RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 TDRD1Q9BXT4 1180 aaKnown RBP14.74□□□□□ -0.05
LIMS3-205ENST00000487150 SLC17A9Q9BYT1 436 aa14.74□□□□□ -0.05
LIMS3-205ENST00000487150 TMEM9BQ9NQ34 198 aa14.74□□□□□ -0.05
LIMS3-205ENST00000487150 CDV3Q9UKY7 258 aaKnown RBP14.74□□□□□ -0.05
LIMS3-205ENST00000487150 ZKSCAN5Q9Y2L8 839 aa14.74□□□□□ -0.05
LIMS3-205ENST00000487150 PCDHB9Q9Y5E1 797 aa14.74□□□□□ -0.05
LIMS3-205ENST00000487150 PCDHGC4Q9Y5F7 938 aa14.74□□□□□ -0.05
LIMS3-205ENST00000487150 FAM186AA6NE01 2351 aa14.74□□□□□ -0.05
LIMS3-205ENST00000487150 NYNRINQ9P2P1 1898 aaKnown RBP14.74□□□□□ -0.05
LIMS3-205ENST00000487150 RIF1Q5UIP0 2472 aaKnown RBP14.73□□□□□ -0.05
LIMS3-205ENST00000487150 SPAG17Q6Q759 2223 aa14.73□□□□□ -0.05
LIMS3-205ENST00000487150 EML5Q05BV3 1969 aa14.73□□□□□ -0.05
LIMS3-205ENST00000487150 GOLGA6CA6NDK9 693 aa14.73□□□□□ -0.05
LIMS3-205ENST00000487150 GOLGA6BA6NDN3 693 aa14.73□□□□□ -0.05
LIMS3-205ENST00000487150 A6NNZ2 444 aa14.73□□□□□ -0.05
LIMS3-205ENST00000487150 PSMD11O00231 422 aa14.73□□□□□ -0.05
LIMS3-205ENST00000487150 RIOK3O14730 519 aaKnown RBP14.73□□□□□ -0.05
LIMS3-205ENST00000487150 YKT6O15498 198 aa14.73□□□□□ -0.05
LIMS3-205ENST00000487150 OPHN1O60890 802 aa14.73□□□□□ -0.05
LIMS3-205ENST00000487150 ELFN1P0C7U0 828 aa14.73□□□□□ -0.05
LIMS3-205ENST00000487150 GOLGA6DP0CG33 693 aa14.73□□□□□ -0.05
LIMS3-205ENST00000487150 ENGP17813 658 aa14.73□□□□□ -0.05
LIMS3-205ENST00000487150 PTPN3P26045 913 aa14.73□□□□□ -0.05
LIMS3-205ENST00000487150 MAOBP27338 520 aa14.73□□□□□ -0.05
LIMS3-205ENST00000487150 CD38P28907 300 aa14.73□□□□□ -0.05
LIMS3-205ENST00000487150 ADCY2Q08462 1091 aa14.73□□□□□ -0.05
LIMS3-205ENST00000487150 TRAF2Q12933 501 aa14.73□□□□□ -0.05
LIMS3-205ENST00000487150 GRIK2Q13002 908 aa14.73□□□□□ -0.05
LIMS3-205ENST00000487150 KLF1Q13351 362 aaPredicted RBP14.73□□□□□ -0.05
LIMS3-205ENST00000487150 ARHGEF7Q14155 803 aa14.73□□□□□ -0.05
LIMS3-205ENST00000487150 SF3A2Q15428 464 aaKnown RBP14.73□□□□□ -0.05
LIMS3-205ENST00000487150 CCDC6Q16204 474 aa14.73□□□□□ -0.05
LIMS3-205ENST00000487150 CCDC70Q6NSX1 233 aa14.73□□□□□ -0.05
LIMS3-205ENST00000487150 DARS2Q6PI48 645 aaKnown RBP14.73□□□□□ -0.05
LIMS3-205ENST00000487150 DPPA4Q7L190 304 aa14.73□□□□□ -0.05
LIMS3-205ENST00000487150 DCP2Q8IU60 420 aaKnown RBP14.73□□□□□ -0.05
LIMS3-205ENST00000487150 TMEM145Q8NBT3 493 aa14.73□□□□□ -0.05
LIMS3-205ENST00000487150 ARRDC2Q8TBH0 407 aa14.73□□□□□ -0.05
LIMS3-205ENST00000487150 IMP4Q96G21 291 aaKnown RBP14.73□□□□□ -0.05
LIMS3-205ENST00000487150 SLC6A18Q96N87 628 aa14.73□□□□□ -0.05
LIMS3-205ENST00000487150 NAP1L3Q99457 506 aaPredicted RBP14.73□□□□□ -0.05
LIMS3-205ENST00000487150 ORAI3Q9BRQ5 295 aa14.73□□□□□ -0.05
LIMS3-205ENST00000487150 C1QTNF2Q9BXJ5 285 aa14.73□□□□□ -0.05
LIMS3-205ENST00000487150 GLOD4Q9HC38 313 aa14.73□□□□□ -0.05
LIMS3-205ENST00000487150 GDF3Q9NR23 364 aa14.73□□□□□ -0.05
LIMS3-205ENST00000487150 HOMER3Q9NSC5 361 aa14.73□□□□□ -0.05
LIMS3-205ENST00000487150 GOLGA6AQ9NYA3 693 aa14.73□□□□□ -0.05
LIMS3-205ENST00000487150 EP300Q09472 2414 aaPredicted RBP14.72□□□□□ -0.05
LIMS3-205ENST00000487150 GVINP1Q7Z2Y8 2422 aa14.72□□□□□ -0.05
LIMS3-205ENST00000487150 FPGTO14772 594 aa14.72□□□□□ -0.05
LIMS3-205ENST00000487150 SLC31A1O15431 190 aa14.72□□□□□ -0.05
LIMS3-205ENST00000487150 ANXA9O76027 345 aa14.72□□□□□ -0.05
LIMS3-205ENST00000487150 ZNF30P17039 623 aa14.72□□□□□ -0.05
LIMS3-205ENST00000487150 VIPR1P32241 457 aa14.72□□□□□ -0.05
LIMS3-205ENST00000487150 CD86P42081 329 aa14.72□□□□□ -0.05
LIMS3-205ENST00000487150 FAM193AP78312 1265 aa14.72□□□□□ -0.05
LIMS3-205ENST00000487150 IRX4P78413 519 aa14.72□□□□□ -0.05
LIMS3-205ENST00000487150 PRPSAP1Q14558 356 aa14.72□□□□□ -0.05
LIMS3-205ENST00000487150 SEL1L3Q68CR1 1132 aa14.72□□□□□ -0.05
LIMS3-205ENST00000487150 KYAT3Q6YP21 454 aaKnown RBP14.72□□□□□ -0.05
LIMS3-205ENST00000487150 PID1Q7Z2X4 250 aa14.72□□□□□ -0.05
LIMS3-205ENST00000487150 SLC13A5Q86YT5 568 aaPredicted RBP14.72□□□□□ -0.05
LIMS3-205ENST00000487150 RAVER1Q8IY67 606 aaKnown RBP14.72□□□□□ -0.05
LIMS3-205ENST00000487150 CNTD1Q8N815 330 aa14.72□□□□□ -0.05
LIMS3-205ENST00000487150 IFT43Q96FT9 208 aa14.72□□□□□ -0.05
LIMS3-205ENST00000487150 SCRN2Q96FV2 425 aa14.72□□□□□ -0.05
LIMS3-205ENST00000487150 MCCC1Q96RQ3 725 aaPredicted RBP14.72□□□□□ -0.05
LIMS3-205ENST00000487150 GBA3Q9H227 469 aa14.72□□□□□ -0.05
LIMS3-205ENST00000487150 PCDH9Q9HC56 1237 aa14.72□□□□□ -0.05
LIMS3-205ENST00000487150 FAM153AQ9UHL3 310 aa14.72□□□□□ -0.05
LIMS3-205ENST00000487150 RSPH14Q9UHP6 348 aa14.72□□□□□ -0.05
LIMS3-205ENST00000487150 ZFR2Q9UPR6 939 aaKnown RBP14.72□□□□□ -0.05
LIMS3-205ENST00000487150 ITM2BQ9Y287 266 aa14.72□□□□□ -0.05
LIMS3-205ENST00000487150 PPIL1Q9Y3C6 166 aa14.72□□□□□ -0.05
LIMS3-205ENST00000487150 HS3ST3A1Q9Y663 406 aa14.72□□□□□ -0.05
LIMS3-205ENST00000487150 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.72□□□□□ -0.05
LIMS3-205ENST00000487150 IGLON5A6NGN9 336 aa14.71□□□□□ -0.05
LIMS3-205ENST00000487150 CAPN8A6NHC0 703 aa14.71□□□□□ -0.05
LIMS3-205ENST00000487150 PATE3B3GLJ2 98 aa14.71□□□□□ -0.05
LIMS3-205ENST00000487150 KCNN4O15554 427 aa14.71□□□□□ -0.05
LIMS3-205ENST00000487150 SPINT1O43278 529 aa14.71□□□□□ -0.05
LIMS3-205ENST00000487150 LZTS3O60299 673 aaPredicted RBP14.71□□□□□ -0.05
LIMS3-205ENST00000487150 FZD6O60353 706 aa14.71□□□□□ -0.05
LIMS3-205ENST00000487150 C6P13671 934 aa14.71□□□□□ -0.05
LIMS3-205ENST00000487150 PRLRP16471 622 aa14.71□□□□□ -0.05
LIMS3-205ENST00000487150 ACTN2P35609 894 aa14.71□□□□□ -0.05
LIMS3-205ENST00000487150 RABIFP47224 123 aa14.71□□□□□ -0.05
LIMS3-205ENST00000487150 SKOR1P84550 965 aa14.71□□□□□ -0.05
LIMS3-205ENST00000487150 WASHC5Q12768 1159 aa14.71□□□□□ -0.05
LIMS3-205ENST00000487150 SLC14A1Q13336 389 aa14.71□□□□□ -0.05
LIMS3-205ENST00000487150 AGERQ15109 404 aa14.71□□□□□ -0.05
LIMS3-205ENST00000487150 P3H1Q32P28 736 aa14.71□□□□□ -0.05
LIMS3-205ENST00000487150 INAVAQ3KP66 663 aa14.71□□□□□ -0.05
LIMS3-205ENST00000487150 TCEAL6Q6IPX3 200 aa14.71□□□□□ -0.05
LIMS3-205ENST00000487150 TCEAL3Q969E4 200 aa14.71□□□□□ -0.05
LIMS3-205ENST00000487150 PBKQ96KB5 322 aa14.71□□□□□ -0.05
LIMS3-205ENST00000487150 SPATA13Q96N96 652 aa14.71□□□□□ -0.05
LIMS3-205ENST00000487150 FCRL5Q96RD9 977 aa14.71□□□□□ -0.05
LIMS3-205ENST00000487150 WRAP53Q9BUR4 548 aaKnown RBP14.71□□□□□ -0.05
LIMS3-205ENST00000487150 GTPBP2Q9BX10 602 aaKnown RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms