RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 GALNT2Q10471 571 aa12.99□□□□□ -0.33
HDAC1-209ENST00000484305 SLC10A2Q12908 348 aaPredicted RBP12.99□□□□□ -0.33
HDAC1-209ENST00000484305 DNAJC3Q13217 504 aa12.99□□□□□ -0.33
HDAC1-209ENST00000484305 ZFYVE27Q5T4F4 411 aa12.99□□□□□ -0.33
HDAC1-209ENST00000484305 MARC1Q5VT66 337 aa12.99□□□□□ -0.33
HDAC1-209ENST00000484305 ERAP2Q6P179 960 aa12.99□□□□□ -0.33
HDAC1-209ENST00000484305 UNQ6494/PRO21346Q6UXR6 183 aa12.99□□□□□ -0.33
HDAC1-209ENST00000484305 LRRC49Q8IUZ0 686 aa12.99□□□□□ -0.33
HDAC1-209ENST00000484305 LRRN4Q8WUT4 740 aa12.99□□□□□ -0.33
HDAC1-209ENST00000484305 NSMCE1Q8WV22 266 aa12.99□□□□□ -0.33
HDAC1-209ENST00000484305 GATA6Q92908 595 aa12.99□□□□□ -0.33
HDAC1-209ENST00000484305 IFT43Q96FT9 208 aa12.99□□□□□ -0.33
HDAC1-209ENST00000484305 NUDCD1Q96RS6 583 aa12.99□□□□□ -0.33
HDAC1-209ENST00000484305 MGME1Q9BQP7 344 aa12.99□□□□□ -0.33
HDAC1-209ENST00000484305 NOD2Q9HC29 1040 aa12.99□□□□□ -0.33
HDAC1-209ENST00000484305 SCUBE2Q9NQ36 999 aa12.99□□□□□ -0.33
HDAC1-209ENST00000484305 KLF15Q9UIH9 416 aa12.99□□□□□ -0.33
HDAC1-209ENST00000484305 INTUQ9ULD6 942 aa12.99□□□□□ -0.33
HDAC1-209ENST00000484305 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.98□□□□□ -0.33
HDAC1-209ENST00000484305 LRRD1A4D1F6 860 aa12.98□□□□□ -0.33
HDAC1-209ENST00000484305 C3orf70A6NLC5 250 aaPredicted RBP12.98□□□□□ -0.33
HDAC1-209ENST00000484305 A8MX80 341 aa12.98□□□□□ -0.33
HDAC1-209ENST00000484305 HTRA2O43464 458 aaPredicted RBP12.98□□□□□ -0.33
HDAC1-209ENST00000484305 SIGLEC6O43699 453 aa12.98□□□□□ -0.33
HDAC1-209ENST00000484305 HSPA9P38646 679 aaKnown RBP12.98□□□□□ -0.33
HDAC1-209ENST00000484305 POLR2LP62875 67 aaKnown RBP12.98□□□□□ -0.33
HDAC1-209ENST00000484305 GBE1Q04446 702 aa12.98□□□□□ -0.33
HDAC1-209ENST00000484305 RALGDSQ12967 914 aa12.98□□□□□ -0.33
HDAC1-209ENST00000484305 EIF2B5Q13144 721 aaKnown RBP12.98□□□□□ -0.33
HDAC1-209ENST00000484305 LRRC14Q15048 493 aa12.98□□□□□ -0.33
HDAC1-209ENST00000484305 TCEAL1Q15170 157 aa12.98□□□□□ -0.33
HDAC1-209ENST00000484305 IRF4Q15306 451 aa12.98□□□□□ -0.33
HDAC1-209ENST00000484305 PARGQ86W56 976 aa12.98□□□□□ -0.33
HDAC1-209ENST00000484305 BBS5Q8N3I7 341 aa12.98□□□□□ -0.33
HDAC1-209ENST00000484305 TEX26Q8N6G2 289 aa12.98□□□□□ -0.33
HDAC1-209ENST00000484305 PAF1Q8N7H5 531 aa12.98□□□□□ -0.33
HDAC1-209ENST00000484305 MRFAP1L1Q96HT8 127 aa12.98□□□□□ -0.33
HDAC1-209ENST00000484305 RNF157Q96PX1 679 aa12.98□□□□□ -0.33
HDAC1-209ENST00000484305 C1QTNF7Q9BXJ2 289 aa12.98□□□□□ -0.33
HDAC1-209ENST00000484305 NT5MQ9NPB1 228 aa12.98□□□□□ -0.33
HDAC1-209ENST00000484305 PNMA8BQ9ULN7 279 aaPredicted RBP12.98□□□□□ -0.33
HDAC1-209ENST00000484305 TFR2Q9UP52 801 aa12.98□□□□□ -0.33
HDAC1-209ENST00000484305 HYOU1Q9Y4L1 999 aa12.98□□□□□ -0.33
HDAC1-209ENST00000484305 ASPMQ8IZT6 3477 aa12.97□□□□□ -0.33
HDAC1-209ENST00000484305 FFAR2O15552 330 aa12.97□□□□□ -0.33
HDAC1-209ENST00000484305 LZTS3O60299 673 aaPredicted RBP12.97□□□□□ -0.33
HDAC1-209ENST00000484305 LCA5LO95447 670 aa12.97□□□□□ -0.33
HDAC1-209ENST00000484305 CSF2P04141 144 aa12.97□□□□□ -0.33
HDAC1-209ENST00000484305 GIMD1P0DJR0 217 aa12.97□□□□□ -0.33
HDAC1-209ENST00000484305 NME1P15531 152 aaKnown RBP12.97□□□□□ -0.33
HDAC1-209ENST00000484305 CCNCP24863 283 aa12.97□□□□□ -0.33
HDAC1-209ENST00000484305 MAGEA1P43355 309 aa12.97□□□□□ -0.33
HDAC1-209ENST00000484305 ACADVLP49748 655 aa12.97□□□□□ -0.33
HDAC1-209ENST00000484305 THOP1P52888 689 aa12.97□□□□□ -0.33
HDAC1-209ENST00000484305 HNRNPKP61978 463 aaKnown RBP eCLIP12.97□□□□□ -0.33
HDAC1-209ENST00000484305 YPEL5P62699 121 aa12.97□□□□□ -0.33
HDAC1-209ENST00000484305 TRAF2Q12933 501 aa12.97□□□□□ -0.33
HDAC1-209ENST00000484305 AGERQ15109 404 aa12.97□□□□□ -0.33
HDAC1-209ENST00000484305 IFI16Q16666 785 aaKnown RBP12.97□□□□□ -0.33
HDAC1-209ENST00000484305 ST3GAL2Q16842 350 aa12.97□□□□□ -0.33
HDAC1-209ENST00000484305 WSCD2Q2TBF2 565 aa12.97□□□□□ -0.33
HDAC1-209ENST00000484305 PROX2Q3B8N5 592 aa12.97□□□□□ -0.33
HDAC1-209ENST00000484305 DHRS13Q6UX07 377 aa12.97□□□□□ -0.33
HDAC1-209ENST00000484305 LIPIQ6XZB0 460 aa12.97□□□□□ -0.33
HDAC1-209ENST00000484305 TMPRSS7Q7RTY8 843 aa12.97□□□□□ -0.33
HDAC1-209ENST00000484305 MARCH9Q86YJ5 346 aa12.97□□□□□ -0.33
HDAC1-209ENST00000484305 OR4C6Q8NH72 309 aa12.97□□□□□ -0.33
HDAC1-209ENST00000484305 PDCD6IPQ8WUM4 868 aaKnown RBP12.97□□□□□ -0.33
HDAC1-209ENST00000484305 SPOCK2Q92563 424 aa12.97□□□□□ -0.33
HDAC1-209ENST00000484305 TSGA13Q96PP4 275 aa12.97□□□□□ -0.33
HDAC1-209ENST00000484305 DTLQ9NZJ0 730 aa12.97□□□□□ -0.33
HDAC1-209ENST00000484305 LRP4O75096 1905 aa12.97□□□□□ -0.33
HDAC1-209ENST00000484305 MYLKQ15746 1914 aa12.97□□□□□ -0.33
HDAC1-209ENST00000484305 USP24Q9UPU5 2620 aa12.96□□□□□ -0.33
HDAC1-209ENST00000484305 IGF2RP11717 2491 aa12.96□□□□□ -0.33
HDAC1-209ENST00000484305 CFAP69A5D8W1 941 aa12.96□□□□□ -0.33
HDAC1-209ENST00000484305 MATN3O15232 486 aa12.96□□□□□ -0.33
HDAC1-209ENST00000484305 SOCS5O75159 536 aa12.96□□□□□ -0.33
HDAC1-209ENST00000484305 NEBLO76041 1014 aa12.96□□□□□ -0.33
HDAC1-209ENST00000484305 RECQL5O94762 991 aaPredicted RBP12.96□□□□□ -0.33
HDAC1-209ENST00000484305 CPP00450 1065 aa12.96□□□□□ -0.33
HDAC1-209ENST00000484305 PROS1P07225 676 aa12.96□□□□□ -0.33
HDAC1-209ENST00000484305 TNNT1P13805 278 aa12.96□□□□□ -0.33
HDAC1-209ENST00000484305 JUNDP17535 347 aa12.96□□□□□ -0.33
HDAC1-209ENST00000484305 CKMT2P17540 419 aa12.96□□□□□ -0.33
HDAC1-209ENST00000484305 GM2AP17900 193 aa12.96□□□□□ -0.33
HDAC1-209ENST00000484305 COMTP21964 271 aa12.96□□□□□ -0.33
HDAC1-209ENST00000484305 ITKQ08881 620 aa12.96□□□□□ -0.33
HDAC1-209ENST00000484305 ZNF211Q13398 564 aaPredicted RBP12.96□□□□□ -0.33
HDAC1-209ENST00000484305 PTK2BQ14289 1009 aa12.96□□□□□ -0.33
HDAC1-209ENST00000484305 IHHQ14623 411 aa12.96□□□□□ -0.33
HDAC1-209ENST00000484305 INPP5AQ14642 412 aa12.96□□□□□ -0.33
HDAC1-209ENST00000484305 RALGPS1Q5JS13 557 aa12.96□□□□□ -0.33
HDAC1-209ENST00000484305 LRRC38Q5VT99 294 aa12.96□□□□□ -0.33
HDAC1-209ENST00000484305 TIGD7Q6NT04 549 aaPredicted RBP12.96□□□□□ -0.33
HDAC1-209ENST00000484305 CCNI2Q6ZMN8 369 aaPredicted RBP12.96□□□□□ -0.33
HDAC1-209ENST00000484305 DPPA4Q7L190 304 aa12.96□□□□□ -0.33
HDAC1-209ENST00000484305 CCDC170Q8IYT3 715 aa12.96□□□□□ -0.33
HDAC1-209ENST00000484305 RBFAQ8N0V3 343 aa12.96□□□□□ -0.33
HDAC1-209ENST00000484305 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 176.1 ms