RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 DCLK2Q8N568 766 aa26.4■■□□□ 1.82
SHOX2-204ENST00000483851 ISG20Q96AZ6 181 aaKnown RBP26.4■■□□□ 1.82
SHOX2-204ENST00000483851 GRAMD1AQ96CP6 724 aa26.4■■□□□ 1.82
SHOX2-204ENST00000483851 VPS39Q96JC1 886 aa26.4■■□□□ 1.82
SHOX2-204ENST00000483851 NSMCE3Q96MG7 304 aa26.4■■□□□ 1.82
SHOX2-204ENST00000483851 GPR22Q99680 433 aa26.4■■□□□ 1.82
SHOX2-204ENST00000483851 MFSD1Q9H3U5 465 aa26.4■■□□□ 1.82
SHOX2-204ENST00000483851 SLC17A7Q9P2U7 560 aa26.4■■□□□ 1.82
SHOX2-204ENST00000483851 INTS6Q9UL03 887 aaKnown RBP26.4■■□□□ 1.82
SHOX2-204ENST00000483851 CCDC78A2IDD5 438 aa26.39■■□□□ 1.82
SHOX2-204ENST00000483851 TYK2P29597 1187 aa26.39■■□□□ 1.82
SHOX2-204ENST00000483851 RMDN1Q96DB5 314 aa26.39■■□□□ 1.82
SHOX2-204ENST00000483851 PCMTD2Q9NV79 361 aa26.39■■□□□ 1.82
SHOX2-204ENST00000483851 HACD3Q9P035 362 aa26.39■■□□□ 1.82
SHOX2-204ENST00000483851 HS3ST2Q9Y278 367 aa26.39■■□□□ 1.82
SHOX2-204ENST00000483851 FCF1Q9Y324 198 aaKnown RBP26.39■■□□□ 1.82
SHOX2-204ENST00000483851 MT-CO1P00395 513 aa26.38■■□□□ 1.81
SHOX2-204ENST00000483851 HLA-FP30511 346 aa26.38■■□□□ 1.81
SHOX2-204ENST00000483851 RPL26P61254 145 aaKnown RBP26.38■■□□□ 1.81
SHOX2-204ENST00000483851 ITFG1Q8TB96 612 aa26.38■■□□□ 1.81
SHOX2-204ENST00000483851 BLOC1S5Q8TDH9 187 aa26.38■■□□□ 1.81
SHOX2-204ENST00000483851 RPL26L1Q9UNX3 145 aaKnown RBP26.38■■□□□ 1.81
SHOX2-204ENST00000483851 ARL2BPQ9Y2Y0 163 aa26.38■■□□□ 1.81
SHOX2-204ENST00000483851 ANKRD66B4E2M5 251 aa26.38■■□□□ 1.81
SHOX2-204ENST00000483851 DNAJC8O75937 253 aaPredicted RBP26.38■■□□□ 1.81
SHOX2-204ENST00000483851 SF3A3Q12874 501 aaKnown RBP eCLIP26.38■■□□□ 1.81
SHOX2-204ENST00000483851 TAF1AQ15573 450 aaPredicted RBP26.38■■□□□ 1.81
SHOX2-204ENST00000483851 DBN1Q16643 649 aa26.38■■□□□ 1.81
SHOX2-204ENST00000483851 FBXW10Q5XX13 1052 aa26.38■■□□□ 1.81
SHOX2-204ENST00000483851 LCA5Q86VQ0 697 aa26.38■■□□□ 1.81
SHOX2-204ENST00000483851 LRRC8CQ8TDW0 803 aa26.38■■□□□ 1.81
SHOX2-204ENST00000483851 GDPD5Q8WTR4 605 aa26.38■■□□□ 1.81
SHOX2-204ENST00000483851 SCG3Q8WXD2 468 aaKnown RBP26.38■■□□□ 1.81
SHOX2-204ENST00000483851 ING5Q8WYH8 240 aa26.38■■□□□ 1.81
SHOX2-204ENST00000483851 FAM111AQ96PZ2 611 aa26.38■■□□□ 1.81
SHOX2-204ENST00000483851 PLCD4Q9BRC7 762 aa26.38■■□□□ 1.81
SHOX2-204ENST00000483851 SLC13A1Q9BZW2 595 aa26.38■■□□□ 1.81
SHOX2-204ENST00000483851 SNX15Q9NRS6 342 aa26.38■■□□□ 1.81
SHOX2-204ENST00000483851 ABCF3Q9NUQ8 709 aa26.38■■□□□ 1.81
SHOX2-204ENST00000483851 FBXO5Q9UKT4 447 aa26.38■■□□□ 1.81
SHOX2-204ENST00000483851 PCDHGC4Q9Y5F7 938 aa26.38■■□□□ 1.81
SHOX2-204ENST00000483851 ANKRD36A6QL64 1941 aa26.37■■□□□ 1.81
SHOX2-204ENST00000483851 NEDD8-MDP1E9PL57 170 aa26.37■■□□□ 1.81
SHOX2-204ENST00000483851 GOLGA8TH3BQL2 631 aa26.37■■□□□ 1.81
SHOX2-204ENST00000483851 FZD6O60353 706 aa26.37■■□□□ 1.81
SHOX2-204ENST00000483851 AHSGP02765 367 aa26.37■■□□□ 1.81
SHOX2-204ENST00000483851 TYRP14679 529 aa26.37■■□□□ 1.81
SHOX2-204ENST00000483851 PRAMEP78395 509 aa26.37■■□□□ 1.81
SHOX2-204ENST00000483851 PDE1CQ14123 709 aaPredicted RBP26.37■■□□□ 1.81
SHOX2-204ENST00000483851 GALNTL6Q49A17 601 aa26.37■■□□□ 1.81
SHOX2-204ENST00000483851 TMC5Q6UXY8 1006 aa26.37■■□□□ 1.81
SHOX2-204ENST00000483851 TMEM184AQ6ZMB5 413 aa26.37■■□□□ 1.81
SHOX2-204ENST00000483851 CDHR3Q6ZTQ4 885 aa26.37■■□□□ 1.81
SHOX2-204ENST00000483851 DDX51Q8N8A6 666 aaKnown RBP eCLIP26.37■■□□□ 1.81
SHOX2-204ENST00000483851 MRPL38Q96DV4 380 aaKnown RBP26.37■■□□□ 1.81
SHOX2-204ENST00000483851 GGT7Q9UJ14 662 aa26.37■■□□□ 1.81
SHOX2-204ENST00000483851 MTO1Q9Y2Z2 717 aaKnown RBP26.37■■□□□ 1.81
SHOX2-204ENST00000483851 SOCS5O75159 536 aa26.36■■□□□ 1.81
SHOX2-204ENST00000483851 RASSF9O75901 435 aa26.36■■□□□ 1.81
SHOX2-204ENST00000483851 IGSF6O95976 241 aa26.36■■□□□ 1.81
SHOX2-204ENST00000483851 TRAF2Q12933 501 aa26.36■■□□□ 1.81
SHOX2-204ENST00000483851 ZKSCAN8Q15776 578 aaPredicted RBP26.36■■□□□ 1.81
SHOX2-204ENST00000483851 ZNF470Q6ECI4 717 aa26.36■■□□□ 1.81
SHOX2-204ENST00000483851 KIAA0907Q7Z7F0 614 aaPredicted RBP26.36■■□□□ 1.81
SHOX2-204ENST00000483851 TRIM42Q8IWZ5 723 aa26.36■■□□□ 1.81
SHOX2-204ENST00000483851 C12orf76Q8N812 135 aaPredicted RBP26.36■■□□□ 1.81
SHOX2-204ENST00000483851 CEP44Q9C0F1 390 aa26.36■■□□□ 1.81
SHOX2-204ENST00000483851 LINC00597Q9H2U6 94 aa26.36■■□□□ 1.81
SHOX2-204ENST00000483851 RPP40O75818 363 aaKnown RBP26.36■■□□□ 1.81
SHOX2-204ENST00000483851 PABPC1P11940 636 aaKnown RBP26.36■■□□□ 1.81
SHOX2-204ENST00000483851 SLC1A2P43004 574 aa26.36■■□□□ 1.81
SHOX2-204ENST00000483851 LEPRP48357 1165 aaKnown RBP26.36■■□□□ 1.81
SHOX2-204ENST00000483851 CSRP3P50461 194 aa26.36■■□□□ 1.81
SHOX2-204ENST00000483851 CBX2Q14781 532 aaPredicted RBP26.36■■□□□ 1.81
SHOX2-204ENST00000483851 SMAD1Q15797 465 aaKnown RBP26.36■■□□□ 1.81
SHOX2-204ENST00000483851 LY6G5CQ5SRR4 150 aa26.36■■□□□ 1.81
SHOX2-204ENST00000483851 RNF135Q8IUD6 432 aa26.36■■□□□ 1.81
SHOX2-204ENST00000483851 VN1R2Q8NFZ6 395 aa26.36■■□□□ 1.81
SHOX2-204ENST00000483851 GPR150Q8NGU9 434 aa26.36■■□□□ 1.81
SHOX2-204ENST00000483851 NLE1Q9NVX2 485 aaPredicted RBP26.36■■□□□ 1.81
SHOX2-204ENST00000483851 STARD13Q9Y3M8 1113 aa26.36■■□□□ 1.81
SHOX2-204ENST00000483851 C2orf81A6NN90 581 aa26.35■■□□□ 1.81
SHOX2-204ENST00000483851 GABRB3P28472 473 aa26.35■■□□□ 1.81
SHOX2-204ENST00000483851 GRIA4P48058 902 aa26.35■■□□□ 1.81
SHOX2-204ENST00000483851 CD151P48509 253 aa26.35■■□□□ 1.81
SHOX2-204ENST00000483851 DENND6AQ8IWF6 608 aa26.35■■□□□ 1.81
SHOX2-204ENST00000483851 LPCAT1Q8NF37 534 aa26.35■■□□□ 1.81
SHOX2-204ENST00000483851 ZNF75CPQ92670 426 aaPredicted RBP26.35■■□□□ 1.81
SHOX2-204ENST00000483851 HDAC10Q969S8 669 aa26.35■■□□□ 1.81
SHOX2-204ENST00000483851 C19orf43Q9BQ61 176 aa26.35■■□□□ 1.81
SHOX2-204ENST00000483851 OBP2AQ9NY56 170 aa26.35■■□□□ 1.81
SHOX2-204ENST00000483851 SLC25A13Q9UJS0 675 aa26.35■■□□□ 1.81
SHOX2-204ENST00000483851 K7ERQ8 282 aa26.34■■□□□ 1.81
SHOX2-204ENST00000483851 BIRC5O15392 142 aa26.34■■□□□ 1.81
SHOX2-204ENST00000483851 SMAD6O43541 496 aaKnown RBP26.34■■□□□ 1.81
SHOX2-204ENST00000483851 PDHA1P08559 390 aa26.34■■□□□ 1.81
SHOX2-204ENST00000483851 SERPINB4P48594 390 aa26.34■■□□□ 1.81
SHOX2-204ENST00000483851 SNRPD1P62314 119 aaKnown RBP26.34■■□□□ 1.81
SHOX2-204ENST00000483851 CTBP1Q13363 440 aa26.34■■□□□ 1.81
SHOX2-204ENST00000483851 FUT11Q495W5 492 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms