RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 GALNT2Q10471 571 aa17.13■□□□□ 0.33
HSPG2-209ENST00000480900 TCEAL1Q15170 157 aa17.13■□□□□ 0.33
HSPG2-209ENST00000480900 MARC1Q5VT66 337 aa17.13■□□□□ 0.33
HSPG2-209ENST00000480900 NCBP2-AS2Q69YL0 99 aa17.13■□□□□ 0.33
HSPG2-209ENST00000480900 SLC25A45Q8N413 288 aa17.13■□□□□ 0.33
HSPG2-209ENST00000480900 PGBD5Q8N414 524 aa17.13■□□□□ 0.33
HSPG2-209ENST00000480900 TC2NQ8N9U0 490 aa17.13■□□□□ 0.33
HSPG2-209ENST00000480900 TP53I13Q8NBR0 393 aaPredicted RBP17.13■□□□□ 0.33
HSPG2-209ENST00000480900 NUDCD1Q96RS6 583 aa17.13■□□□□ 0.33
HSPG2-209ENST00000480900 DNAJC28Q9NX36 388 aa17.13■□□□□ 0.33
HSPG2-209ENST00000480900 RP1P56715 2156 aa17.13■□□□□ 0.33
HSPG2-209ENST00000480900 A0A1W2PQ67 120 aa17.12■□□□□ 0.33
HSPG2-209ENST00000480900 TMEM8BA6NDV4 472 aa17.12■□□□□ 0.33
HSPG2-209ENST00000480900 ZNF487B1APH4 448 aa17.12■□□□□ 0.33
HSPG2-209ENST00000480900 HTRA2O43464 458 aaPredicted RBP17.12■□□□□ 0.33
HSPG2-209ENST00000480900 SOCS5O75159 536 aa17.12■□□□□ 0.33
HSPG2-209ENST00000480900 CSF2P04141 144 aa17.12■□□□□ 0.33
HSPG2-209ENST00000480900 C1SP09871 688 aa17.12■□□□□ 0.33
HSPG2-209ENST00000480900 CDK4P11802 303 aa17.12■□□□□ 0.33
HSPG2-209ENST00000480900 THOP1P52888 689 aa17.12■□□□□ 0.33
HSPG2-209ENST00000480900 YPEL5P62699 121 aa17.12■□□□□ 0.33
HSPG2-209ENST00000480900 ZNF211Q13398 564 aaPredicted RBP17.12■□□□□ 0.33
HSPG2-209ENST00000480900 PDE1CQ14123 709 aaPredicted RBP17.12■□□□□ 0.33
HSPG2-209ENST00000480900 PTK2BQ14289 1009 aa17.12■□□□□ 0.33
HSPG2-209ENST00000480900 LRRC14Q15048 493 aa17.12■□□□□ 0.33
HSPG2-209ENST00000480900 AGERQ15109 404 aa17.12■□□□□ 0.33
HSPG2-209ENST00000480900 IRF4Q15306 451 aa17.12■□□□□ 0.33
HSPG2-209ENST00000480900 ST3GAL2Q16842 350 aa17.12■□□□□ 0.33
HSPG2-209ENST00000480900 ZFYVE27Q5T4F4 411 aa17.12■□□□□ 0.33
HSPG2-209ENST00000480900 TMPRSS7Q7RTY8 843 aa17.12■□□□□ 0.33
HSPG2-209ENST00000480900 VSIG1Q86XK7 387 aa17.12■□□□□ 0.33
HSPG2-209ENST00000480900 GALNT15Q8N3T1 639 aa17.12■□□□□ 0.33
HSPG2-209ENST00000480900 PAF1Q8N7H5 531 aa17.12■□□□□ 0.33
HSPG2-209ENST00000480900 OR4C6Q8NH72 309 aa17.12■□□□□ 0.33
HSPG2-209ENST00000480900 FATE1Q969F0 183 aa17.12■□□□□ 0.33
HSPG2-209ENST00000480900 NSMCE3Q96MG7 304 aa17.12■□□□□ 0.33
HSPG2-209ENST00000480900 SCUBE2Q9NQ36 999 aa17.12■□□□□ 0.33
HSPG2-209ENST00000480900 UCKL1Q9NWZ5 548 aa17.12■□□□□ 0.33
HSPG2-209ENST00000480900 NEMP2A6NFY4 417 aa17.11■□□□□ 0.33
HSPG2-209ENST00000480900 H3BM21 787 aa17.11■□□□□ 0.33
HSPG2-209ENST00000480900 TRIM38O00635 465 aa17.11■□□□□ 0.33
HSPG2-209ENST00000480900 RFPL3O75679 317 aa17.11■□□□□ 0.33
HSPG2-209ENST00000480900 CKMT2P17540 419 aa17.11■□□□□ 0.33
HSPG2-209ENST00000480900 KDELR1P24390 212 aa17.11■□□□□ 0.33
HSPG2-209ENST00000480900 ACADVLP49748 655 aa17.11■□□□□ 0.33
HSPG2-209ENST00000480900 LIG3P49916 1009 aa17.11■□□□□ 0.33
HSPG2-209ENST00000480900 RALGDSQ12967 914 aa17.11■□□□□ 0.33
HSPG2-209ENST00000480900 DNAJC3Q13217 504 aa17.11■□□□□ 0.33
HSPG2-209ENST00000480900 PROX2Q3B8N5 592 aa17.11■□□□□ 0.33
HSPG2-209ENST00000480900 HS1BP3Q53T59 392 aa17.11■□□□□ 0.33
HSPG2-209ENST00000480900 TPRG1LQ5T0D9 272 aa17.11■□□□□ 0.33
HSPG2-209ENST00000480900 LRRC38Q5VT99 294 aa17.11■□□□□ 0.33
HSPG2-209ENST00000480900 TIGD7Q6NT04 549 aaPredicted RBP17.11■□□□□ 0.33
HSPG2-209ENST00000480900 CCNI2Q6ZMN8 369 aaPredicted RBP17.11■□□□□ 0.33
HSPG2-209ENST00000480900 DPPA4Q7L190 304 aa17.11■□□□□ 0.33
HSPG2-209ENST00000480900 TEX26Q8N6G2 289 aa17.11■□□□□ 0.33
HSPG2-209ENST00000480900 PQLC3Q8N755 202 aa17.11■□□□□ 0.33
HSPG2-209ENST00000480900 RAPGEF5Q92565 580 aa17.11■□□□□ 0.33
HSPG2-209ENST00000480900 TSGA13Q96PP4 275 aa17.11■□□□□ 0.33
HSPG2-209ENST00000480900 ANP32EQ9BTT0 268 aa17.11■□□□□ 0.33
HSPG2-209ENST00000480900 NOD2Q9HC29 1040 aa17.11■□□□□ 0.33
HSPG2-209ENST00000480900 MBNL1Q9NR56 388 aaKnown RBP17.11■□□□□ 0.33
HSPG2-209ENST00000480900 NLGN3Q9NZ94 848 aa17.11■□□□□ 0.33
HSPG2-209ENST00000480900 COQ6Q9Y2Z9 468 aa17.11■□□□□ 0.33
HSPG2-209ENST00000480900 ARHGEF17Q96PE2 2063 aaPredicted RBP17.11■□□□□ 0.33
HSPG2-209ENST00000480900 TTC24A2A3L6 582 aaPredicted RBP17.1■□□□□ 0.33
HSPG2-209ENST00000480900 LRRD1A4D1F6 860 aa17.1■□□□□ 0.33
HSPG2-209ENST00000480900 SIGLEC6O43699 453 aa17.1■□□□□ 0.33
HSPG2-209ENST00000480900 LZTS3O60299 673 aaPredicted RBP17.1■□□□□ 0.33
HSPG2-209ENST00000480900 PRKCGP05129 697 aa17.1■□□□□ 0.33
HSPG2-209ENST00000480900 ALPPL2P10696 532 aa17.1■□□□□ 0.33
HSPG2-209ENST00000480900 MX2P20592 715 aa17.1■□□□□ 0.33
HSPG2-209ENST00000480900 NFKBIAP25963 317 aa17.1■□□□□ 0.33
HSPG2-209ENST00000480900 SLC1A1P43005 524 aa17.1■□□□□ 0.33
HSPG2-209ENST00000480900 ZNF75DP51815 510 aa17.1■□□□□ 0.33
HSPG2-209ENST00000480900 EIF2B5Q13144 721 aaKnown RBP17.1■□□□□ 0.33
HSPG2-209ENST00000480900 ILKQ13418 452 aa17.1■□□□□ 0.33
HSPG2-209ENST00000480900 SMAD1Q15797 465 aaKnown RBP17.1■□□□□ 0.33
HSPG2-209ENST00000480900 IFI16Q16666 785 aaKnown RBP17.1■□□□□ 0.33
HSPG2-209ENST00000480900 WSCD2Q2TBF2 565 aa17.1■□□□□ 0.33
HSPG2-209ENST00000480900 CCDC157Q569K6 752 aa17.1■□□□□ 0.33
HSPG2-209ENST00000480900 ZNF542PQ5EBM4 170 aa17.1■□□□□ 0.33
HSPG2-209ENST00000480900 LIPIQ6XZB0 460 aa17.1■□□□□ 0.33
HSPG2-209ENST00000480900 KDM7AQ6ZMT4 941 aa17.1■□□□□ 0.33
HSPG2-209ENST00000480900 MACC1Q6ZN28 852 aa17.1■□□□□ 0.33
HSPG2-209ENST00000480900 KDF1Q8NAX2 398 aaPredicted RBP17.1■□□□□ 0.33
HSPG2-209ENST00000480900 ZNF548Q8NEK5 533 aaPredicted RBP17.1■□□□□ 0.33
HSPG2-209ENST00000480900 MAML1Q92585 1016 aa17.1■□□□□ 0.33
HSPG2-209ENST00000480900 MRFAP1L1Q96HT8 127 aa17.1■□□□□ 0.33
HSPG2-209ENST00000480900 RBSNQ9H1K0 784 aa17.1■□□□□ 0.33
HSPG2-209ENST00000480900 PCDHGC4Q9Y5F7 938 aa17.1■□□□□ 0.33
HSPG2-209ENST00000480900 CSNK1G3Q9Y6M4 447 aa17.1■□□□□ 0.33
HSPG2-209ENST00000480900 DMXL2Q8TDJ6 3036 aa17.1■□□□□ 0.33
HSPG2-209ENST00000480900 PKD1L2Q7Z442 2459 aa17.1■□□□□ 0.33
HSPG2-209ENST00000480900 SCAMP1O15126 338 aa17.09■□□□□ 0.33
HSPG2-209ENST00000480900 MATN3O15232 486 aa17.09■□□□□ 0.33
HSPG2-209ENST00000480900 FFAR2O15552 330 aa17.09■□□□□ 0.33
HSPG2-209ENST00000480900 LCA5LO95447 670 aa17.09■□□□□ 0.33
HSPG2-209ENST00000480900 ELFN1P0C7U0 828 aa17.09■□□□□ 0.33
HSPG2-209ENST00000480900 GIMD1P0DJR0 217 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms