ARMC12Q5T9G4 340 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 ESRP1Q6NXG1 681 aaKnown RBP10.32□□□□□ -0.76
RNF220-215ENST00000487332 LIPIQ6XZB0 460 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 USP45Q70EL2 814 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 BZW1Q7L1Q6 419 aaKnown RBP10.32□□□□□ -0.76
RNF220-215ENST00000487332 GATAD2AQ86YP4 633 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 KATNAL2Q8IYT4 538 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 FAM181AQ8N9Y4 354 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 ATL2Q8NHH9 583 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 RBM41Q96IZ5 413 aaKnown RBP10.32□□□□□ -0.76
RNF220-215ENST00000487332 NSMCE3Q96MG7 304 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 LYSMD1Q96S90 227 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 IL12RB2Q99665 862 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 TDRD1Q9BXT4 1180 aaKnown RBP10.32□□□□□ -0.76
RNF220-215ENST00000487332 NOD2Q9HC29 1040 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 NT5MQ9NPB1 228 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 NLGN3Q9NZ94 848 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.32□□□□□ -0.76
RNF220-215ENST00000487332 ALG6Q9Y672 507 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 WDR87Q6ZQQ6 2873 aa10.32□□□□□ -0.76
RNF220-215ENST00000487332 NEMP2A6NFY4 417 aa10.31□□□□□ -0.76
RNF220-215ENST00000487332 TPP1O14773 563 aa10.31□□□□□ -0.76
RNF220-215ENST00000487332 SCAMP1O15126 338 aa10.31□□□□□ -0.76
RNF220-215ENST00000487332 RFPL3O75679 317 aa10.31□□□□□ -0.76
RNF220-215ENST00000487332 HEXIM1O94992 359 aaKnown RBP10.31□□□□□ -0.76
RNF220-215ENST00000487332 LDOC1O95751 146 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms