RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 PGLSO95336 258 aa11.47□□□□□ -0.57
NUP50-216ENST00000486184 ECEL1O95672 775 aa11.47□□□□□ -0.57
NUP50-216ENST00000486184 MT-CYBP00156 380 aaPredicted RBP11.47□□□□□ -0.57
NUP50-216ENST00000486184 CYP2A6P11509 494 aaPredicted RBP11.47□□□□□ -0.57
NUP50-216ENST00000486184 ACSL1P33121 698 aa11.47□□□□□ -0.57
NUP50-216ENST00000486184 FDFT1P37268 417 aa11.47□□□□□ -0.57
NUP50-216ENST00000486184 ADPRHP54922 357 aa11.47□□□□□ -0.57
NUP50-216ENST00000486184 RPL26P61254 145 aaKnown RBP11.47□□□□□ -0.57
NUP50-216ENST00000486184 CDK18Q07002 472 aa11.47□□□□□ -0.57
NUP50-216ENST00000486184 TCF15Q12870 199 aa11.47□□□□□ -0.57
NUP50-216ENST00000486184 SRSF5Q13243 272 aaKnown RBP11.47□□□□□ -0.57
NUP50-216ENST00000486184 TUBB2AQ13885 445 aa11.47□□□□□ -0.57
NUP50-216ENST00000486184 PPP1R7Q15435 360 aa11.47□□□□□ -0.57
NUP50-216ENST00000486184 UGP2Q16851 508 aa11.47□□□□□ -0.57
NUP50-216ENST00000486184 PARP6Q2NL67 630 aa11.47□□□□□ -0.57
NUP50-216ENST00000486184 LRRC73Q5JTD7 316 aa11.47□□□□□ -0.57
NUP50-216ENST00000486184 FAM182AQ5T1J6 154 aa11.47□□□□□ -0.57
NUP50-216ENST00000486184 USP45Q70EL2 814 aa11.47□□□□□ -0.57
NUP50-216ENST00000486184 KDELC2Q7Z4H8 507 aa11.47□□□□□ -0.57
NUP50-216ENST00000486184 PRPF39Q86UA1 669 aaKnown RBP11.47□□□□□ -0.57
NUP50-216ENST00000486184 KLHL7Q8IXQ5 586 aa11.47□□□□□ -0.57
NUP50-216ENST00000486184 TAB3Q8N5C8 712 aaPredicted RBP11.47□□□□□ -0.57
NUP50-216ENST00000486184 FRMD1Q8N878 549 aa11.47□□□□□ -0.57
NUP50-216ENST00000486184 IPMKQ8NFU5 416 aa11.47□□□□□ -0.57
NUP50-216ENST00000486184 OR2T34Q8NGX1 318 aa11.47□□□□□ -0.57
NUP50-216ENST00000486184 CXorf40AQ8TE69 158 aa11.47□□□□□ -0.57
NUP50-216ENST00000486184 SNX19Q92543 992 aa11.47□□□□□ -0.57
NUP50-216ENST00000486184 FOXJ1Q92949 421 aa11.47□□□□□ -0.57
NUP50-216ENST00000486184 ECHDC3Q96DC8 303 aa11.47□□□□□ -0.57
NUP50-216ENST00000486184 TUBB2BQ9BVA1 445 aa11.47□□□□□ -0.57
NUP50-216ENST00000486184 DDX47Q9H0S4 455 aaKnown RBP11.47□□□□□ -0.57
NUP50-216ENST00000486184 PCED1AQ9H1Q7 454 aa11.47□□□□□ -0.57
NUP50-216ENST00000486184 PREBQ9HCU5 417 aa11.47□□□□□ -0.57
NUP50-216ENST00000486184 CDC23Q9UJX2 597 aa11.47□□□□□ -0.57
NUP50-216ENST00000486184 RPL26L1Q9UNX3 145 aaKnown RBP11.47□□□□□ -0.57
NUP50-216ENST00000486184 ARIH1Q9Y4X5 557 aaPredicted RBP11.47□□□□□ -0.57
NUP50-216ENST00000486184 R4GN57 208 aa11.47□□□□□ -0.57
NUP50-216ENST00000486184 PLXNA2O75051 1894 aa11.46□□□□□ -0.57
NUP50-216ENST00000486184 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.46□□□□□ -0.57
NUP50-216ENST00000486184 ESPNB1AK53 854 aa11.46□□□□□ -0.57
NUP50-216ENST00000486184 HRO43593 1189 aa11.46□□□□□ -0.57
NUP50-216ENST00000486184 TSPAN6O43657 245 aa11.46□□□□□ -0.57
NUP50-216ENST00000486184 AP1G1O43747 822 aa11.46□□□□□ -0.57
NUP50-216ENST00000486184 LILRB5O75023 590 aa11.46□□□□□ -0.57
NUP50-216ENST00000486184 FSBPO95073 299 aa11.46□□□□□ -0.57
NUP50-216ENST00000486184 KRT14P02533 472 aa11.46□□□□□ -0.57
NUP50-216ENST00000486184 MMP2P08253 660 aa11.46□□□□□ -0.57
NUP50-216ENST00000486184 TIMP2P16035 220 aa11.46□□□□□ -0.57
NUP50-216ENST00000486184 BCKDHBP21953 392 aa11.46□□□□□ -0.57
NUP50-216ENST00000486184 ABL2P42684 1182 aa11.46□□□□□ -0.57
NUP50-216ENST00000486184 GRIA4P48058 902 aa11.46□□□□□ -0.57
NUP50-216ENST00000486184 DHPSP49366 369 aaPredicted RBP11.46□□□□□ -0.57
NUP50-216ENST00000486184 WNT3AP56704 352 aa11.46□□□□□ -0.57
NUP50-216ENST00000486184 BASP1P80723 227 aaKnown RBP11.46□□□□□ -0.57
NUP50-216ENST00000486184 ARHGEF7Q14155 803 aa11.46□□□□□ -0.57
NUP50-216ENST00000486184 GALNT3Q14435 633 aa11.46□□□□□ -0.57
NUP50-216ENST00000486184 WHAMMP3Q1A5X7 153 aa11.46□□□□□ -0.57
NUP50-216ENST00000486184 SYCP2LQ5T4T6 812 aa11.46□□□□□ -0.57
NUP50-216ENST00000486184 KIAA1161Q6NSJ0 714 aa11.46□□□□□ -0.57
NUP50-216ENST00000486184 TTC27Q6P3X3 843 aa11.46□□□□□ -0.57
NUP50-216ENST00000486184 TMEFF1Q8IYR6 380 aa11.46□□□□□ -0.57
NUP50-216ENST00000486184 CCHCR1Q8TD31 782 aa11.46□□□□□ -0.57
NUP50-216ENST00000486184 FEM1CQ96JP0 617 aa11.46□□□□□ -0.57
NUP50-216ENST00000486184 FICDQ9BVA6 458 aa11.46□□□□□ -0.57
NUP50-216ENST00000486184 PCDH12Q9NPG4 1184 aa11.46□□□□□ -0.57
NUP50-216ENST00000486184 MBD1Q9UIS9 605 aaPredicted RBP11.46□□□□□ -0.57
NUP50-216ENST00000486184 TPX2Q9ULW0 747 aaKnown RBP11.46□□□□□ -0.57
NUP50-216ENST00000486184 RALGAPA1Q6GYQ0 2036 aa11.46□□□□□ -0.57
NUP50-216ENST00000486184 TP53BP1Q12888 1972 aaPredicted RBP11.46□□□□□ -0.58
NUP50-216ENST00000486184 ABCA7Q8IZY2 2146 aa11.45□□□□□ -0.58
NUP50-216ENST00000486184 ERI2A8K979 691 aaKnown RBP11.45□□□□□ -0.58
NUP50-216ENST00000486184 RNGTTO60942 597 aaKnown RBP11.45□□□□□ -0.58
NUP50-216ENST00000486184 METTL18O95568 372 aa11.45□□□□□ -0.58
NUP50-216ENST00000486184 NDST3O95803 873 aa11.45□□□□□ -0.58
NUP50-216ENST00000486184 PRKCGP05129 697 aa11.45□□□□□ -0.58
NUP50-216ENST00000486184 PDHA1P08559 390 aa11.45□□□□□ -0.58
NUP50-216ENST00000486184 ELFN1P0C7U0 828 aa11.45□□□□□ -0.58
NUP50-216ENST00000486184 ETS1P14921 441 aa11.45□□□□□ -0.58
NUP50-216ENST00000486184 CTPS1P17812 591 aa11.45□□□□□ -0.58
NUP50-216ENST00000486184 HLA-DPA1P20036 260 aa11.45□□□□□ -0.58
NUP50-216ENST00000486184 VPS41P49754 854 aa11.45□□□□□ -0.58
NUP50-216ENST00000486184 RPS21P63220 83 aaKnown RBP11.45□□□□□ -0.58
NUP50-216ENST00000486184 DR1Q01658 176 aa11.45□□□□□ -0.58
NUP50-216ENST00000486184 TRIP13Q15645 432 aaPredicted RBP11.45□□□□□ -0.58
NUP50-216ENST00000486184 SPDYCQ5MJ68 293 aa11.45□□□□□ -0.58
NUP50-216ENST00000486184 WDR45BQ5MNZ6 344 aa11.45□□□□□ -0.58
NUP50-216ENST00000486184 FAXCQ5TGI0 409 aa11.45□□□□□ -0.58
NUP50-216ENST00000486184 LYSMD4Q5XG99 296 aa11.45□□□□□ -0.58
NUP50-216ENST00000486184 PMS2CLQ68D20 193 aa11.45□□□□□ -0.58
NUP50-216ENST00000486184 KIAA0895LQ68EN5 471 aa11.45□□□□□ -0.58
NUP50-216ENST00000486184 NAPEPLDQ6IQ20 393 aa11.45□□□□□ -0.58
NUP50-216ENST00000486184 NEK5Q6P3R8 708 aa11.45□□□□□ -0.58
NUP50-216ENST00000486184 ARMCX6Q7L4S7 300 aa11.45□□□□□ -0.58
NUP50-216ENST00000486184 ZSWIM9Q86XI8 627 aa11.45□□□□□ -0.58
NUP50-216ENST00000486184 RGL4Q8IZJ4 473 aa11.45□□□□□ -0.58
NUP50-216ENST00000486184 SLC25A41Q8N5S1 370 aa11.45□□□□□ -0.58
NUP50-216ENST00000486184 DEFB119Q8N690 84 aa11.45□□□□□ -0.58
NUP50-216ENST00000486184 MNS1Q8NEH6 495 aa11.45□□□□□ -0.58
NUP50-216ENST00000486184 CADM4Q8NFZ8 388 aa11.45□□□□□ -0.58
NUP50-216ENST00000486184 PIH1D2Q8WWB5 315 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms