RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 GOLGA8TH3BQL2 631 aa12.02□□□□□ -0.49
PKP4-213ENST00000486254 LRG1P02750 347 aa12.02□□□□□ -0.49
PKP4-213ENST00000486254 HDCP19113 662 aa12.02□□□□□ -0.49
PKP4-213ENST00000486254 CD9P21926 228 aa12.02□□□□□ -0.49
PKP4-213ENST00000486254 PTPN4P29074 926 aa12.02□□□□□ -0.49
PKP4-213ENST00000486254 SERPINB3P29508 390 aa12.02□□□□□ -0.49
PKP4-213ENST00000486254 HOXA9P31269 272 aa12.02□□□□□ -0.49
PKP4-213ENST00000486254 SGSHP51688 502 aa12.02□□□□□ -0.49
PKP4-213ENST00000486254 TAS2R39P59534 338 aa12.02□□□□□ -0.49
PKP4-213ENST00000486254 ELF3P78545 371 aaPredicted RBP12.02□□□□□ -0.49
PKP4-213ENST00000486254 ARF5P84085 180 aa12.02□□□□□ -0.49
PKP4-213ENST00000486254 IRF9Q00978 393 aa12.02□□□□□ -0.49
PKP4-213ENST00000486254 UBE3AQ05086 875 aa12.02□□□□□ -0.49
PKP4-213ENST00000486254 ZBTB16Q05516 673 aa12.02□□□□□ -0.49
PKP4-213ENST00000486254 SF3A3Q12874 501 aaKnown RBP eCLIP12.02□□□□□ -0.49
PKP4-213ENST00000486254 ITGA9Q13797 1035 aa12.02□□□□□ -0.49
PKP4-213ENST00000486254 CYTH1Q15438 398 aa12.02□□□□□ -0.49
PKP4-213ENST00000486254 FAM83EQ2M2I3 478 aa12.02□□□□□ -0.49
PKP4-213ENST00000486254 AGAP9Q5VTM2 703 aa12.02□□□□□ -0.49
PKP4-213ENST00000486254 RNF219Q5W0B1 726 aaPredicted RBP12.02□□□□□ -0.49
PKP4-213ENST00000486254 LRRC8EQ6NSJ5 796 aa12.02□□□□□ -0.49
PKP4-213ENST00000486254 PSRC1Q6PGN9 363 aaPredicted RBP12.02□□□□□ -0.49
PKP4-213ENST00000486254 GAREM2Q75VX8 874 aa12.02□□□□□ -0.49
PKP4-213ENST00000486254 ELMOD1Q8N336 334 aa12.02□□□□□ -0.49
PKP4-213ENST00000486254 ACVR1CQ8NER5 493 aa12.02□□□□□ -0.49
PKP4-213ENST00000486254 TTC8Q8TAM2 541 aa12.02□□□□□ -0.49
PKP4-213ENST00000486254 PHOSPHO2Q8TCD6 241 aa12.02□□□□□ -0.49
PKP4-213ENST00000486254 SLC7A6OSQ96CW6 309 aaPredicted RBP12.02□□□□□ -0.49
PKP4-213ENST00000486254 PTCD3Q96EY7 689 aaKnown RBP12.02□□□□□ -0.49
PKP4-213ENST00000486254 ALG14Q96F25 216 aa12.02□□□□□ -0.49
PKP4-213ENST00000486254 ATXN7L3BQ96GX2 97 aa12.02□□□□□ -0.49
PKP4-213ENST00000486254 UBXN10Q96LJ8 280 aa12.02□□□□□ -0.49
PKP4-213ENST00000486254 GCNAQ96QF7 691 aa12.02□□□□□ -0.49
PKP4-213ENST00000486254 OMDQ99983 421 aa12.02□□□□□ -0.49
PKP4-213ENST00000486254 FEM1AQ9BSK4 669 aa12.02□□□□□ -0.49
PKP4-213ENST00000486254 C2orf49Q9BVC5 232 aaPredicted RBP12.02□□□□□ -0.49
PKP4-213ENST00000486254 EMILIN2Q9BXX0 1053 aa12.02□□□□□ -0.49
PKP4-213ENST00000486254 ADGRE3Q9BY15 652 aa12.02□□□□□ -0.49
PKP4-213ENST00000486254 C20orf27Q9GZN8 174 aa12.02□□□□□ -0.49
PKP4-213ENST00000486254 DRC3Q9H069 523 aa12.02□□□□□ -0.49
PKP4-213ENST00000486254 TASP1Q9H6P5 420 aa12.02□□□□□ -0.49
PKP4-213ENST00000486254 NOD2Q9HC29 1040 aa12.02□□□□□ -0.49
PKP4-213ENST00000486254 SCUBE2Q9NQ36 999 aa12.02□□□□□ -0.49
PKP4-213ENST00000486254 TRAV19A0A0A6YYK7 116 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 CAPN14A8MX76 684 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 SLCO1B7G3V0H7 640 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 H7C0S8 307 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 FCHO1O14526 889 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 WFS1O76024 890 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 TMCC1O94876 653 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 GLP2RO95838 553 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 CD160O95971 181 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 S1PR4O95977 384 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 PRLP01236 227 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 POU2F2P09086 479 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 RBP1P09455 135 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 PLK1P53350 603 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 AQP5P55064 265 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 HSF5Q4G112 596 aaPredicted RBP12.01□□□□□ -0.49
PKP4-213ENST00000486254 METTL21CQ5VZV1 264 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 KLC3Q6P597 504 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 AFTPHQ6ULP2 937 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 ZCCHC23Q6ZST2 131 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 PIWIL4Q7Z3Z4 852 aaKnown RBP12.01□□□□□ -0.49
PKP4-213ENST00000486254 TBC1D1Q86TI0 1168 aaPredicted RBP12.01□□□□□ -0.49
PKP4-213ENST00000486254 PACS2Q86VP3 889 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 SLC41A1Q8IVJ1 513 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 ZNF557Q8N988 423 aaPredicted RBP12.01□□□□□ -0.49
PKP4-213ENST00000486254 LEMD2Q8NC56 503 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 HDAC10Q969S8 669 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 TMA16Q96EY4 203 aaKnown RBP12.01□□□□□ -0.49
PKP4-213ENST00000486254 THOC1Q96FV9 657 aaKnown RBP12.01□□□□□ -0.49
PKP4-213ENST00000486254 ELMO2Q96JJ3 720 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 SPON2Q9BUD6 331 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 MUC3BQ9H195 1237 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 MMADHCQ9H3L0 296 aaPredicted RBP12.01□□□□□ -0.49
PKP4-213ENST00000486254 LHX3Q9UBR4 397 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 ARHGAP26Q9UNA1 814 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 APOBEC2Q9Y235 224 aaKnown RBP12.01□□□□□ -0.49
PKP4-213ENST00000486254 DNAJC16Q9Y2G8 782 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 RAP2CQ9Y3L5 183 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 CPQQ9Y646 472 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 C2orf81A6NN90 581 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 H0Y626 953 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 CBX4O00257 560 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 ZNF195O14628 629 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 PHGDHO43175 533 aaKnown RBP12.01□□□□□ -0.49
PKP4-213ENST00000486254 ITM2AO43736 263 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 NPHS1O60500 1241 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 TBL1XO60907 577 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 FGBP02675 491 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 LTA4HP09960 611 aaKnown RBP12.01□□□□□ -0.49
PKP4-213ENST00000486254 SBK3P0C264 359 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 AOC1P19801 751 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 ATP5F1P24539 256 aaPredicted RBP12.01□□□□□ -0.49
PKP4-213ENST00000486254 GABRR2P28476 465 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 ARSDP51689 593 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 STC1P52823 247 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 GALNT1Q10472 559 aaPredicted RBP12.01□□□□□ -0.49
PKP4-213ENST00000486254 PRKAA1Q13131 559 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms