RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	PRAMEF14	Q5SWL7	426 aa		13.23	□□□□□ -0.29
NR1H3-223	ENST00000486991	TIGD7	Q6NT04	549 aa	Predicted RBP	13.23	□□□□□ -0.29
NR1H3-223	ENST00000486991	RETSAT	Q6NUM9	610 aa		13.23	□□□□□ -0.29
NR1H3-223	ENST00000486991	DBX2	Q6ZNG2	339 aa		13.23	□□□□□ -0.29
NR1H3-223	ENST00000486991	PDZD3	Q86UT5	571 aa		13.23	□□□□□ -0.29
NR1H3-223	ENST00000486991	MMAA	Q8IVH4	418 aa	Known RBP	13.23	□□□□□ -0.29
NR1H3-223	ENST00000486991	KLHL7	Q8IXQ5	586 aa		13.23	□□□□□ -0.29
NR1H3-223	ENST00000486991	SH2D3C	Q8N5H7	860 aa		13.23	□□□□□ -0.29
NR1H3-223	ENST00000486991	AADAT	Q8N5Z0	425 aa		13.23	□□□□□ -0.29
NR1H3-223	ENST00000486991	MNS1	Q8NEH6	495 aa		13.23	□□□□□ -0.29
NR1H3-223	ENST00000486991	SPATA4	Q8NEY3	305 aa		13.23	□□□□□ -0.29
NR1H3-223	ENST00000486991	BIRC7	Q96CA5	298 aa		13.23	□□□□□ -0.29
NR1H3-223	ENST00000486991	CCDC114	Q96M63	670 aa		13.23	□□□□□ -0.29
NR1H3-223	ENST00000486991	TSGA13	Q96PP4	275 aa		13.23	□□□□□ -0.29
NR1H3-223	ENST00000486991	FERMT1	Q9BQL6	677 aa		13.23	□□□□□ -0.29
NR1H3-223	ENST00000486991	CARD6	Q9BX69	1037 aa		13.23	□□□□□ -0.29
NR1H3-223	ENST00000486991	UBA2	Q9UBT2	640 aa	Predicted RBP	13.23	□□□□□ -0.29
NR1H3-223	ENST00000486991	SARDH	Q9UL12	918 aa		13.23	□□□□□ -0.29
NR1H3-223	ENST00000486991	ANKRD6	Q9Y2G4	727 aa		13.23	□□□□□ -0.29
NR1H3-223	ENST00000486991	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	13.23	□□□□□ -0.29
NR1H3-223	ENST00000486991	ACTL7A	Q9Y615	435 aa		13.23	□□□□□ -0.29
NR1H3-223	ENST00000486991	ANKRD36	A6QL64	1941 aa		13.23	□□□□□ -0.29
NR1H3-223	ENST00000486991	FASN	P49327	2511 aa	Known RBP	13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	CTAGE15	A4D2H0	777 aa		13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991		H0Y8X5	98 aa		13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	CCDC188	H7C350	402 aa		13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991		K7ERQ8	282 aa		13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	KCNK1	O00180	336 aa		13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	RNF103	O00237	685 aa		13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	MATN3	O15232	486 aa		13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	KCNN4	O15554	427 aa		13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	SMAD6	O43541	496 aa	Known RBP	13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	ZNF821	O75541	412 aa	Predicted RBP	13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	NEBL	O76041	1014 aa		13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	SEMA4F	O95754	770 aa		13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	CD160	O95971	181 aa		13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	IGHV4-34	P06331	123 aa		13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	ZNF883	P0CG24	379 aa		13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	CTAGE8	P0CG41	777 aa		13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	CHRNA3	P32297	505 aa		13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	DRD3	P35462	400 aa		13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	COIL	P38432	576 aa	Predicted RBP	13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	CLCN6	P51797	869 aa		13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	ARF5	P84085	180 aa		13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	CYP4F3	Q08477	520 aa		13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	ELAVL3	Q14576	367 aa	Known RBP	13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	OASL	Q15646	514 aa	Known RBP	13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	CYP1B1	Q16678	543 aa		13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	TMCO4	Q5TGY1	634 aa		13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	TTC27	Q6P3X3	843 aa		13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	CCDC137	Q6PK04	289 aa	Known RBP	13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991		Q6ZVU0	165 aa		13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	GSTA5	Q7RTV2	222 aa		13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	TMPRSS7	Q7RTY8	843 aa		13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	ZNF572	Q7Z3I7	529 aa	Predicted RBP	13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	CTAGE6	Q86UF2	777 aa		13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	CTAGE4	Q8IX94	777 aa		13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	CEP112	Q8N8E3	955 aa		13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	HTR3C	Q8WXA8	447 aa		13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	VOPP1	Q96AW1	172 aa		13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	SKA1	Q96BD8	255 aa		13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	CRELD1	Q96HD1	420 aa		13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	OMD	Q99983	421 aa		13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	TMEM121	Q9BTD3	319 aa		13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	CEP41	Q9BYV8	373 aa		13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	DDX47	Q9H0S4	455 aa	Known RBP	13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	PDF	Q9HBH1	243 aa		13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	RRAGD	Q9NQL2	400 aa	Predicted RBP	13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	FBXL12	Q9NXK8	326 aa		13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	GCN1	Q92616	2671 aa	Known RBP	13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991	LRRK1	Q38SD2	2015 aa		13.22	□□□□□ -0.29
NR1H3-223	ENST00000486991		A0A1W2PP55	124 aa		13.21	□□□□□ -0.29
NR1H3-223	ENST00000486991	CFAP69	A5D8W1	941 aa		13.21	□□□□□ -0.29
NR1H3-223	ENST00000486991	TRABD2B	A6NFA1	517 aa		13.21	□□□□□ -0.29
NR1H3-223	ENST00000486991	FAM47DP	A6NHR8	397 aa		13.21	□□□□□ -0.29
NR1H3-223	ENST00000486991	LRRC72	A6NJI9	287 aa		13.21	□□□□□ -0.29
NR1H3-223	ENST00000486991	MTSS1	O43312	755 aa		13.21	□□□□□ -0.29
NR1H3-223	ENST00000486991	STK10	O94804	968 aa	Known RBP	13.21	□□□□□ -0.29
NR1H3-223	ENST00000486991	ADH1B	P00325	375 aa		13.21	□□□□□ -0.29
NR1H3-223	ENST00000486991	JCHAIN	P01591	159 aa		13.21	□□□□□ -0.29
NR1H3-223	ENST00000486991	ITGAV	P06756	1048 aa		13.21	□□□□□ -0.29
NR1H3-223	ENST00000486991	CTSL	P07711	333 aa		13.21	□□□□□ -0.29
NR1H3-223	ENST00000486991	CCNB1	P14635	433 aa		13.21	□□□□□ -0.29
NR1H3-223	ENST00000486991	C5AR1	P21730	350 aa		13.21	□□□□□ -0.29
NR1H3-223	ENST00000486991	SLC8A1	P32418	973 aa		13.21	□□□□□ -0.29
NR1H3-223	ENST00000486991	PSMD8	P48556	350 aa		13.21	□□□□□ -0.29
NR1H3-223	ENST00000486991	FNTA	P49354	379 aa		13.21	□□□□□ -0.29
NR1H3-223	ENST00000486991	AFF3	P51826	1226 aa	Known RBP	13.21	□□□□□ -0.29
NR1H3-223	ENST00000486991	GEMIN4	P57678	1058 aa	Known RBP	13.21	□□□□□ -0.29
NR1H3-223	ENST00000486991	SLC20A2	Q08357	652 aa		13.21	□□□□□ -0.29
NR1H3-223	ENST00000486991	CCDC15	Q0P6D6	951 aa		13.21	□□□□□ -0.29
NR1H3-223	ENST00000486991	LBR	Q14739	615 aa	Known RBP	13.21	□□□□□ -0.29
NR1H3-223	ENST00000486991	DLG2	Q15700	870 aa		13.21	□□□□□ -0.29
NR1H3-223	ENST00000486991	ACCSL	Q4AC99	568 aa		13.21	□□□□□ -0.29
NR1H3-223	ENST00000486991	FAM182A	Q5T1J6	154 aa		13.21	□□□□□ -0.29
NR1H3-223	ENST00000486991	MARC1	Q5VT66	337 aa		13.21	□□□□□ -0.29
NR1H3-223	ENST00000486991	FAM46C	Q5VWP2	391 aa		13.21	□□□□□ -0.29
NR1H3-223	ENST00000486991	DRICH1	Q6PGQ1	229 aa	Predicted RBP	13.21	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms