RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 NKD1Q969G9 470 aa17.5■□□□□ 0.39
RXRB-203ENST00000481441 WDR92Q96MX6 357 aa17.5■□□□□ 0.39
RXRB-203ENST00000481441 GDAP1L1Q96MZ0 367 aa17.5■□□□□ 0.39
RXRB-203ENST00000481441 MAGEH1Q9H213 219 aa17.5■□□□□ 0.39
RXRB-203ENST00000481441 CTNND2Q9UQB3 1225 aa17.5■□□□□ 0.39
RXRB-203ENST00000481441 USP9XQ93008 2570 aaPredicted RBP17.5■□□□□ 0.39
RXRB-203ENST00000481441 NUDT21O43809 227 aaKnown RBP17.49■□□□□ 0.39
RXRB-203ENST00000481441 TNFP01375 233 aa17.49■□□□□ 0.39
RXRB-203ENST00000481441 RHOQP17081 205 aa17.49■□□□□ 0.39
RXRB-203ENST00000481441 CDH5P33151 784 aaPredicted RBP17.49■□□□□ 0.39
RXRB-203ENST00000481441 MAPKAPK2P49137 400 aa17.49■□□□□ 0.39
RXRB-203ENST00000481441 STX17P56962 302 aa17.49■□□□□ 0.39
RXRB-203ENST00000481441 B4GALNT1Q00973 533 aa17.49■□□□□ 0.39
RXRB-203ENST00000481441 NRG1Q02297 640 aaPredicted RBP17.49■□□□□ 0.39
RXRB-203ENST00000481441 HLTFQ14527 1009 aaKnown RBP eCLIP17.49■□□□□ 0.39
RXRB-203ENST00000481441 AGERQ15109 404 aa17.49■□□□□ 0.39
RXRB-203ENST00000481441 XYLT1Q86Y38 959 aa17.49■□□□□ 0.39
RXRB-203ENST00000481441 FAM46DQ8NEK8 389 aa17.49■□□□□ 0.39
RXRB-203ENST00000481441 ATL2Q8NHH9 583 aa17.49■□□□□ 0.39
RXRB-203ENST00000481441 OR1E3Q8WZA6 343 aa17.49■□□□□ 0.39
RXRB-203ENST00000481441 C18orf8Q96DM3 657 aa17.49■□□□□ 0.39
RXRB-203ENST00000481441 CFAP57Q96MR6 1250 aa17.49■□□□□ 0.39
RXRB-203ENST00000481441 TIGD1Q96MW7 591 aa17.49■□□□□ 0.39
RXRB-203ENST00000481441 PSMG3-AS1Q96PY0 264 aa17.49■□□□□ 0.39
RXRB-203ENST00000481441 TTYH3Q9C0H2 523 aa17.49■□□□□ 0.39
RXRB-203ENST00000481441 TMEM248Q9NWD8 314 aa17.49■□□□□ 0.39
RXRB-203ENST00000481441 DNAI1Q9UI46 699 aa17.49■□□□□ 0.39
RXRB-203ENST00000481441 HOOK1Q9UJC3 728 aaKnown RBP17.49■□□□□ 0.39
RXRB-203ENST00000481441 ANAPC2Q9UJX6 822 aa17.49■□□□□ 0.39
RXRB-203ENST00000481441 AJAP1Q9UKB5 411 aaPredicted RBP17.49■□□□□ 0.39
RXRB-203ENST00000481441 MFHAS1Q9Y4C4 1052 aa17.49■□□□□ 0.39
RXRB-203ENST00000481441 NOTCH2Q04721 2471 aa17.49■□□□□ 0.39
RXRB-203ENST00000481441 SPTBN1Q01082 2364 aaKnown RBP17.49■□□□□ 0.39
RXRB-203ENST00000481441 FOXN3O00409 490 aaPredicted RBP17.48■□□□□ 0.39
RXRB-203ENST00000481441 TMCC1O94876 653 aa17.48■□□□□ 0.39
RXRB-203ENST00000481441 ATP1A2P50993 1020 aa17.48■□□□□ 0.39
RXRB-203ENST00000481441 SUOXP51687 545 aa17.48■□□□□ 0.39
RXRB-203ENST00000481441 RAD51Q06609 339 aa17.48■□□□□ 0.39
RXRB-203ENST00000481441 ELP6Q0PNE2 266 aa17.48■□□□□ 0.39
RXRB-203ENST00000481441 SERINC3Q13530 473 aa17.48■□□□□ 0.39
RXRB-203ENST00000481441 ARHGEF7Q14155 803 aa17.48■□□□□ 0.39
RXRB-203ENST00000481441 EFHC2Q5JST6 749 aa17.48■□□□□ 0.39
RXRB-203ENST00000481441 TAF8Q7Z7C8 310 aa17.48■□□□□ 0.39
RXRB-203ENST00000481441 IRF2BP1Q8IU81 584 aa17.48■□□□□ 0.39
RXRB-203ENST00000481441 TMEM35BQ8NCS4 154 aa17.48■□□□□ 0.39
RXRB-203ENST00000481441 PMEPA1Q969W9 287 aa17.48■□□□□ 0.39
RXRB-203ENST00000481441 RETREG1Q9H6L5 497 aa17.48■□□□□ 0.39
RXRB-203ENST00000481441 RDH14Q9HBH5 336 aa17.48■□□□□ 0.39
RXRB-203ENST00000481441 OR12D3Q9UGF7 316 aa17.48■□□□□ 0.39
RXRB-203ENST00000481441 TMEM59LQ9UK28 342 aa17.48■□□□□ 0.39
RXRB-203ENST00000481441 HPCAL4Q9UM19 191 aa17.48■□□□□ 0.39
RXRB-203ENST00000481441 NEU3Q9UQ49 428 aa17.48■□□□□ 0.39
RXRB-203ENST00000481441 PCDHGA3Q9Y5H0 932 aa17.48■□□□□ 0.39
RXRB-203ENST00000481441 B4GAT1O43505 415 aa17.47■□□□□ 0.39
RXRB-203ENST00000481441 KDELR3O43731 214 aa17.47■□□□□ 0.39
RXRB-203ENST00000481441 CPNE6O95741 557 aa17.47■□□□□ 0.39
RXRB-203ENST00000481441 PNMA6AP0CW24 399 aaPredicted RBP17.47■□□□□ 0.39
RXRB-203ENST00000481441 MTM1Q13496 603 aa17.47■□□□□ 0.39
RXRB-203ENST00000481441 MAP9Q49MG5 647 aa17.47■□□□□ 0.39
RXRB-203ENST00000481441 RAB6CQ53S08 254 aa17.47■□□□□ 0.39
RXRB-203ENST00000481441 GBP6Q6ZN66 633 aa17.47■□□□□ 0.39
RXRB-203ENST00000481441 PIM3Q86V86 326 aa17.47■□□□□ 0.39
RXRB-203ENST00000481441 RAB6CQ9H0N0 254 aa17.47■□□□□ 0.39
RXRB-203ENST00000481441 FGF22Q9HCT0 170 aa17.47■□□□□ 0.39
RXRB-203ENST00000481441 AKAP7Q9P0M2 348 aaPredicted RBP17.47■□□□□ 0.39
RXRB-203ENST00000481441 MYO9AB2RTY4 2548 aa17.47■□□□□ 0.39
RXRB-203ENST00000481441 TSPAN11A1L157 253 aa17.47■□□□□ 0.39
RXRB-203ENST00000481441 TMEM202A6NGA9 273 aa17.47■□□□□ 0.39
RXRB-203ENST00000481441 ZSCAN5CA6NGD5 496 aaPredicted RBP17.47■□□□□ 0.39
RXRB-203ENST00000481441 B4DGG1 531 aa17.47■□□□□ 0.39
RXRB-203ENST00000481441 FAM72CH0Y354 149 aa17.47■□□□□ 0.39
RXRB-203ENST00000481441 HGSO14964 777 aaPredicted RBP17.47■□□□□ 0.39
RXRB-203ENST00000481441 INSIG1O15503 277 aa17.47■□□□□ 0.39
RXRB-203ENST00000481441 BUB1O43683 1085 aa17.47■□□□□ 0.39
RXRB-203ENST00000481441 RAMP2O60895 175 aa17.47■□□□□ 0.39
RXRB-203ENST00000481441 IGSF6O95976 241 aa17.47■□□□□ 0.39
RXRB-203ENST00000481441 PCCBP05166 539 aa17.47■□□□□ 0.39
RXRB-203ENST00000481441 FGF3P11487 239 aaPredicted RBP17.47■□□□□ 0.39
RXRB-203ENST00000481441 LIFP15018 202 aa17.47■□□□□ 0.39
RXRB-203ENST00000481441 XPAP23025 273 aaPredicted RBP17.47■□□□□ 0.39
RXRB-203ENST00000481441 PON1P27169 355 aa17.47■□□□□ 0.39
RXRB-203ENST00000481441 CCR10P46092 362 aa17.47■□□□□ 0.39
RXRB-203ENST00000481441 KIAA1024LP59773 190 aa17.47■□□□□ 0.39
RXRB-203ENST00000481441 RHOAP61586 193 aa17.47■□□□□ 0.39
RXRB-203ENST00000481441 PAK1Q13153 545 aa17.47■□□□□ 0.39
RXRB-203ENST00000481441 C2CD6Q53TS8 623 aa17.47■□□□□ 0.39
RXRB-203ENST00000481441 FAM72AQ5TYM5 149 aa17.47■□□□□ 0.39
RXRB-203ENST00000481441 SPECC1LQ69YQ0 1117 aa17.47■□□□□ 0.39
RXRB-203ENST00000481441 FAM72DQ6L9T8 149 aa17.47■□□□□ 0.39
RXRB-203ENST00000481441 RWDD4Q6NW29 188 aaKnown RBP17.47■□□□□ 0.39
RXRB-203ENST00000481441 FAM72BQ86X60 149 aa17.47■□□□□ 0.39
RXRB-203ENST00000481441 FAM26EQ8N5C1 309 aa17.47■□□□□ 0.39
RXRB-203ENST00000481441 NETO2Q8NC67 525 aa17.47■□□□□ 0.39
RXRB-203ENST00000481441 PLA2G15Q8NCC3 412 aa17.47■□□□□ 0.39
RXRB-203ENST00000481441 OR56A4Q8NGH8 313 aa17.47■□□□□ 0.39
RXRB-203ENST00000481441 GPBAR1Q8TDU6 330 aa17.47■□□□□ 0.39
RXRB-203ENST00000481441 HMCESQ96FZ2 354 aa17.47■□□□□ 0.39
RXRB-203ENST00000481441 TAAR9Q96RI9 348 aa17.47■□□□□ 0.39
RXRB-203ENST00000481441 NUDT22Q9BRQ3 303 aa17.47■□□□□ 0.39
RXRB-203ENST00000481441 CDH19Q9H159 772 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms