RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 LIG3P49916 1009 aa19.39■□□□□ 0.69
COL27A1-205ENST00000485397 PAPOLAP51003 745 aaKnown RBP19.39■□□□□ 0.69
COL27A1-205ENST00000485397 BLKP51451 505 aa19.39■□□□□ 0.69
COL27A1-205ENST00000485397 PDX1P52945 283 aa19.39■□□□□ 0.69
COL27A1-205ENST00000485397 INPP5AQ14642 412 aa19.39■□□□□ 0.69
COL27A1-205ENST00000485397 NFATC4Q14934 902 aa19.39■□□□□ 0.69
COL27A1-205ENST00000485397 NCAPHQ15003 741 aa19.39■□□□□ 0.69
COL27A1-205ENST00000485397 KCTD16Q68DU8 428 aa19.39■□□□□ 0.69
COL27A1-205ENST00000485397 KYQ8NBH2 561 aa19.39■□□□□ 0.69
COL27A1-205ENST00000485397 PCDH19Q8TAB3 1148 aa19.39■□□□□ 0.69
COL27A1-205ENST00000485397 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.39■□□□□ 0.69
COL27A1-205ENST00000485397 HSD3B7Q9H2F3 369 aa19.39■□□□□ 0.69
COL27A1-205ENST00000485397 DHX35Q9H5Z1 703 aaKnown RBP19.39■□□□□ 0.69
COL27A1-205ENST00000485397 RABGEF1Q9UJ41 708 aa19.39■□□□□ 0.69
COL27A1-205ENST00000485397 AP4E1Q9UPM8 1137 aa19.39■□□□□ 0.69
COL27A1-205ENST00000485397 OR1A2Q9Y585 309 aa19.39■□□□□ 0.69
COL27A1-205ENST00000485397 PCDHGA8Q9Y5G5 932 aa19.39■□□□□ 0.69
COL27A1-205ENST00000485397 KIF26BQ2KJY2 2108 aa19.39■□□□□ 0.69
COL27A1-205ENST00000485397 TMEM110-MUSTN1A8MSY1 372 aa19.38■□□□□ 0.69
COL27A1-205ENST00000485397 EEF2KO00418 725 aaKnown RBP19.38■□□□□ 0.69
COL27A1-205ENST00000485397 RASGRP1O95267 797 aa19.38■□□□□ 0.69
COL27A1-205ENST00000485397 FERP16591 822 aa19.38■□□□□ 0.69
COL27A1-205ENST00000485397 TNFAIP3P21580 790 aa19.38■□□□□ 0.69
COL27A1-205ENST00000485397 PSMA2P25787 234 aa19.38■□□□□ 0.69
COL27A1-205ENST00000485397 MMP12P39900 470 aa19.38■□□□□ 0.69
COL27A1-205ENST00000485397 NDST2P52849 883 aa19.38■□□□□ 0.69
COL27A1-205ENST00000485397 UCNP55089 124 aa19.38■□□□□ 0.69
COL27A1-205ENST00000485397 MAMLD1Q13495 774 aa19.38■□□□□ 0.69
COL27A1-205ENST00000485397 SPIDRQ14159 915 aa19.38■□□□□ 0.69
COL27A1-205ENST00000485397 GRM3Q14832 879 aa19.38■□□□□ 0.69
COL27A1-205ENST00000485397 ELOCQ15369 112 aa19.38■□□□□ 0.69
COL27A1-205ENST00000485397 CFAP58Q5T655 872 aa19.38■□□□□ 0.69
COL27A1-205ENST00000485397 ERAP2Q6P179 960 aa19.38■□□□□ 0.69
COL27A1-205ENST00000485397 IRF2BP2Q7Z5L9 587 aa19.38■□□□□ 0.69
COL27A1-205ENST00000485397 SRLQ86TD4 932 aa19.38■□□□□ 0.69
COL27A1-205ENST00000485397 ZNF843Q8N446 348 aa19.38■□□□□ 0.69
COL27A1-205ENST00000485397 ARFGAP1Q8N6T3 406 aa19.38■□□□□ 0.69
COL27A1-205ENST00000485397 ARL10Q8N8L6 244 aa19.38■□□□□ 0.69
COL27A1-205ENST00000485397 TSEN2Q8NCE0 465 aaKnown RBP19.38■□□□□ 0.69
COL27A1-205ENST00000485397 WDR36Q8NI36 951 aaKnown RBP19.38■□□□□ 0.69
COL27A1-205ENST00000485397 ZNF641Q96N77 438 aaPredicted RBP19.38■□□□□ 0.69
COL27A1-205ENST00000485397 PEBP4Q96S96 227 aa19.38■□□□□ 0.69
COL27A1-205ENST00000485397 SYT11Q9BT88 431 aa19.38■□□□□ 0.69
COL27A1-205ENST00000485397 DPH1Q9BZG8 443 aa19.38■□□□□ 0.69
COL27A1-205ENST00000485397 PCSK1NQ9UHG2 260 aa19.38■□□□□ 0.69
COL27A1-205ENST00000485397 ATP8A1Q9Y2Q0 1164 aa19.38■□□□□ 0.69
COL27A1-205ENST00000485397 LRRK1Q38SD2 2015 aa19.37■□□□□ 0.69
COL27A1-205ENST00000485397 ARHGAP42A6NI28 874 aa19.37■□□□□ 0.69
COL27A1-205ENST00000485397 NTN3O00634 580 aaPredicted RBP19.37■□□□□ 0.69
COL27A1-205ENST00000485397 ATMINO43313 823 aaPredicted RBP19.37■□□□□ 0.69
COL27A1-205ENST00000485397 ALPIP09923 528 aa19.37■□□□□ 0.69
COL27A1-205ENST00000485397 ATP1A3P13637 1013 aa19.37■□□□□ 0.69
COL27A1-205ENST00000485397 HTR1BP28222 390 aa19.37■□□□□ 0.69
COL27A1-205ENST00000485397 HTR7P34969 479 aa19.37■□□□□ 0.69
COL27A1-205ENST00000485397 SRP54P61011 504 aaKnown RBP19.37■□□□□ 0.69
COL27A1-205ENST00000485397 SKOR1P84550 965 aa19.37■□□□□ 0.69
COL27A1-205ENST00000485397 CFHR1Q03591 330 aa19.37■□□□□ 0.69
COL27A1-205ENST00000485397 STX1AQ16623 288 aa19.37■□□□□ 0.69
COL27A1-205ENST00000485397 TAF1BQ53T94 588 aaPredicted RBP19.37■□□□□ 0.69
COL27A1-205ENST00000485397 BRAT1Q6PJG6 821 aa19.37■□□□□ 0.69
COL27A1-205ENST00000485397 LVRNQ6Q4G3 990 aa19.37■□□□□ 0.69
COL27A1-205ENST00000485397 ARHGAP36Q6ZRI8 547 aa19.37■□□□□ 0.69
COL27A1-205ENST00000485397 PLA2G15Q8NCC3 412 aa19.37■□□□□ 0.69
COL27A1-205ENST00000485397 WDR48Q8TAF3 677 aa19.37■□□□□ 0.69
COL27A1-205ENST00000485397 SCG3Q8WXD2 468 aaKnown RBP19.37■□□□□ 0.69
COL27A1-205ENST00000485397 CCDC74AQ96AQ1 378 aa19.37■□□□□ 0.69
COL27A1-205ENST00000485397 TUBGCP5Q96RT8 1024 aa19.37■□□□□ 0.69
COL27A1-205ENST00000485397 KCTD15Q96SI1 283 aaPredicted RBP19.37■□□□□ 0.69
COL27A1-205ENST00000485397 KLQ9UEF7 1012 aa19.37■□□□□ 0.69
COL27A1-205ENST00000485397 GPR34Q9UPC5 381 aa19.37■□□□□ 0.69
COL27A1-205ENST00000485397 CCDC187A0A096LP49 1063 aa19.36■□□□□ 0.69
COL27A1-205ENST00000485397 CDRT15L2A8MXV6 281 aa19.36■□□□□ 0.69
COL27A1-205ENST00000485397 ERVH48-1M5A8F1 160 aa19.36■□□□□ 0.69
COL27A1-205ENST00000485397 TEX33O43247 280 aa19.36■□□□□ 0.69
COL27A1-205ENST00000485397 PALMO75781 387 aa19.36■□□□□ 0.69
COL27A1-205ENST00000485397 TNFSF15O95150 251 aa19.36■□□□□ 0.69
COL27A1-205ENST00000485397 CCDC172P0C7W6 258 aa19.36■□□□□ 0.69
COL27A1-205ENST00000485397 DESP17661 470 aa19.36■□□□□ 0.69
COL27A1-205ENST00000485397 CSNK1DP48730 415 aa19.36■□□□□ 0.69
COL27A1-205ENST00000485397 CCL7P80098 99 aa19.36■□□□□ 0.69
COL27A1-205ENST00000485397 RALGDSQ12967 914 aa19.36■□□□□ 0.69
COL27A1-205ENST00000485397 AGERQ15109 404 aa19.36■□□□□ 0.69
COL27A1-205ENST00000485397 ERMARDQ5T6L9 678 aa19.36■□□□□ 0.69
COL27A1-205ENST00000485397 B3GNT8Q7Z7M8 397 aa19.36■□□□□ 0.69
COL27A1-205ENST00000485397 GKN2Q86XP6 184 aa19.36■□□□□ 0.69
COL27A1-205ENST00000485397 ARHGAP12Q8IWW6 846 aa19.36■□□□□ 0.69
COL27A1-205ENST00000485397 PDXPQ96GD0 296 aa19.36■□□□□ 0.69
COL27A1-205ENST00000485397 WDR92Q96MX6 357 aa19.36■□□□□ 0.69
COL27A1-205ENST00000485397 SNRNP25Q9BV90 132 aaKnown RBP19.36■□□□□ 0.69
COL27A1-205ENST00000485397 DONSONQ9NYP3 566 aa19.36■□□□□ 0.69
COL27A1-205ENST00000485397 SSUH2Q9Y2M2 353 aa19.36■□□□□ 0.69
COL27A1-205ENST00000485397 DAPK3O43293 454 aa19.35■□□□□ 0.69
COL27A1-205ENST00000485397 TNFP01375 233 aa19.35■□□□□ 0.69
COL27A1-205ENST00000485397 ERCC2P18074 760 aa19.35■□□□□ 0.69
COL27A1-205ENST00000485397 SERPINA4P29622 427 aa19.35■□□□□ 0.69
COL27A1-205ENST00000485397 RHDQ02161 417 aa19.35■□□□□ 0.69
COL27A1-205ENST00000485397 VAC14Q08AM6 782 aa19.35■□□□□ 0.69
COL27A1-205ENST00000485397 MTM1Q13496 603 aa19.35■□□□□ 0.69
COL27A1-205ENST00000485397 AFMIDQ63HM1 303 aa19.35■□□□□ 0.69
COL27A1-205ENST00000485397 PLEKHA7Q6IQ23 1121 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms