RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 ZNF830Q96NB3 372 aaPredicted RBP13.98□□□□□ -0.17
VARS-225ENST00000482996 MGME1Q9BQP7 344 aa13.98□□□□□ -0.17
VARS-225ENST00000482996 LUC7LQ9NQ29 371 aaKnown RBP13.98□□□□□ -0.17
VARS-225ENST00000482996 PCDHGA1Q9Y5H4 931 aa13.98□□□□□ -0.17
VARS-225ENST00000482996 AKAP13Q12802 2813 aa13.98□□□□□ -0.17
VARS-225ENST00000482996 GOLGA4Q13439 2230 aaKnown RBP13.98□□□□□ -0.17
VARS-225ENST00000482996 KNTC1P50748 2209 aa13.97□□□□□ -0.17
VARS-225ENST00000482996 LRRD1A4D1F6 860 aa13.97□□□□□ -0.17
VARS-225ENST00000482996 FAM221BA6H8Z2 402 aa13.97□□□□□ -0.17
VARS-225ENST00000482996 NEMP2A6NFY4 417 aa13.97□□□□□ -0.17
VARS-225ENST00000482996 TRAFD1O14545 582 aaPredicted RBP13.97□□□□□ -0.17
VARS-225ENST00000482996 NEBLO76041 1014 aa13.97□□□□□ -0.17
VARS-225ENST00000482996 PRKCGP05129 697 aa13.97□□□□□ -0.17
VARS-225ENST00000482996 PROS1P07225 676 aa13.97□□□□□ -0.17
VARS-225ENST00000482996 C1SP09871 688 aa13.97□□□□□ -0.17
VARS-225ENST00000482996 ELFN1P0C7U0 828 aa13.97□□□□□ -0.17
VARS-225ENST00000482996 NME1P15531 152 aaKnown RBP13.97□□□□□ -0.17
VARS-225ENST00000482996 CR2P20023 1033 aa13.97□□□□□ -0.17
VARS-225ENST00000482996 KDELR1P24390 212 aa13.97□□□□□ -0.17
VARS-225ENST00000482996 CYLC1P35663 651 aaPredicted RBP13.97□□□□□ -0.17
VARS-225ENST00000482996 IGFALSP35858 605 aa13.97□□□□□ -0.17
VARS-225ENST00000482996 SLC1A1P43005 524 aa13.97□□□□□ -0.17
VARS-225ENST00000482996 MAGEA1P43355 309 aa13.97□□□□□ -0.17
VARS-225ENST00000482996 ZNF75DP51815 510 aa13.97□□□□□ -0.17
VARS-225ENST00000482996 ZNF211Q13398 564 aaPredicted RBP13.97□□□□□ -0.17
VARS-225ENST00000482996 TCEAL1Q15170 157 aa13.97□□□□□ -0.17
VARS-225ENST00000482996 IRF4Q15306 451 aa13.97□□□□□ -0.17
VARS-225ENST00000482996 SPA17Q15506 151 aa13.97□□□□□ -0.17
VARS-225ENST00000482996 ST3GAL2Q16842 350 aa13.97□□□□□ -0.17
VARS-225ENST00000482996 ZNF542PQ5EBM4 170 aa13.97□□□□□ -0.17
VARS-225ENST00000482996 LRRC38Q5VT99 294 aa13.97□□□□□ -0.17
VARS-225ENST00000482996 CCDC170Q8IYT3 715 aa13.97□□□□□ -0.17
VARS-225ENST00000482996 GALNT15Q8N3T1 639 aa13.97□□□□□ -0.17
VARS-225ENST00000482996 SLC25A45Q8N413 288 aa13.97□□□□□ -0.17
VARS-225ENST00000482996 TP53I13Q8NBR0 393 aaPredicted RBP13.97□□□□□ -0.17
VARS-225ENST00000482996 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.97□□□□□ -0.17
VARS-225ENST00000482996 PDCD6IPQ8WUM4 868 aaKnown RBP13.97□□□□□ -0.17
VARS-225ENST00000482996 RAPGEF5Q92565 580 aa13.97□□□□□ -0.17
VARS-225ENST00000482996 MRFAP1L1Q96HT8 127 aa13.97□□□□□ -0.17
VARS-225ENST00000482996 MAK16Q9BXY0 300 aaKnown RBP13.97□□□□□ -0.17
VARS-225ENST00000482996 RBSNQ9H1K0 784 aa13.97□□□□□ -0.17
VARS-225ENST00000482996 NOD2Q9HC29 1040 aa13.97□□□□□ -0.17
VARS-225ENST00000482996 NT5MQ9NPB1 228 aa13.97□□□□□ -0.17
VARS-225ENST00000482996 COQ6Q9Y2Z9 468 aa13.97□□□□□ -0.17
VARS-225ENST00000482996 COL5A1P20908 1838 aaPredicted RBP13.97□□□□□ -0.17
VARS-225ENST00000482996 TTC24A2A3L6 582 aaPredicted RBP13.96□□□□□ -0.17
VARS-225ENST00000482996 TMEM8BA6NDV4 472 aa13.96□□□□□ -0.17
VARS-225ENST00000482996 ZNF487B1APH4 448 aa13.96□□□□□ -0.17
VARS-225ENST00000482996 MATN3O15232 486 aa13.96□□□□□ -0.17
VARS-225ENST00000482996 HTRA2O43464 458 aaPredicted RBP13.96□□□□□ -0.17
VARS-225ENST00000482996 SPOPO43791 374 aa13.96□□□□□ -0.17
VARS-225ENST00000482996 RFPL3O75679 317 aa13.96□□□□□ -0.17
VARS-225ENST00000482996 CPP00450 1065 aa13.96□□□□□ -0.17
VARS-225ENST00000482996 CSF2P04141 144 aa13.96□□□□□ -0.17
VARS-225ENST00000482996 JUNDP17535 347 aa13.96□□□□□ -0.17
VARS-225ENST00000482996 CKMT2P17540 419 aa13.96□□□□□ -0.17
VARS-225ENST00000482996 CCNCP24863 283 aa13.96□□□□□ -0.17
VARS-225ENST00000482996 NOP2P46087 812 aaKnown RBP13.96□□□□□ -0.17
VARS-225ENST00000482996 MAXP61244 160 aa13.96□□□□□ -0.17
VARS-225ENST00000482996 SEMG2Q02383 582 aa13.96□□□□□ -0.17
VARS-225ENST00000482996 ITKQ08881 620 aa13.96□□□□□ -0.17
VARS-225ENST00000482996 DNAJC3Q13217 504 aa13.96□□□□□ -0.17
VARS-225ENST00000482996 AGERQ15109 404 aa13.96□□□□□ -0.17
VARS-225ENST00000482996 WSCD2Q2TBF2 565 aa13.96□□□□□ -0.17
VARS-225ENST00000482996 DPPA4Q7L190 304 aa13.96□□□□□ -0.17
VARS-225ENST00000482996 VSIG1Q86XK7 387 aa13.96□□□□□ -0.17
VARS-225ENST00000482996 RHOT1Q8IXI2 618 aa13.96□□□□□ -0.17
VARS-225ENST00000482996 PGBD5Q8N414 524 aa13.96□□□□□ -0.17
VARS-225ENST00000482996 TEX26Q8N6G2 289 aa13.96□□□□□ -0.17
VARS-225ENST00000482996 PQLC3Q8N755 202 aa13.96□□□□□ -0.17
VARS-225ENST00000482996 OR4C6Q8NH72 309 aa13.96□□□□□ -0.17
VARS-225ENST00000482996 BTN2A2Q8WVV5 523 aa13.96□□□□□ -0.17
VARS-225ENST00000482996 SPOCK2Q92563 424 aa13.96□□□□□ -0.17
VARS-225ENST00000482996 GATA6Q92908 595 aa13.96□□□□□ -0.17
VARS-225ENST00000482996 FATE1Q969F0 183 aa13.96□□□□□ -0.17
VARS-225ENST00000482996 TSGA13Q96PP4 275 aa13.96□□□□□ -0.17
VARS-225ENST00000482996 RNF157Q96PX1 679 aa13.96□□□□□ -0.17
VARS-225ENST00000482996 DUSP23Q9BVJ7 150 aa13.96□□□□□ -0.17
VARS-225ENST00000482996 POLR1EQ9GZS1 481 aaKnown RBP13.96□□□□□ -0.17
VARS-225ENST00000482996 MBNL1Q9NR56 388 aaKnown RBP13.96□□□□□ -0.17
VARS-225ENST00000482996 UCKL1Q9NWZ5 548 aa13.96□□□□□ -0.17
VARS-225ENST00000482996 DDX56Q9NY93 547 aaKnown RBP13.96□□□□□ -0.17
VARS-225ENST00000482996 AMACRQ9UHK6 382 aa13.96□□□□□ -0.17
VARS-225ENST00000482996 PHTF1Q9UMS5 762 aa13.96□□□□□ -0.17
VARS-225ENST00000482996 PCDHGC4Q9Y5F7 938 aa13.96□□□□□ -0.17
VARS-225ENST00000482996 USP24Q9UPU5 2620 aa13.96□□□□□ -0.17
VARS-225ENST00000482996 TDRD6O60522 2096 aaKnown RBP13.95□□□□□ -0.18
VARS-225ENST00000482996 SHROOM3Q8TF72 1996 aa13.95□□□□□ -0.18
VARS-225ENST00000482996 C1QTNF9BB2RNN3 333 aa13.95□□□□□ -0.18
VARS-225ENST00000482996 TRIM38O00635 465 aa13.95□□□□□ -0.18
VARS-225ENST00000482996 SCAMP1O15126 338 aa13.95□□□□□ -0.18
VARS-225ENST00000482996 FFAR2O15552 330 aa13.95□□□□□ -0.18
VARS-225ENST00000482996 SIGLEC6O43699 453 aa13.95□□□□□ -0.18
VARS-225ENST00000482996 MAP3K6O95382 1288 aa13.95□□□□□ -0.18
VARS-225ENST00000482996 KRT1P04264 644 aa13.95□□□□□ -0.18
VARS-225ENST00000482996 C1QTNF9P0C862 333 aa13.95□□□□□ -0.18
VARS-225ENST00000482996 CYP2A6P11509 494 aaPredicted RBP13.95□□□□□ -0.18
VARS-225ENST00000482996 KRT10P13645 584 aa13.95□□□□□ -0.18
VARS-225ENST00000482996 TNNT1P13805 278 aa13.95□□□□□ -0.18
VARS-225ENST00000482996 ZFXP17010 805 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms