RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 SLC26A9Q7LBE3 791 aa9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 TFAP2DQ7Z6R9 452 aa9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 PDZD3Q86UT5 571 aa9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 SH2D3CQ8N5H7 860 aa9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 OR7D4Q8NG98 312 aa9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 TEKT4Q8WW24 435 aa9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 FAM131CQ96AQ9 280 aa9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 LRIG1Q96JA1 1093 aa9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 NPY6RQ99463 290 aa9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 FOXP3Q9BZS1 431 aa9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 TNKS2Q9H2K2 1166 aa9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 METTL5Q9NRN9 209 aaKnown RBP9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 TMEM51Q9NW97 253 aa9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 UCKL1Q9NWZ5 548 aa9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 WHRNQ9P202 907 aa9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 FTSJ1Q9UET6 329 aa9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 MTRF1LQ9UGC7 380 aaKnown RBP9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 VPS28Q9UK41 221 aa9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 NFU1Q9UMS0 254 aa9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 DRG1Q9Y295 367 aaKnown RBP9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 TDRD6O60522 2096 aaKnown RBP9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 GOLGA6BA6NDN3 693 aa9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 TRIM38O00635 465 aa9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 SLC31A1O15431 190 aa9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 RNGTTO60942 597 aaKnown RBP9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 LRCH4O75427 683 aa9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 ADH1BP00325 375 aa9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 ITIH2P19823 946 aa9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 ITPKBP27987 946 aa9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 EPHA8P29322 1005 aaPredicted RBP9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 NOS2P35228 1153 aa9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 FLT3P36888 993 aa9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 PTPN9P43378 593 aa9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 CXCR3P49682 368 aa9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 ACADVLP49748 655 aa9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 CLDN2P57739 230 aa9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 OGDHQ02218 1023 aa9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 SLC25A11Q02978 314 aaKnown RBP9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 ZNF177Q13360 481 aaPredicted RBP9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 PTK6Q13882 451 aa9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 ELAVL3Q14576 367 aaKnown RBP9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 PDK2Q15119 407 aa9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 C5orf22Q49AR2 442 aa9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 ZNF542PQ5EBM4 170 aa9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 RABGAP1LQ5R372 815 aa9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 PIP5KL1Q5T9C9 394 aa9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 LRIG3Q6UXM1 1119 aa9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 CROCCP2Q86T23 111 aa9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 MAP7D3Q8IWC1 876 aa9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 SLC25A45Q8N413 288 aa9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 ZNF557Q8N988 423 aaPredicted RBP9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 CCDC89Q8N998 374 aa9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 NETO2Q8NC67 525 aa9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 OR2A12Q8NGT7 310 aa9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 OR8D1Q8WZ84 308 aa9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 RUFY1Q96T51 708 aa9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 KCNK17Q96T54 332 aa9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 MUC3BQ9H195 1237 aa9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 ARHGEF38Q9NXL2 777 aa9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 SLC12A6Q9UHW9 1150 aa9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 VPS51Q9UID3 782 aa9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 SLC25A13Q9UJS0 675 aa9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 ZFR2Q9UPR6 939 aaKnown RBP9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 TBC1D30Q9Y2I9 924 aa9.53□□□□□ -0.88
TMEM39A-208ENST00000486159 GOLGA4Q13439 2230 aaKnown RBP9.52□□□□□ -0.88
TMEM39A-208ENST00000486159 COL5A1P20908 1838 aaPredicted RBP9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 hCG_1818297A0A087WSY0 165 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 A0A1W2PQU0 124 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 DRGXA6NNA5 263 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 KPNA3O00505 521 aaPredicted RBP9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 MCF2LO15068 1137 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 CASC3O15234 703 aaKnown RBP9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 DAPK3O43293 454 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 TLX3O43711 291 aaPredicted RBP9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 ZNF189O75820 626 aaPredicted RBP9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 CD160O95971 181 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 RHOCP08134 193 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 SDC4P31431 198 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 GKP32189 559 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 NNMTP40261 264 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 CDKN2BP42772 138 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 CDH4P55283 916 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 SULT2A1Q06520 285 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 CALCOCO2Q13137 446 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 TARDBPQ13148 414 aaKnown RBP eCLIP9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 SLC12A1Q13621 1099 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 TFDP2Q14188 446 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 FGL2Q14314 439 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 SLMAPQ14BN4 828 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 PPP1R7Q15435 360 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 ZFYVE27Q5T4F4 411 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 SEL1L3Q68CR1 1132 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 NAPEPLDQ6IQ20 393 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 AADACL2Q6P093 401 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 LEKR1Q6ZMV7 388 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 PRPF39Q86UA1 669 aaKnown RBP9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 CPNE8Q86YQ8 564 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 PSTKQ8IV42 348 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms