RNA–Protein interactions for RNA: ENST00000487305.5

TMEM39B-208, Transcript of transmembrane protein 39B, humanhuman

TSL 2

Gene TMEM39B, Length 2,087 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-208ENST00000487305 DENND6AQ8IWF6 608 aa12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 RTL3Q8N8U3 475 aaKnown RBP12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 TNIP2Q8NFZ5 429 aa12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 USP13Q92995 863 aaPredicted RBP12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 BIRC8Q96P09 236 aa12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 NPAS2Q99743 824 aa12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 SGIP1Q9BQI5 828 aa12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 ANKRD60Q9BZ19 345 aa12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 TRPV6Q9H1D0 765 aa12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 SMOC2Q9H3U7 446 aa12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 ATP13A1Q9HD20 1204 aa12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 PFDN4Q9NQP4 134 aa12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 RBM22Q9NW64 420 aaKnown RBP eCLIP12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 UBP1Q9NZI7 540 aa12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 SLC8A2Q9UPR5 921 aa12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 TRAF6Q9Y4K3 522 aa12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 NUP205Q92621 2012 aa12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 KANSL1LA0AUZ9 987 aa12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 TYW5A2RUC4 315 aaKnown RBP12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 A8MT66 165 aa12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 KCNU1A8MYU2 1149 aa12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 MRASO14807 208 aa12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 DYNC1LI2O43237 492 aaPredicted RBP12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 HOXC8P31273 242 aa12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 SERPINH1P50454 418 aaKnown RBP12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 INPP5AQ14642 412 aa12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 KCTD21Q4G0X4 260 aa12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 AGKQ53H12 422 aa12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 BTBD8Q5XKL5 378 aa12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 RAB44Q7Z6P3 723 aaPredicted RBP12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 DHFR2Q86XF0 187 aa12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 CAMK1DQ8IU85 385 aa12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 ERI1Q8IV48 349 aaKnown RBP12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 COLGALT2Q8IYK4 626 aa12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 CLYBLQ8N0X4 340 aa12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 NUP93Q8N1F7 819 aa12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 MFSD2AQ8NA29 543 aa12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 TERB1Q8NA31 727 aa12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 ARRDC4Q8NCT1 418 aa12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 B4GALNT2Q8NHY0 566 aa12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 ZFP28Q8NHY6 868 aa12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 TMEM40Q8WWA1 233 aa12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 NMD3Q96D46 503 aaKnown RBP12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 SENP6Q9GZR1 1112 aaPredicted RBP12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 MFSD1Q9H3U5 465 aa12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 GID8Q9NWU2 228 aa12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 G3BP2Q9UN86 482 aaKnown RBP12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 NEU3Q9UQ49 428 aa12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 VWA7Q9Y334 891 aa12.47□□□□□ -0.41
TMEM39B-208ENST00000487305 E7ENX8 843 aa12.46□□□□□ -0.41
TMEM39B-208ENST00000487305 GOLGA8TH3BQL2 631 aa12.46□□□□□ -0.41
TMEM39B-208ENST00000487305 KPNA6O60684 536 aa12.46□□□□□ -0.41
TMEM39B-208ENST00000487305 DDNO94850 711 aaPredicted RBP12.46□□□□□ -0.41
TMEM39B-208ENST00000487305 BMP10O95393 424 aa12.46□□□□□ -0.41
TMEM39B-208ENST00000487305 ALDH3B2P48448 385 aa12.46□□□□□ -0.41
TMEM39B-208ENST00000487305 MRPL19P49406 292 aaKnown RBP12.46□□□□□ -0.41
TMEM39B-208ENST00000487305 CDK9P50750 372 aaKnown RBP12.46□□□□□ -0.41
TMEM39B-208ENST00000487305 MTA1Q13330 715 aa12.46□□□□□ -0.41
TMEM39B-208ENST00000487305 SMAD1Q15797 465 aaKnown RBP12.46□□□□□ -0.41
TMEM39B-208ENST00000487305 FAM110CQ1W6H9 321 aa12.46□□□□□ -0.41
TMEM39B-208ENST00000487305 C6orf52Q5T4I8 152 aa12.46□□□□□ -0.41
TMEM39B-208ENST00000487305 IL23RQ5VWK5 629 aa12.46□□□□□ -0.41
TMEM39B-208ENST00000487305 KRT80Q6KB66 452 aa12.46□□□□□ -0.41
TMEM39B-208ENST00000487305 CNSTQ6PJW8 725 aa12.46□□□□□ -0.41
TMEM39B-208ENST00000487305 LARP4Q71RC2 724 aaKnown RBP eCLIP12.46□□□□□ -0.41
TMEM39B-208ENST00000487305 GPRIN1Q7Z2K8 1008 aa12.46□□□□□ -0.41
TMEM39B-208ENST00000487305 EFL1Q7Z2Z2 1120 aaKnown RBP12.46□□□□□ -0.41
TMEM39B-208ENST00000487305 CROCCP3Q8IVE0 287 aa12.46□□□□□ -0.41
TMEM39B-208ENST00000487305 TRIML2Q8N7C3 387 aa12.46□□□□□ -0.41
TMEM39B-208ENST00000487305 OR2T34Q8NGX1 318 aa12.46□□□□□ -0.41
TMEM39B-208ENST00000487305 OR2T3Q8NH03 318 aa12.46□□□□□ -0.41
TMEM39B-208ENST00000487305 LPGAT1Q92604 370 aa12.46□□□□□ -0.41
TMEM39B-208ENST00000487305 CELF6Q96J87 481 aaKnown RBP12.46□□□□□ -0.41
TMEM39B-208ENST00000487305 SLC45A3Q96JT2 553 aa12.46□□□□□ -0.41
TMEM39B-208ENST00000487305 RIMKLBQ9ULI2 386 aa12.46□□□□□ -0.41
TMEM39B-208ENST00000487305 GOLGB1Q14789 3259 aaKnown RBP12.46□□□□□ -0.41
TMEM39B-208ENST00000487305 CCDC160A6NGH7 325 aa12.46□□□□□ -0.42
TMEM39B-208ENST00000487305 JUNP05412 331 aaKnown RBP12.46□□□□□ -0.42
TMEM39B-208ENST00000487305 HSD17B1P14061 328 aa12.46□□□□□ -0.42
TMEM39B-208ENST00000487305 ATP6V0D1P61421 351 aa12.46□□□□□ -0.42
TMEM39B-208ENST00000487305 ESRRGP62508 458 aa12.46□□□□□ -0.42
TMEM39B-208ENST00000487305 CSHL1Q14406 222 aa12.46□□□□□ -0.42
TMEM39B-208ENST00000487305 MYLK3Q32MK0 819 aa12.46□□□□□ -0.42
TMEM39B-208ENST00000487305 HERC6Q8IVU3 1022 aa12.46□□□□□ -0.42
TMEM39B-208ENST00000487305 MFSD6LQ8IWD5 586 aa12.46□□□□□ -0.42
TMEM39B-208ENST00000487305 UMODL1-AS1Q8N2C9 162 aa12.46□□□□□ -0.42
TMEM39B-208ENST00000487305 GALNT4Q8N4A0 578 aa12.46□□□□□ -0.42
TMEM39B-208ENST00000487305 MINDY1Q8N5J2 469 aa12.46□□□□□ -0.42
TMEM39B-208ENST00000487305 SPATA22Q8NHS9 363 aa12.46□□□□□ -0.42
TMEM39B-208ENST00000487305 RHEBL1Q8TAI7 183 aa12.46□□□□□ -0.42
TMEM39B-208ENST00000487305 EDEM1Q92611 657 aa12.46□□□□□ -0.42
TMEM39B-208ENST00000487305 MYLPFQ96A32 169 aa12.46□□□□□ -0.42
TMEM39B-208ENST00000487305 RMND5BQ96G75 393 aaPredicted RBP12.46□□□□□ -0.42
TMEM39B-208ENST00000487305 MRGPRX2Q96LB1 330 aa12.46□□□□□ -0.42
TMEM39B-208ENST00000487305 PPP1R36Q96LQ0 422 aa12.46□□□□□ -0.42
TMEM39B-208ENST00000487305 TCF12Q99081 682 aa12.46□□□□□ -0.42
TMEM39B-208ENST00000487305 PARK7Q99497 189 aaKnown RBP12.46□□□□□ -0.42
TMEM39B-208ENST00000487305 CCT7Q99832 543 aa12.46□□□□□ -0.42
TMEM39B-208ENST00000487305 GRIP2Q9C0E4 1043 aa12.46□□□□□ -0.42
TMEM39B-208ENST00000487305 CLK4Q9HAZ1 481 aaKnown RBP12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms