RNA–Protein interactions for RNA: ENST00000481004.1

LINC02040-201, Transcript of long intergenic non-protein coding RNA 2040, humanhuman

TSL 5 BASIC

Gene LINC02040, Length 556 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02040-201ENST00000481004 CCAR2Q8N163 923 aaKnown RBP5.7□□□□□ -1.5
LINC02040-201ENST00000481004 CARNMT1Q8N4J0 409 aa5.7□□□□□ -1.5
LINC02040-201ENST00000481004 MINDY1Q8N5J2 469 aa5.7□□□□□ -1.5
LINC02040-201ENST00000481004 AADATQ8N5Z0 425 aa5.7□□□□□ -1.5
LINC02040-201ENST00000481004 WFIKKN2Q8TEU8 576 aa5.7□□□□□ -1.5
LINC02040-201ENST00000481004 FRS2Q8WU20 508 aa5.7□□□□□ -1.5
LINC02040-201ENST00000481004 PTPRN2Q92932 1015 aa5.7□□□□□ -1.5
LINC02040-201ENST00000481004 NT5C3BQ969T7 300 aa5.7□□□□□ -1.5
LINC02040-201ENST00000481004 BIRC7Q96CA5 298 aa5.7□□□□□ -1.5
LINC02040-201ENST00000481004 SIPA1Q96FS4 1042 aa5.7□□□□□ -1.5
LINC02040-201ENST00000481004 RPL10LQ96L21 214 aaKnown RBP5.7□□□□□ -1.5
LINC02040-201ENST00000481004 FCRL3Q96P31 734 aaPredicted RBP5.7□□□□□ -1.5
LINC02040-201ENST00000481004 PCDHB18PQ96TA0 734 aa5.7□□□□□ -1.5
LINC02040-201ENST00000481004 TBCBQ99426 244 aa5.7□□□□□ -1.5
LINC02040-201ENST00000481004 PSMB7Q99436 277 aa5.7□□□□□ -1.5
LINC02040-201ENST00000481004 GTPBP2Q9BX10 602 aaKnown RBP5.7□□□□□ -1.5
LINC02040-201ENST00000481004 FAM204AQ9H8W3 233 aa5.7□□□□□ -1.5
LINC02040-201ENST00000481004 FANCLQ9NW38 375 aa5.7□□□□□ -1.5
LINC02040-201ENST00000481004 DDIT4Q9NX09 232 aa5.7□□□□□ -1.5
LINC02040-201ENST00000481004 COX16Q9P0S2 106 aa5.7□□□□□ -1.5
LINC02040-201ENST00000481004 CGGBP1Q9UFW8 167 aaPredicted RBP5.7□□□□□ -1.5
LINC02040-201ENST00000481004 EIF2B4Q9UI10 523 aaKnown RBP5.7□□□□□ -1.5
LINC02040-201ENST00000481004 SARDHQ9UL12 918 aa5.7□□□□□ -1.5
LINC02040-201ENST00000481004 NEU3Q9UQ49 428 aa5.7□□□□□ -1.5
LINC02040-201ENST00000481004 ERVW-1Q9UQF0 538 aa5.7□□□□□ -1.5
LINC02040-201ENST00000481004 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.7□□□□□ -1.5
LINC02040-201ENST00000481004 NFE2L3Q9Y4A8 694 aa5.7□□□□□ -1.5
LINC02040-201ENST00000481004 HS3ST4Q9Y661 456 aa5.7□□□□□ -1.5
LINC02040-201ENST00000481004 CACNA1BQ00975 2339 aa5.7□□□□□ -1.5
LINC02040-201ENST00000481004 KNL1Q8NG31 2342 aa5.7□□□□□ -1.5
LINC02040-201ENST00000481004 ITIH6Q6UXX5 1313 aa5.7□□□□□ -1.5
LINC02040-201ENST00000481004 K7ERQ8 282 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 M0QYT0 321 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 KCNK3O14649 394 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 CAPN9O14815 690 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 MID1O15344 667 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 FGF10O15520 208 aaPredicted RBP5.69□□□□□ -1.5
LINC02040-201ENST00000481004 SMAD6O43541 496 aaKnown RBP5.69□□□□□ -1.5
LINC02040-201ENST00000481004 TIMM44O43615 452 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 SYNCRIPO60506 623 aaKnown RBP5.69□□□□□ -1.5
LINC02040-201ENST00000481004 HSF2BPO75031 334 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 CBFA2T3O75081 653 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 TSPAN15O95858 294 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 MT-CO1P00395 513 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 WNT1P04628 370 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 C1QTNF9P0C862 333 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 IFNGR1P15260 489 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 PDGFRAP16234 1089 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 PRKCAP17252 672 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 CSRP1P21291 193 aaKnown RBP5.69□□□□□ -1.5
LINC02040-201ENST00000481004 HOXD12P35452 270 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 DRD3P35462 400 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 MATKP42679 507 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 GABRB2P47870 512 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 CSNK1EP49674 416 aaKnown RBP5.69□□□□□ -1.5
LINC02040-201ENST00000481004 CXCR3P49682 368 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 SEPHS1P49903 392 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 RNASE9P60153 205 aaKnown RBP5.69□□□□□ -1.5
LINC02040-201ENST00000481004 SHC2P98077 582 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 FMO1Q01740 532 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 BYSLQ13895 437 aaKnown RBP5.69□□□□□ -1.5
LINC02040-201ENST00000481004 RAPGEF1Q13905 1077 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 STARD3Q14849 445 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 C5orf22Q49AR2 442 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 NAA35Q5VZE5 725 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 OR6B2Q6IFH4 312 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 MMAAQ8IVH4 418 aaKnown RBP5.69□□□□□ -1.5
LINC02040-201ENST00000481004 STK40Q8N2I9 435 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 ARHGEF39Q8N4T4 335 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 EMC1Q8N766 993 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 ZNF397Q8NF99 534 aaPredicted RBP5.69□□□□□ -1.5
LINC02040-201ENST00000481004 NUP43Q8NFH3 380 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 CADM4Q8NFZ8 388 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 JOSD2Q8TAC2 188 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 SLC30A5Q8TAD4 765 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 UCMAQ8WVF2 138 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 CPA5Q8WXQ8 436 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 PRCCQ92733 491 aaPredicted RBP5.69□□□□□ -1.5
LINC02040-201ENST00000481004 PPP1R14AQ96A00 147 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 FAM131CQ96AQ9 280 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 BTN2A3PQ96KV6 586 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 CFAP57Q96MR6 1250 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 FEM1AQ9BSK4 669 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 VPS16Q9H269 839 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 PABPC3Q9H361 631 aaKnown RBP5.69□□□□□ -1.5
LINC02040-201ENST00000481004 IGSF5Q9NSI5 407 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 ASNSD1Q9NWL6 643 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 ARHGEF38Q9NXL2 777 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 KLK13Q9UKR3 277 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 VANGL2Q9ULK5 521 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 PLA2G4CQ9UP65 541 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 BTBD3Q9Y2F9 522 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 ACTL7AQ9Y615 435 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 PKD1L2Q7Z442 2459 aa5.69□□□□□ -1.5
LINC02040-201ENST00000481004 IGLV3-10A0A075B6K4 115 aa5.68□□□□□ -1.5
LINC02040-201ENST00000481004 A0A0D9SEW6 157 aa5.68□□□□□ -1.5
LINC02040-201ENST00000481004 A0A1B0GVM2 712 aa5.68□□□□□ -1.5
LINC02040-201ENST00000481004 A0A1B0GVT2 93 aa5.68□□□□□ -1.5
LINC02040-201ENST00000481004 A0A1W2PQJ5 194 aa5.68□□□□□ -1.5
LINC02040-201ENST00000481004 TCRBV5S1A1TA0A578 114 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms