RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 KCNK1O00180 336 aa19.27■□□□□ 0.68
SNX17-206ENST00000484886 RIOK3O14730 519 aaKnown RBP19.27■□□□□ 0.68
SNX17-206ENST00000484886 GIPC1O14908 333 aa19.27■□□□□ 0.68
SNX17-206ENST00000484886 RAD51BO15315 384 aa19.27■□□□□ 0.68
SNX17-206ENST00000484886 SH3BP5O60239 455 aa19.27■□□□□ 0.68
SNX17-206ENST00000484886 LZTS3O60299 673 aaPredicted RBP19.27■□□□□ 0.68
SNX17-206ENST00000484886 SOCS5O75159 536 aa19.27■□□□□ 0.68
SNX17-206ENST00000484886 JCHAINP01591 159 aa19.27■□□□□ 0.68
SNX17-206ENST00000484886 NFKBIAP25963 317 aa19.27■□□□□ 0.68
SNX17-206ENST00000484886 CTNNA1P35221 906 aaKnown RBP19.27■□□□□ 0.68
SNX17-206ENST00000484886 MMP12P39900 470 aa19.27■□□□□ 0.68
SNX17-206ENST00000484886 PPIDQ08752 370 aaKnown RBP19.27■□□□□ 0.68
SNX17-206ENST00000484886 CCDC181Q5TID7 509 aa19.27■□□□□ 0.68
SNX17-206ENST00000484886 GCNT7Q6ZNI0 430 aa19.27■□□□□ 0.68
SNX17-206ENST00000484886 BZW1Q7L1Q6 419 aaKnown RBP19.27■□□□□ 0.68
SNX17-206ENST00000484886 CCDC112Q8NEF3 446 aa19.27■□□□□ 0.68
SNX17-206ENST00000484886 OR13H1Q8NG92 308 aa19.27■□□□□ 0.68
SNX17-206ENST00000484886 EXD1Q8NHP7 514 aa19.27■□□□□ 0.68
SNX17-206ENST00000484886 FATE1Q969F0 183 aa19.27■□□□□ 0.68
SNX17-206ENST00000484886 ECHDC3Q96DC8 303 aa19.27■□□□□ 0.68
SNX17-206ENST00000484886 NSMCE3Q96MG7 304 aa19.27■□□□□ 0.68
SNX17-206ENST00000484886 COQ6Q9Y2Z9 468 aa19.27■□□□□ 0.68
SNX17-206ENST00000484886 HS3ST3A1Q9Y663 406 aa19.27■□□□□ 0.68
SNX17-206ENST00000484886 CNOT1A5YKK6 2376 aaKnown RBP19.26■□□□□ 0.67
SNX17-206ENST00000484886 A0A0U1RQJ8 604 aa19.26■□□□□ 0.67
SNX17-206ENST00000484886 A0A1W2PQ67 120 aa19.26■□□□□ 0.67
SNX17-206ENST00000484886 GRID2IPA4D2P6 1211 aa19.26■□□□□ 0.67
SNX17-206ENST00000484886 GOLGA6L3A6NEY3 463 aa19.26■□□□□ 0.67
SNX17-206ENST00000484886 A8MX80 341 aa19.26■□□□□ 0.67
SNX17-206ENST00000484886 TRAFD1O14545 582 aaPredicted RBP19.26■□□□□ 0.67
SNX17-206ENST00000484886 HLA-DQB2P05538 268 aa19.26■□□□□ 0.67
SNX17-206ENST00000484886 CEACAM1P13688 526 aa19.26■□□□□ 0.67
SNX17-206ENST00000484886 TGM2P21980 687 aa19.26■□□□□ 0.67
SNX17-206ENST00000484886 LIG3P49916 1009 aa19.26■□□□□ 0.67
SNX17-206ENST00000484886 DSC2Q02487 901 aa19.26■□□□□ 0.67
SNX17-206ENST00000484886 TRAF2Q12933 501 aa19.26■□□□□ 0.67
SNX17-206ENST00000484886 ARMC12Q5T9G4 340 aa19.26■□□□□ 0.67
SNX17-206ENST00000484886 Q6ZSR6 202 aa19.26■□□□□ 0.67
SNX17-206ENST00000484886 B4GALNT4Q76KP1 1039 aa19.26■□□□□ 0.67
SNX17-206ENST00000484886 PEX26Q7Z412 305 aa19.26■□□□□ 0.67
SNX17-206ENST00000484886 PIP4P1Q86T03 277 aa19.26■□□□□ 0.67
SNX17-206ENST00000484886 SPATS2Q86XZ4 545 aaKnown RBP19.26■□□□□ 0.67
SNX17-206ENST00000484886 SYCE1Q8N0S2 351 aa19.26■□□□□ 0.67
SNX17-206ENST00000484886 OXR1Q8N573 874 aa19.26■□□□□ 0.67
SNX17-206ENST00000484886 HAUS1Q96CS2 278 aa19.26■□□□□ 0.67
SNX17-206ENST00000484886 CAMK1GQ96NX5 476 aa19.26■□□□□ 0.67
SNX17-206ENST00000484886 HEMGNQ9BXL5 484 aa19.26■□□□□ 0.67
SNX17-206ENST00000484886 GRPEL1Q9HAV7 217 aa19.26■□□□□ 0.67
SNX17-206ENST00000484886 SAE1Q9UBE0 346 aaPredicted RBP19.26■□□□□ 0.67
SNX17-206ENST00000484886 AMACRQ9UHK6 382 aa19.26■□□□□ 0.67
SNX17-206ENST00000484886 AMFRQ9UKV5 643 aa19.26■□□□□ 0.67
SNX17-206ENST00000484886 PCDHGB2Q9Y5G2 931 aa19.26■□□□□ 0.67
SNX17-206ENST00000484886 RAI2Q9Y5P3 530 aa19.26■□□□□ 0.67
SNX17-206ENST00000484886 hCG_1818297A0A087WSY0 165 aa19.25■□□□□ 0.67
SNX17-206ENST00000484886 A0A1B0GTQ1 180 aa19.25■□□□□ 0.67
SNX17-206ENST00000484886 MED19A0JLT2 244 aaPredicted RBP19.25■□□□□ 0.67
SNX17-206ENST00000484886 CCDC66A2RUB6 948 aa19.25■□□□□ 0.67
SNX17-206ENST00000484886 YKT6O15498 198 aa19.25■□□□□ 0.67
SNX17-206ENST00000484886 FLRT2O43155 660 aa19.25■□□□□ 0.67
SNX17-206ENST00000484886 ARHGAP6O43182 974 aa19.25■□□□□ 0.67
SNX17-206ENST00000484886 NRDCO43847 1150 aa19.25■□□□□ 0.67
SNX17-206ENST00000484886 ELFN1P0C7U0 828 aa19.25■□□□□ 0.67
SNX17-206ENST00000484886 C6P13671 934 aa19.25■□□□□ 0.67
SNX17-206ENST00000484886 CES1P23141 567 aa19.25■□□□□ 0.67
SNX17-206ENST00000484886 CETN2P41208 172 aa19.25■□□□□ 0.67
SNX17-206ENST00000484886 NR2C2P49116 596 aa19.25■□□□□ 0.67
SNX17-206ENST00000484886 TAZQ16635 292 aa19.25■□□□□ 0.67
SNX17-206ENST00000484886 INAVAQ3KP66 663 aa19.25■□□□□ 0.67
SNX17-206ENST00000484886 KYAT3Q6YP21 454 aaKnown RBP19.25■□□□□ 0.67
SNX17-206ENST00000484886 ABI3BPQ7Z7G0 1075 aa19.25■□□□□ 0.67
SNX17-206ENST00000484886 LRRC57Q8N9N7 239 aa19.25■□□□□ 0.67
SNX17-206ENST00000484886 DENND6BQ8NEG7 585 aa19.25■□□□□ 0.67
SNX17-206ENST00000484886 FAM174AQ8TBP5 190 aa19.25■□□□□ 0.67
SNX17-206ENST00000484886 RHBDD1Q8TEB9 315 aa19.25■□□□□ 0.67
SNX17-206ENST00000484886 ASB12Q8WXK4 309 aa19.25■□□□□ 0.67
SNX17-206ENST00000484886 P3H4Q92791 437 aa19.25■□□□□ 0.67
SNX17-206ENST00000484886 OLFM3Q96PB7 478 aa19.25■□□□□ 0.67
SNX17-206ENST00000484886 LENG8Q96PV6 779 aaPredicted RBP19.25■□□□□ 0.67
SNX17-206ENST00000484886 CEP41Q9BYV8 373 aa19.25■□□□□ 0.67
SNX17-206ENST00000484886 TSGA10Q9BZW7 698 aa19.25■□□□□ 0.67
SNX17-206ENST00000484886 BRD8Q9H0E9 1235 aa19.25■□□□□ 0.67
SNX17-206ENST00000484886 PCDHA3Q9Y5H8 950 aa19.25■□□□□ 0.67
SNX17-206ENST00000484886 DCHS1Q96JQ0 3298 aa19.25■□□□□ 0.67
SNX17-206ENST00000484886 SPTBN2O15020 2390 aa19.24■□□□□ 0.67
SNX17-206ENST00000484886 POM121BA6NF01 834 aa19.24■□□□□ 0.67
SNX17-206ENST00000484886 HTRA2O43464 458 aaPredicted RBP19.24■□□□□ 0.67
SNX17-206ENST00000484886 PTMAP06454 111 aaKnown RBP19.24■□□□□ 0.67
SNX17-206ENST00000484886 ITGAVP06756 1048 aa19.24■□□□□ 0.67
SNX17-206ENST00000484886 PECAM1P16284 738 aaPredicted RBP19.24■□□□□ 0.67
SNX17-206ENST00000484886 CA4P22748 312 aa19.24■□□□□ 0.67
SNX17-206ENST00000484886 CTNNA2P26232 953 aa19.24■□□□□ 0.67
SNX17-206ENST00000484886 RABIFP47224 123 aa19.24■□□□□ 0.67
SNX17-206ENST00000484886 EPHB1P54762 984 aa19.24■□□□□ 0.67
SNX17-206ENST00000484886 RWDD2BP57060 319 aa19.24■□□□□ 0.67
SNX17-206ENST00000484886 IFI35P80217 286 aaPredicted RBP19.24■□□□□ 0.67
SNX17-206ENST00000484886 ZBTB17Q13105 803 aa19.24■□□□□ 0.67
SNX17-206ENST00000484886 DPPA4Q7L190 304 aa19.24■□□□□ 0.67
SNX17-206ENST00000484886 GATAD2AQ86YP4 633 aa19.24■□□□□ 0.67
SNX17-206ENST00000484886 BMFQ96LC9 184 aa19.24■□□□□ 0.67
SNX17-206ENST00000484886 KLF6Q99612 283 aaPredicted RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms