RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 GJB4Q9NTQ9 266 aa6.83□□□□□ -1.32
CLK1-212ENST00000482590 MARCH5Q9NX47 278 aa6.83□□□□□ -1.32
CLK1-212ENST00000482590 WRAP73Q9P2S5 460 aaPredicted RBP6.83□□□□□ -1.32
CLK1-212ENST00000482590 GTF3C4Q9UKN8 822 aa6.83□□□□□ -1.32
CLK1-212ENST00000482590 DUSP12Q9UNI6 340 aa6.83□□□□□ -1.32
CLK1-212ENST00000482590 CFAP20Q9Y6A4 193 aaKnown RBP6.83□□□□□ -1.32
CLK1-212ENST00000482590 PTPRZ1P23471 2315 aaPredicted RBP6.83□□□□□ -1.32
CLK1-212ENST00000482590 ZMYM2Q9UBW7 1377 aa6.82□□□□□ -1.32
CLK1-212ENST00000482590 NUP210Q8TEM1 1887 aaPredicted RBP6.82□□□□□ -1.32
CLK1-212ENST00000482590 ARL5CA6NH57 179 aa6.82□□□□□ -1.32
CLK1-212ENST00000482590 TSPAN1O60635 241 aa6.82□□□□□ -1.32
CLK1-212ENST00000482590 PGM3O95394 542 aa6.82□□□□□ -1.32
CLK1-212ENST00000482590 MLYCDO95822 493 aa6.82□□□□□ -1.32
CLK1-212ENST00000482590 KRT10P13645 584 aa6.82□□□□□ -1.32
CLK1-212ENST00000482590 BRAFP15056 766 aa6.82□□□□□ -1.32
CLK1-212ENST00000482590 AOC1P19801 751 aa6.82□□□□□ -1.32
CLK1-212ENST00000482590 SLC7A1P30825 629 aa6.82□□□□□ -1.32
CLK1-212ENST00000482590 ALDH3A2P51648 485 aa6.82□□□□□ -1.32
CLK1-212ENST00000482590 CLCN5P51795 746 aa6.82□□□□□ -1.32
CLK1-212ENST00000482590 LIMK1P53667 647 aa6.82□□□□□ -1.32
CLK1-212ENST00000482590 PTENP60484 403 aa6.82□□□□□ -1.32
CLK1-212ENST00000482590 ADAM8P78325 824 aa6.82□□□□□ -1.32
CLK1-212ENST00000482590 PPARDQ03181 441 aa6.82□□□□□ -1.32
CLK1-212ENST00000482590 AP1B1Q10567 949 aa6.82□□□□□ -1.32
CLK1-212ENST00000482590 GRIK3Q13003 919 aa6.82□□□□□ -1.32
CLK1-212ENST00000482590 CAPSQ13938 189 aa6.82□□□□□ -1.32
CLK1-212ENST00000482590 ANKRD1Q15327 319 aa6.82□□□□□ -1.32
CLK1-212ENST00000482590 CALCRLQ16602 461 aa6.82□□□□□ -1.32
CLK1-212ENST00000482590 CCDC157Q569K6 752 aa6.82□□□□□ -1.32
CLK1-212ENST00000482590 FUT10Q6P4F1 479 aa6.82□□□□□ -1.32
CLK1-212ENST00000482590 ALKBH5Q6P6C2 394 aaKnown RBP6.82□□□□□ -1.32
CLK1-212ENST00000482590 BEND5Q7L4P6 421 aa6.82□□□□□ -1.32
CLK1-212ENST00000482590 CMASQ8NFW8 434 aaPredicted RBP6.82□□□□□ -1.32
CLK1-212ENST00000482590 SPATA18Q8TC71 538 aa6.82□□□□□ -1.32
CLK1-212ENST00000482590 STYXQ8WUJ0 223 aa6.82□□□□□ -1.32
CLK1-212ENST00000482590 HAS1Q92839 578 aa6.82□□□□□ -1.32
CLK1-212ENST00000482590 SLC7A6OSQ96CW6 309 aaPredicted RBP6.82□□□□□ -1.32
CLK1-212ENST00000482590 GAD1Q99259 594 aa6.82□□□□□ -1.32
CLK1-212ENST00000482590 KCTD10Q9H3F6 313 aa6.82□□□□□ -1.32
CLK1-212ENST00000482590 EPS8L2Q9H6S3 715 aa6.82□□□□□ -1.32
CLK1-212ENST00000482590 TMEM8AQ9HCN3 771 aa6.82□□□□□ -1.32
CLK1-212ENST00000482590 XPNPEP1Q9NQW7 623 aa6.82□□□□□ -1.32
CLK1-212ENST00000482590 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.82□□□□□ -1.32
CLK1-212ENST00000482590 HPF1Q9NWY4 346 aa6.82□□□□□ -1.32
CLK1-212ENST00000482590 RGL1Q9NZL6 768 aa6.82□□□□□ -1.32
CLK1-212ENST00000482590 IGSF9Q9P2J2 1179 aa6.82□□□□□ -1.32
CLK1-212ENST00000482590 MAGEL2Q9UJ55 1249 aa6.82□□□□□ -1.32
CLK1-212ENST00000482590 GVINP1Q7Z2Y8 2422 aa6.82□□□□□ -1.32
CLK1-212ENST00000482590 RALGAPA1Q6GYQ0 2036 aa6.82□□□□□ -1.32
CLK1-212ENST00000482590 NOTCH4Q99466 2003 aa6.82□□□□□ -1.32
CLK1-212ENST00000482590 KIF26AQ9ULI4 1882 aaPredicted RBP6.81□□□□□ -1.32
CLK1-212ENST00000482590 CACNA1IQ9P0X4 2223 aa6.81□□□□□ -1.32
CLK1-212ENST00000482590 ZNF292O60281 2723 aa6.81□□□□□ -1.32
CLK1-212ENST00000482590 CCDC195A0A1B0GUA6 201 aa6.81□□□□□ -1.32
CLK1-212ENST00000482590 A0A1W2PPL8 197 aa6.81□□□□□ -1.32
CLK1-212ENST00000482590 C2orf78A6NCI8 922 aa6.81□□□□□ -1.32
CLK1-212ENST00000482590 PRR23AA6NEV1 266 aa6.81□□□□□ -1.32
CLK1-212ENST00000482590 LRRIQ4A6NIV6 560 aa6.81□□□□□ -1.32
CLK1-212ENST00000482590 TMEM110-MUSTN1A8MSY1 372 aa6.81□□□□□ -1.32
CLK1-212ENST00000482590 PROB1E7EW31 1015 aa6.81□□□□□ -1.32
CLK1-212ENST00000482590 TEX28O15482 410 aa6.81□□□□□ -1.32
CLK1-212ENST00000482590 NEMFO60524 1076 aa6.81□□□□□ -1.32
CLK1-212ENST00000482590 PFKFB2O60825 505 aa6.81□□□□□ -1.32
CLK1-212ENST00000482590 ERAL1O75616 437 aaKnown RBP6.81□□□□□ -1.32
CLK1-212ENST00000482590 CLEC2LP0C7M8 214 aa6.81□□□□□ -1.32
CLK1-212ENST00000482590 ACADMP11310 421 aa6.81□□□□□ -1.32
CLK1-212ENST00000482590 ARF4P18085 180 aaPredicted RBP6.81□□□□□ -1.32
CLK1-212ENST00000482590 HOXA11P31270 313 aaPredicted RBP6.81□□□□□ -1.32
CLK1-212ENST00000482590 NBL1P41271 181 aa6.81□□□□□ -1.32
CLK1-212ENST00000482590 RARRES1P49788 294 aa6.81□□□□□ -1.32
CLK1-212ENST00000482590 CCR9P51686 369 aa6.81□□□□□ -1.32
CLK1-212ENST00000482590 CSE1LP55060 971 aaKnown RBP6.81□□□□□ -1.32
CLK1-212ENST00000482590 NKX6-1P78426 367 aaPredicted RBP6.81□□□□□ -1.32
CLK1-212ENST00000482590 MBTD1Q05BQ5 628 aa6.81□□□□□ -1.32
CLK1-212ENST00000482590 USP41Q3LFD5 358 aa6.81□□□□□ -1.32
CLK1-212ENST00000482590 CTXN3Q4LDR2 81 aa6.81□□□□□ -1.32
CLK1-212ENST00000482590 PITRM1Q5JRX3 1037 aa6.81□□□□□ -1.32
CLK1-212ENST00000482590 LIN9Q5TKA1 542 aa6.81□□□□□ -1.32
CLK1-212ENST00000482590 LAIR1Q6GTX8 287 aa6.81□□□□□ -1.32
CLK1-212ENST00000482590 SLC27A1Q6PCB7 646 aa6.81□□□□□ -1.32
CLK1-212ENST00000482590 BBS12Q6ZW61 710 aa6.81□□□□□ -1.32
CLK1-212ENST00000482590 GAREM2Q75VX8 874 aa6.81□□□□□ -1.32
CLK1-212ENST00000482590 GALNT7Q86SF2 657 aa6.81□□□□□ -1.32
CLK1-212ENST00000482590 SLC9B2Q86UD5 537 aa6.81□□□□□ -1.32
CLK1-212ENST00000482590 CDR2LQ86X02 465 aaPredicted RBP6.81□□□□□ -1.32
CLK1-212ENST00000482590 ZBTB8OSQ8IWT0 167 aa6.81□□□□□ -1.32
CLK1-212ENST00000482590 UNC45BQ8IWX7 931 aa6.81□□□□□ -1.32
CLK1-212ENST00000482590 RNF168Q8IYW5 571 aaPredicted RBP6.81□□□□□ -1.32
CLK1-212ENST00000482590 NUP93Q8N1F7 819 aa6.81□□□□□ -1.32
CLK1-212ENST00000482590 THAP4Q8WY91 577 aa6.81□□□□□ -1.32
CLK1-212ENST00000482590 SMG7Q92540 1137 aaKnown RBP6.81□□□□□ -1.32
CLK1-212ENST00000482590 TAF4BQ92750 862 aa6.81□□□□□ -1.32
CLK1-212ENST00000482590 NKD2Q969F2 451 aaPredicted RBP6.81□□□□□ -1.32
CLK1-212ENST00000482590 FEM1CQ96JP0 617 aa6.81□□□□□ -1.32
CLK1-212ENST00000482590 RPL10LQ96L21 214 aaKnown RBP6.81□□□□□ -1.32
CLK1-212ENST00000482590 C7orf25Q9BPX7 421 aa6.81□□□□□ -1.32
CLK1-212ENST00000482590 RTP3Q9BQQ7 232 aa6.81□□□□□ -1.32
CLK1-212ENST00000482590 POLR3FQ9H1D9 316 aaPredicted RBP6.81□□□□□ -1.32
CLK1-212ENST00000482590 NXF3Q9H4D5 531 aaKnown RBP6.81□□□□□ -1.32
CLK1-212ENST00000482590 PLEKHA4Q9H4M7 779 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms