RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 KCNH6Q9H252 994 aa11.96□□□□□ -0.49
APTX-227ENST00000485479 SGK2Q9HBY8 427 aa11.96□□□□□ -0.49
APTX-227ENST00000485479 KCND1Q9NSA2 647 aa11.96□□□□□ -0.49
APTX-227ENST00000485479 RAB23Q9ULC3 237 aa11.96□□□□□ -0.49
APTX-227ENST00000485479 EP300Q09472 2414 aaPredicted RBP11.96□□□□□ -0.49
APTX-227ENST00000485479 BCLAF3A2AJT9 711 aaKnown RBP11.96□□□□□ -0.5
APTX-227ENST00000485479 IGLON5A6NGN9 336 aa11.96□□□□□ -0.5
APTX-227ENST00000485479 NPIPB15A6NHN6 443 aaPredicted RBP11.96□□□□□ -0.5
APTX-227ENST00000485479 H0Y8X5 98 aa11.96□□□□□ -0.5
APTX-227ENST00000485479 PGRMC1O00264 195 aaKnown RBP11.96□□□□□ -0.5
APTX-227ENST00000485479 HTRA2O43464 458 aaPredicted RBP11.96□□□□□ -0.5
APTX-227ENST00000485479 USP12O75317 370 aa11.96□□□□□ -0.5
APTX-227ENST00000485479 METTL18O95568 372 aa11.96□□□□□ -0.5
APTX-227ENST00000485479 CPP00450 1065 aa11.96□□□□□ -0.5
APTX-227ENST00000485479 C7P10643 843 aa11.96□□□□□ -0.5
APTX-227ENST00000485479 SPEM2Q0P670 501 aa11.96□□□□□ -0.5
APTX-227ENST00000485479 SLC36A4Q6YBV0 504 aa11.96□□□□□ -0.5
APTX-227ENST00000485479 RASGEF1CQ8N431 466 aa11.96□□□□□ -0.5
APTX-227ENST00000485479 IPMKQ8NFU5 416 aa11.96□□□□□ -0.5
APTX-227ENST00000485479 OR2T34Q8NGX1 318 aa11.96□□□□□ -0.5
APTX-227ENST00000485479 ZNF592Q92610 1267 aa11.96□□□□□ -0.5
APTX-227ENST00000485479 FAM131CQ96AQ9 280 aa11.96□□□□□ -0.5
APTX-227ENST00000485479 ZC3H10Q96K80 434 aaKnown RBP11.96□□□□□ -0.5
APTX-227ENST00000485479 ZNF641Q96N77 438 aaPredicted RBP11.96□□□□□ -0.5
APTX-227ENST00000485479 B4GALT6Q9UBX8 382 aa11.96□□□□□ -0.5
APTX-227ENST00000485479 OTOGLQ3ZCN5 2332 aa11.95□□□□□ -0.5
APTX-227ENST00000485479 LRRC72A6NJI9 287 aa11.95□□□□□ -0.5
APTX-227ENST00000485479 METTL12A8MUP2 240 aa11.95□□□□□ -0.5
APTX-227ENST00000485479 PDE2AO00408 941 aaPredicted RBP11.95□□□□□ -0.5
APTX-227ENST00000485479 AREL1O15033 823 aa11.95□□□□□ -0.5
APTX-227ENST00000485479 PGLSO95336 258 aa11.95□□□□□ -0.5
APTX-227ENST00000485479 PAK4O96013 591 aaPredicted RBP11.95□□□□□ -0.5
APTX-227ENST00000485479 LHCGRP22888 699 aa11.95□□□□□ -0.5
APTX-227ENST00000485479 VPS41P49754 854 aa11.95□□□□□ -0.5
APTX-227ENST00000485479 ETF1P62495 437 aaKnown RBP11.95□□□□□ -0.5
APTX-227ENST00000485479 ARMC12Q5T9G4 340 aa11.95□□□□□ -0.5
APTX-227ENST00000485479 KIAA0895LQ68EN5 471 aa11.95□□□□□ -0.5
APTX-227ENST00000485479 NYAP1Q6ZVC0 841 aa11.95□□□□□ -0.5
APTX-227ENST00000485479 CYP2U1Q7Z449 544 aa11.95□□□□□ -0.5
APTX-227ENST00000485479 SLC25A41Q8N5S1 370 aa11.95□□□□□ -0.5
APTX-227ENST00000485479 PIH1D2Q8WWB5 315 aa11.95□□□□□ -0.5
APTX-227ENST00000485479 PBKQ96KB5 322 aa11.95□□□□□ -0.5
APTX-227ENST00000485479 SLC6A18Q96N87 628 aa11.95□□□□□ -0.5
APTX-227ENST00000485479 SPATA13Q96N96 652 aa11.95□□□□□ -0.5
APTX-227ENST00000485479 MLPHQ9BV36 600 aaPredicted RBP11.95□□□□□ -0.5
APTX-227ENST00000485479 SLC25A51Q9H1U9 297 aa11.95□□□□□ -0.5
APTX-227ENST00000485479 GBA3Q9H227 469 aa11.95□□□□□ -0.5
APTX-227ENST00000485479 PCDH9Q9HC56 1237 aa11.95□□□□□ -0.5
APTX-227ENST00000485479 PI4KAP42356 2102 aa11.95□□□□□ -0.5
APTX-227ENST00000485479 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.94□□□□□ -0.5
APTX-227ENST00000485479 RIOK3O14730 519 aaKnown RBP11.94□□□□□ -0.5
APTX-227ENST00000485479 RHOBTB1O94844 696 aa11.94□□□□□ -0.5
APTX-227ENST00000485479 CASQ1P31415 396 aa11.94□□□□□ -0.5
APTX-227ENST00000485479 MMP12P39900 470 aa11.94□□□□□ -0.5
APTX-227ENST00000485479 MPLP40238 635 aa11.94□□□□□ -0.5
APTX-227ENST00000485479 MAPK8P45983 427 aa11.94□□□□□ -0.5
APTX-227ENST00000485479 EPHB1P54762 984 aa11.94□□□□□ -0.5
APTX-227ENST00000485479 CLDN2P57739 230 aa11.94□□□□□ -0.5
APTX-227ENST00000485479 MRPS25P82663 173 aaKnown RBP11.94□□□□□ -0.5
APTX-227ENST00000485479 RALGDSQ12967 914 aa11.94□□□□□ -0.5
APTX-227ENST00000485479 PAPD7Q5XG87 772 aaKnown RBP11.94□□□□□ -0.5
APTX-227ENST00000485479 BRAT1Q6PJG6 821 aa11.94□□□□□ -0.5
APTX-227ENST00000485479 RFLNAQ6ZTI6 216 aa11.94□□□□□ -0.5
APTX-227ENST00000485479 CREG2Q8IUH2 290 aa11.94□□□□□ -0.5
APTX-227ENST00000485479 RMDN1Q96DB5 314 aa11.94□□□□□ -0.5
APTX-227ENST00000485479 ORAI3Q9BRQ5 295 aa11.94□□□□□ -0.5
APTX-227ENST00000485479 RXFP3Q9NSD7 469 aa11.94□□□□□ -0.5
APTX-227ENST00000485479 NCDNQ9UBB6 729 aa11.94□□□□□ -0.5
APTX-227ENST00000485479 DKK3Q9UBP4 350 aa11.94□□□□□ -0.5
APTX-227ENST00000485479 SAR1BQ9Y6B6 198 aa11.94□□□□□ -0.5
APTX-227ENST00000485479 KNL1Q8NG31 2342 aa11.94□□□□□ -0.5
APTX-227ENST00000485479 TSPAN11A1L157 253 aa11.94□□□□□ -0.5
APTX-227ENST00000485479 RAD51BO15315 384 aa11.94□□□□□ -0.5
APTX-227ENST00000485479 MTSS1O43312 755 aa11.94□□□□□ -0.5
APTX-227ENST00000485479 FZD6O60353 706 aa11.94□□□□□ -0.5
APTX-227ENST00000485479 SOCS5O75159 536 aa11.94□□□□□ -0.5
APTX-227ENST00000485479 AGTP01019 485 aa11.94□□□□□ -0.5
APTX-227ENST00000485479 WNT3AP56704 352 aa11.94□□□□□ -0.5
APTX-227ENST00000485479 MTM1Q13496 603 aa11.94□□□□□ -0.5
APTX-227ENST00000485479 GRM3Q14832 879 aa11.94□□□□□ -0.5
APTX-227ENST00000485479 SF3A2Q15428 464 aaKnown RBP11.94□□□□□ -0.5
APTX-227ENST00000485479 ZNF284Q2VY69 593 aa11.94□□□□□ -0.5
APTX-227ENST00000485479 ARHGEF18Q6ZSZ5 1173 aa11.94□□□□□ -0.5
APTX-227ENST00000485479 MICALCLQ6ZW33 695 aa11.94□□□□□ -0.5
APTX-227ENST00000485479 GSTA5Q7RTV2 222 aa11.94□□□□□ -0.5
APTX-227ENST00000485479 OR2I1PQ8NGU4 316 aa11.94□□□□□ -0.5
APTX-227ENST00000485479 MAGOHBQ96A72 148 aaKnown RBP11.94□□□□□ -0.5
APTX-227ENST00000485479 MRGPRX2Q96LB1 330 aa11.94□□□□□ -0.5
APTX-227ENST00000485479 DDX47Q9H0S4 455 aaKnown RBP11.94□□□□□ -0.5
APTX-227ENST00000485479 IRF2BPLQ9H1B7 796 aa11.94□□□□□ -0.5
APTX-227ENST00000485479 SEMA4AQ9H3S1 761 aa11.94□□□□□ -0.5
APTX-227ENST00000485479 PARD6AQ9NPB6 346 aa11.94□□□□□ -0.5
APTX-227ENST00000485479 AMACRQ9UHK6 382 aa11.94□□□□□ -0.5
APTX-227ENST00000485479 SHOC2Q9UQ13 582 aa11.94□□□□□ -0.5
APTX-227ENST00000485479 MYLKQ15746 1914 aa11.93□□□□□ -0.5
APTX-227ENST00000485479 RIF1Q5UIP0 2472 aaKnown RBP11.93□□□□□ -0.5
APTX-227ENST00000485479 SLC7A4O43246 635 aa11.93□□□□□ -0.5
APTX-227ENST00000485479 STK10O94804 968 aaKnown RBP11.93□□□□□ -0.5
APTX-227ENST00000485479 CFIP05156 583 aa11.93□□□□□ -0.5
APTX-227ENST00000485479 C6P13671 934 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms