RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 TPCN2Q8NHX9 752 aa22.6■■□□□ 1.21
SREBF1-214ENST00000486311 CLPBQ9H078 707 aa22.6■■□□□ 1.21
SREBF1-214ENST00000486311 CNOT8Q9UFF9 292 aaKnown RBP22.6■■□□□ 1.21
SREBF1-214ENST00000486311 ATP8A1Q9Y2Q0 1164 aa22.6■■□□□ 1.21
SREBF1-214ENST00000486311 DDX3XO00571 662 aaKnown RBP eCLIP22.59■■□□□ 1.21
SREBF1-214ENST00000486311 YY2O15391 372 aa22.59■■□□□ 1.21
SREBF1-214ENST00000486311 MMP12P39900 470 aa22.59■■□□□ 1.21
SREBF1-214ENST00000486311 LIG3P49916 1009 aa22.59■■□□□ 1.21
SREBF1-214ENST00000486311 BLKP51451 505 aa22.59■■□□□ 1.21
SREBF1-214ENST00000486311 ZNF135P52742 658 aaPredicted RBP22.59■■□□□ 1.21
SREBF1-214ENST00000486311 GABREP78334 506 aa22.59■■□□□ 1.21
SREBF1-214ENST00000486311 RFTN1Q14699 578 aaPredicted RBP22.59■■□□□ 1.21
SREBF1-214ENST00000486311 SLC35F3Q8IY50 421 aa22.59■■□□□ 1.21
SREBF1-214ENST00000486311 FSTL5Q8N475 847 aaPredicted RBP22.59■■□□□ 1.21
SREBF1-214ENST00000486311 GRAMD1AQ96CP6 724 aa22.59■■□□□ 1.21
SREBF1-214ENST00000486311 ATP13A3Q9H7F0 1226 aa22.59■■□□□ 1.21
SREBF1-214ENST00000486311 POLR1BQ9H9Y6 1135 aa22.59■■□□□ 1.21
SREBF1-214ENST00000486311 RAI2Q9Y5P3 530 aa22.59■■□□□ 1.21
SREBF1-214ENST00000486311 SCINQ9Y6U3 715 aa22.59■■□□□ 1.21
SREBF1-214ENST00000486311 TDRD6O60522 2096 aaKnown RBP22.58■■□□□ 1.21
SREBF1-214ENST00000486311 A0A1B0GTH6 734 aa22.58■■□□□ 1.21
SREBF1-214ENST00000486311 CFAP69A5D8W1 941 aa22.58■■□□□ 1.21
SREBF1-214ENST00000486311 MUSKO15146 869 aa22.58■■□□□ 1.21
SREBF1-214ENST00000486311 LRCH4O75427 683 aa22.58■■□□□ 1.21
SREBF1-214ENST00000486311 SERPINA4P29622 427 aa22.58■■□□□ 1.21
SREBF1-214ENST00000486311 HCAR3P49019 387 aa22.58■■□□□ 1.21
SREBF1-214ENST00000486311 HK3P52790 923 aa22.58■■□□□ 1.21
SREBF1-214ENST00000486311 NSUN2Q08J23 767 aaKnown RBP eCLIP22.58■■□□□ 1.21
SREBF1-214ENST00000486311 NFATC4Q14934 902 aa22.58■■□□□ 1.21
SREBF1-214ENST00000486311 PPP6R3Q5H9R7 873 aaPredicted RBP22.58■■□□□ 1.21
SREBF1-214ENST00000486311 NPWQ8N729 165 aa22.58■■□□□ 1.21
SREBF1-214ENST00000486311 NAT6Q93015 286 aa22.58■■□□□ 1.21
SREBF1-214ENST00000486311 ZNF653Q96CK0 615 aa22.58■■□□□ 1.21
SREBF1-214ENST00000486311 ECHDC3Q96DC8 303 aa22.58■■□□□ 1.21
SREBF1-214ENST00000486311 HIC2Q96JB3 615 aa22.58■■□□□ 1.21
SREBF1-214ENST00000486311 NAP1L5Q96NT1 182 aaPredicted RBP22.58■■□□□ 1.21
SREBF1-214ENST00000486311 CINPQ9BW66 212 aaPredicted RBP22.58■■□□□ 1.21
SREBF1-214ENST00000486311 EDEM3Q9BZQ6 932 aa22.58■■□□□ 1.21
SREBF1-214ENST00000486311 SP110Q9HB58 689 aa22.58■■□□□ 1.21
SREBF1-214ENST00000486311 DFFAO00273 331 aa22.57■■□□□ 1.2
SREBF1-214ENST00000486311 TCEA3O75764 348 aa22.57■■□□□ 1.2
SREBF1-214ENST00000486311 PRKCGP05129 697 aa22.57■■□□□ 1.2
SREBF1-214ENST00000486311 CELA2BP08218 269 aaPredicted RBP22.57■■□□□ 1.2
SREBF1-214ENST00000486311 HTR1BP28222 390 aa22.57■■□□□ 1.2
SREBF1-214ENST00000486311 TLE3Q04726 772 aa22.57■■□□□ 1.2
SREBF1-214ENST00000486311 IL10RBQ08334 325 aa22.57■■□□□ 1.2
SREBF1-214ENST00000486311 KLHL30Q0D2K2 578 aa22.57■■□□□ 1.2
SREBF1-214ENST00000486311 CCDC173Q0VFZ6 552 aa22.57■■□□□ 1.2
SREBF1-214ENST00000486311 DPYSQ14117 519 aa22.57■■□□□ 1.2
SREBF1-214ENST00000486311 INPP5AQ14642 412 aa22.57■■□□□ 1.2
SREBF1-214ENST00000486311 ELOCQ15369 112 aa22.57■■□□□ 1.2
SREBF1-214ENST00000486311 ALG11Q2TAA5 492 aa22.57■■□□□ 1.2
SREBF1-214ENST00000486311 PERM1Q5SV97 790 aa22.57■■□□□ 1.2
SREBF1-214ENST00000486311 ARHGAP36Q6ZRI8 547 aa22.57■■□□□ 1.2
SREBF1-214ENST00000486311 SPACA3Q8IXA5 215 aa22.57■■□□□ 1.2
SREBF1-214ENST00000486311 ZNF248Q8NDW4 579 aa22.57■■□□□ 1.2
SREBF1-214ENST00000486311 TRIM11Q96F44 468 aa22.57■■□□□ 1.2
SREBF1-214ENST00000486311 UBL7Q96S82 380 aaPredicted RBP22.57■■□□□ 1.2
SREBF1-214ENST00000486311 APOOQ9BUR5 198 aa22.57■■□□□ 1.2
SREBF1-214ENST00000486311 CWC15Q9P013 229 aaKnown RBP22.57■■□□□ 1.2
SREBF1-214ENST00000486311 SHROOM3Q8TF72 1996 aa22.57■■□□□ 1.2
SREBF1-214ENST00000486311 RASGRP1O95267 797 aa22.56■■□□□ 1.2
SREBF1-214ENST00000486311 MYBL1P10243 752 aa22.56■■□□□ 1.2
SREBF1-214ENST00000486311 PCK1P35558 622 aa22.56■■□□□ 1.2
SREBF1-214ENST00000486311 ZNF165P49910 485 aa22.56■■□□□ 1.2
SREBF1-214ENST00000486311 PCBP4P57723 403 aaKnown RBP22.56■■□□□ 1.2
SREBF1-214ENST00000486311 ERVPABLB-1P60509 514 aa22.56■■□□□ 1.2
SREBF1-214ENST00000486311 BCL2L1Q07817 233 aa22.56■■□□□ 1.2
SREBF1-214ENST00000486311 MTM1Q13496 603 aa22.56■■□□□ 1.2
SREBF1-214ENST00000486311 ESRP1Q6NXG1 681 aaKnown RBP22.56■■□□□ 1.2
SREBF1-214ENST00000486311 LVRNQ6Q4G3 990 aa22.56■■□□□ 1.2
SREBF1-214ENST00000486311 IGF2-ASQ6U949 168 aa22.56■■□□□ 1.2
SREBF1-214ENST00000486311 CRTC1Q6UUV9 634 aa22.56■■□□□ 1.2
SREBF1-214ENST00000486311 RBM44Q6ZP01 1051 aaKnown RBP22.56■■□□□ 1.2
SREBF1-214ENST00000486311 HID1Q8IV36 788 aa22.56■■□□□ 1.2
SREBF1-214ENST00000486311 LZTR1Q8N653 840 aa22.56■■□□□ 1.2
SREBF1-214ENST00000486311 ATL2Q8NHH9 583 aa22.56■■□□□ 1.2
SREBF1-214ENST00000486311 WDR48Q8TAF3 677 aa22.56■■□□□ 1.2
SREBF1-214ENST00000486311 TSACCQ96A04 125 aaPredicted RBP22.56■■□□□ 1.2
SREBF1-214ENST00000486311 MRPL47Q9HD33 250 aaKnown RBP22.56■■□□□ 1.2
SREBF1-214ENST00000486311 PADI4Q9UM07 663 aa22.56■■□□□ 1.2
SREBF1-214ENST00000486311 OR1A2Q9Y585 309 aa22.56■■□□□ 1.2
SREBF1-214ENST00000486311 PTPRQQ9UMZ3 2332 aa22.56■■□□□ 1.2
SREBF1-214ENST00000486311 ALPIP09923 528 aa22.55■■□□□ 1.2
SREBF1-214ENST00000486311 RALGDSQ12967 914 aa22.55■■□□□ 1.2
SREBF1-214ENST00000486311 ENPP7Q6UWV6 458 aa22.55■■□□□ 1.2
SREBF1-214ENST00000486311 SDR16C5Q8N3Y7 309 aa22.55■■□□□ 1.2
SREBF1-214ENST00000486311 ARL10Q8N8L6 244 aa22.55■■□□□ 1.2
SREBF1-214ENST00000486311 SCG3Q8WXD2 468 aaKnown RBP22.55■■□□□ 1.2
SREBF1-214ENST00000486311 ATXN7L3BQ96GX2 97 aa22.55■■□□□ 1.2
SREBF1-214ENST00000486311 ZNF599Q96NL3 588 aa22.55■■□□□ 1.2
SREBF1-214ENST00000486311 FCRL3Q96P31 734 aaPredicted RBP22.55■■□□□ 1.2
SREBF1-214ENST00000486311 PSKH2Q96QS6 385 aa22.55■■□□□ 1.2
SREBF1-214ENST00000486311 LGMNQ99538 433 aa22.55■■□□□ 1.2
SREBF1-214ENST00000486311 ISCUQ9H1K1 167 aa22.55■■□□□ 1.2
SREBF1-214ENST00000486311 ZWILCHQ9H900 591 aa22.55■■□□□ 1.2
SREBF1-214ENST00000486311 ASCL3Q9NQ33 180 aa22.55■■□□□ 1.2
SREBF1-214ENST00000486311 SEPT3Q9UH03 358 aa22.55■■□□□ 1.2
SREBF1-214ENST00000486311 DOLKQ9UPQ8 538 aa22.55■■□□□ 1.2
SREBF1-214ENST00000486311 ENTPD2Q9Y5L3 495 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms