RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 PSTKQ8IV42 348 aaKnown RBP10.55□□□□□ -0.72
CPSF4-212ENST00000482251 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.55□□□□□ -0.72
CPSF4-212ENST00000482251 PDCD7Q8N8D1 485 aaKnown RBP10.55□□□□□ -0.72
CPSF4-212ENST00000482251 RNF214Q8ND24 703 aa10.55□□□□□ -0.72
CPSF4-212ENST00000482251 FAM174AQ8TBP5 190 aa10.55□□□□□ -0.72
CPSF4-212ENST00000482251 PDCD6IPQ8WUM4 868 aaKnown RBP10.55□□□□□ -0.72
CPSF4-212ENST00000482251 ASB12Q8WXK4 309 aa10.55□□□□□ -0.72
CPSF4-212ENST00000482251 NXPE2Q96DL1 559 aa10.55□□□□□ -0.72
CPSF4-212ENST00000482251 IFT43Q96FT9 208 aa10.55□□□□□ -0.72
CPSF4-212ENST00000482251 ZNF641Q96N77 438 aaPredicted RBP10.55□□□□□ -0.72
CPSF4-212ENST00000482251 TUBGCP5Q96RT8 1024 aa10.55□□□□□ -0.72
CPSF4-212ENST00000482251 LRRC61Q9BV99 259 aa10.55□□□□□ -0.72
CPSF4-212ENST00000482251 SEPT3Q9UH03 358 aa10.55□□□□□ -0.72
CPSF4-212ENST00000482251 IP6K2Q9UHH9 426 aa10.55□□□□□ -0.72
CPSF4-212ENST00000482251 LHX6Q9UPM6 363 aa10.55□□□□□ -0.72
CPSF4-212ENST00000482251 CLCA2Q9UQC9 943 aa10.55□□□□□ -0.72
CPSF4-212ENST00000482251 PCDHB1Q9Y5F3 818 aa10.55□□□□□ -0.72
CPSF4-212ENST00000482251 U3KQA8 63 aa10.55□□□□□ -0.72
CPSF4-212ENST00000482251 APC2O95996 2303 aa10.55□□□□□ -0.72
CPSF4-212ENST00000482251 LRP4O75096 1905 aa10.54□□□□□ -0.72
CPSF4-212ENST00000482251 CPED1A4D0V7 1026 aa10.54□□□□□ -0.72
CPSF4-212ENST00000482251 NEMP2A6NFY4 417 aa10.54□□□□□ -0.72
CPSF4-212ENST00000482251 TMEM110-MUSTN1A8MSY1 372 aa10.54□□□□□ -0.72
CPSF4-212ENST00000482251 GCATO75600 419 aa10.54□□□□□ -0.72
CPSF4-212ENST00000482251 TPM3P06753 285 aa10.54□□□□□ -0.72
CPSF4-212ENST00000482251 ELFN1P0C7U0 828 aa10.54□□□□□ -0.72
CPSF4-212ENST00000482251 CKMT1AP12532 417 aa10.54□□□□□ -0.72
CPSF4-212ENST00000482251 HCAR3P49019 387 aa10.54□□□□□ -0.72
CPSF4-212ENST00000482251 ILKQ13418 452 aa10.54□□□□□ -0.72
CPSF4-212ENST00000482251 PTK2BQ14289 1009 aa10.54□□□□□ -0.72
CPSF4-212ENST00000482251 GRM3Q14832 879 aa10.54□□□□□ -0.72
CPSF4-212ENST00000482251 ACAP1Q15027 740 aa10.54□□□□□ -0.72
CPSF4-212ENST00000482251 COL28A1Q2UY09 1125 aa10.54□□□□□ -0.72
CPSF4-212ENST00000482251 FAXCQ5TGI0 409 aa10.54□□□□□ -0.72
CPSF4-212ENST00000482251 DENND2CQ68D51 928 aa10.54□□□□□ -0.72
CPSF4-212ENST00000482251 KCTD16Q68DU8 428 aa10.54□□□□□ -0.72
CPSF4-212ENST00000482251 GUSBP11Q6P575 273 aa10.54□□□□□ -0.72
CPSF4-212ENST00000482251 HID1Q8IV36 788 aa10.54□□□□□ -0.72
CPSF4-212ENST00000482251 PGBD5Q8N414 524 aa10.54□□□□□ -0.72
CPSF4-212ENST00000482251 NIPA2Q8N8Q9 360 aa10.54□□□□□ -0.72
CPSF4-212ENST00000482251 PLA2G15Q8NCC3 412 aa10.54□□□□□ -0.72
CPSF4-212ENST00000482251 IFI44Q8TCB0 444 aa10.54□□□□□ -0.72
CPSF4-212ENST00000482251 LRRN4Q8WUT4 740 aa10.54□□□□□ -0.72
CPSF4-212ENST00000482251 HNRNPLLQ8WVV9 542 aaKnown RBP10.54□□□□□ -0.72
CPSF4-212ENST00000482251 TEKT4Q8WW24 435 aa10.54□□□□□ -0.72
CPSF4-212ENST00000482251 TSACCQ96A04 125 aaPredicted RBP10.54□□□□□ -0.72
CPSF4-212ENST00000482251 PDXPQ96GD0 296 aa10.54□□□□□ -0.72
CPSF4-212ENST00000482251 IL12RB2Q99665 862 aa10.54□□□□□ -0.72
CPSF4-212ENST00000482251 SYNDIG1Q9H7V2 258 aa10.54□□□□□ -0.72
CPSF4-212ENST00000482251 SIRPGQ9P1W8 387 aa10.54□□□□□ -0.72
CPSF4-212ENST00000482251 CTTNBP2NLQ9P2B4 639 aa10.54□□□□□ -0.72
CPSF4-212ENST00000482251 GPSM3Q9Y4H4 160 aa10.54□□□□□ -0.72
CPSF4-212ENST00000482251 PCDHGC4Q9Y5F7 938 aa10.54□□□□□ -0.72
CPSF4-212ENST00000482251 AK5Q9Y6K8 562 aa10.54□□□□□ -0.72
CPSF4-212ENST00000482251 LAMA5O15230 3695 aa10.53□□□□□ -0.72
CPSF4-212ENST00000482251 MYO1FO00160 1098 aa10.53□□□□□ -0.72
CPSF4-212ENST00000482251 CASC3O15234 703 aaKnown RBP10.53□□□□□ -0.72
CPSF4-212ENST00000482251 MAFKO60675 156 aa10.53□□□□□ -0.72
CPSF4-212ENST00000482251 RECQL5O94762 991 aaPredicted RBP10.53□□□□□ -0.72
CPSF4-212ENST00000482251 PEX11BO96011 259 aa10.53□□□□□ -0.72
CPSF4-212ENST00000482251 MT-CO3P00414 261 aa10.53□□□□□ -0.72
CPSF4-212ENST00000482251 CPP00450 1065 aa10.53□□□□□ -0.72
CPSF4-212ENST00000482251 CDK4P11802 303 aa10.53□□□□□ -0.72
CPSF4-212ENST00000482251 TSHRP16473 764 aa10.53□□□□□ -0.72
CPSF4-212ENST00000482251 PTMSP20962 102 aa10.53□□□□□ -0.72
CPSF4-212ENST00000482251 SERPINB6P35237 376 aa10.53□□□□□ -0.72
CPSF4-212ENST00000482251 CSNK1DP48730 415 aa10.53□□□□□ -0.72
CPSF4-212ENST00000482251 ZNF135P52742 658 aaPredicted RBP10.53□□□□□ -0.72
CPSF4-212ENST00000482251 ADKP55263 362 aaKnown RBP10.53□□□□□ -0.72
CPSF4-212ENST00000482251 TAS2R40P59535 323 aa10.53□□□□□ -0.72
CPSF4-212ENST00000482251 AP1S1P61966 158 aa10.53□□□□□ -0.72
CPSF4-212ENST00000482251 PPARDQ03181 441 aa10.53□□□□□ -0.72
CPSF4-212ENST00000482251 INPP5AQ14642 412 aa10.53□□□□□ -0.72
CPSF4-212ENST00000482251 RFTN1Q14699 578 aaPredicted RBP10.53□□□□□ -0.72
CPSF4-212ENST00000482251 PTPRRQ15256 657 aa10.53□□□□□ -0.72
CPSF4-212ENST00000482251 ALG11Q2TAA5 492 aa10.53□□□□□ -0.72
CPSF4-212ENST00000482251 ATP13A4Q4VNC1 1196 aa10.53□□□□□ -0.72
CPSF4-212ENST00000482251 BOLA3Q53S33 107 aa10.53□□□□□ -0.72
CPSF4-212ENST00000482251 ZFYVE27Q5T4F4 411 aa10.53□□□□□ -0.72
CPSF4-212ENST00000482251 ZCCHC8Q6NZY4 707 aaKnown RBP10.53□□□□□ -0.72
CPSF4-212ENST00000482251 ENPP7Q6UWV6 458 aa10.53□□□□□ -0.72
CPSF4-212ENST00000482251 EFL1Q7Z2Z2 1120 aaKnown RBP10.53□□□□□ -0.72
CPSF4-212ENST00000482251 LZTR1Q8N653 840 aa10.53□□□□□ -0.72
CPSF4-212ENST00000482251 PCDH19Q8TAB3 1148 aa10.53□□□□□ -0.72
CPSF4-212ENST00000482251 MAPK15Q8TD08 544 aa10.53□□□□□ -0.72
CPSF4-212ENST00000482251 ECHDC3Q96DC8 303 aa10.53□□□□□ -0.72
CPSF4-212ENST00000482251 IQCDQ96DY2 449 aa10.53□□□□□ -0.72
CPSF4-212ENST00000482251 CRELD1Q96HD1 420 aa10.53□□□□□ -0.72
CPSF4-212ENST00000482251 PSKH2Q96QS6 385 aa10.53□□□□□ -0.72
CPSF4-212ENST00000482251 DUSP23Q9BVJ7 150 aa10.53□□□□□ -0.72
CPSF4-212ENST00000482251 SLC13A1Q9BZW2 595 aa10.53□□□□□ -0.72
CPSF4-212ENST00000482251 CLPBQ9H078 707 aa10.53□□□□□ -0.72
CPSF4-212ENST00000482251 DEF6Q9H4E7 631 aa10.53□□□□□ -0.72
CPSF4-212ENST00000482251 SUDS3Q9H7L9 328 aaPredicted RBP10.53□□□□□ -0.72
CPSF4-212ENST00000482251 NOD2Q9HC29 1040 aa10.53□□□□□ -0.72
CPSF4-212ENST00000482251 SCUBE2Q9NQ36 999 aa10.53□□□□□ -0.72
CPSF4-212ENST00000482251 SPASTQ9UBP0 616 aa10.53□□□□□ -0.72
CPSF4-212ENST00000482251 B4GALT6Q9UBX8 382 aa10.53□□□□□ -0.72
CPSF4-212ENST00000482251 KLQ9UEF7 1012 aa10.53□□□□□ -0.72
CPSF4-212ENST00000482251 NENFQ9UMX5 172 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms