RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 C5orf22Q49AR2 442 aa16.92■□□□□ 0.3
SH3D21-203ENST00000480549 SMUG1Q53HV7 270 aa16.92■□□□□ 0.3
SH3D21-203ENST00000480549 MARC1Q5VT66 337 aa16.92■□□□□ 0.3
SH3D21-203ENST00000480549 POTEHQ6S545 545 aa16.92■□□□□ 0.3
SH3D21-203ENST00000480549 CLNKQ7Z7G1 428 aa16.92■□□□□ 0.3
SH3D21-203ENST00000480549 ACVR1CQ8NER5 493 aa16.92■□□□□ 0.3
SH3D21-203ENST00000480549 FAM161BQ96MY7 647 aa16.92■□□□□ 0.3
SH3D21-203ENST00000480549 FSD1LQ9BXM9 530 aa16.92■□□□□ 0.3
SH3D21-203ENST00000480549 ATXN3LQ9H3M9 355 aa16.92■□□□□ 0.3
SH3D21-203ENST00000480549 SP110Q9HB58 689 aa16.92■□□□□ 0.3
SH3D21-203ENST00000480549 MRM3Q9HC36 420 aaKnown RBP16.92■□□□□ 0.3
SH3D21-203ENST00000480549 AFF4Q9UHB7 1163 aaKnown RBP16.92■□□□□ 0.3
SH3D21-203ENST00000480549 DNMT3LQ9UJW3 386 aa16.92■□□□□ 0.3
SH3D21-203ENST00000480549 TCAF1Q9Y4C2 921 aa16.92■□□□□ 0.3
SH3D21-203ENST00000480549 ANAPC1Q9H1A4 1944 aa16.92■□□□□ 0.3
SH3D21-203ENST00000480549 SNNO75324 88 aaPredicted RBP16.92■□□□□ 0.3
SH3D21-203ENST00000480549 ABLIM3O94929 683 aa16.92■□□□□ 0.3
SH3D21-203ENST00000480549 GJB5O95377 273 aa16.92■□□□□ 0.3
SH3D21-203ENST00000480549 ARNTP27540 789 aa16.92■□□□□ 0.3
SH3D21-203ENST00000480549 SLC6A4P31645 630 aa16.92■□□□□ 0.3
SH3D21-203ENST00000480549 TMPRSS15P98073 1019 aa16.92■□□□□ 0.3
SH3D21-203ENST00000480549 ZNF784Q8NCA9 323 aaPredicted RBP16.92■□□□□ 0.3
SH3D21-203ENST00000480549 PABPC5Q96DU9 382 aaKnown RBP16.92■□□□□ 0.3
SH3D21-203ENST00000480549 ZNF395Q9H8N7 513 aaPredicted RBP16.92■□□□□ 0.3
SH3D21-203ENST00000480549 ZNF840PA6NDX5 716 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 RAMP2O60895 175 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 HOXD11P31277 338 aaPredicted RBP16.91■□□□□ 0.3
SH3D21-203ENST00000480549 ATP5C1P36542 298 aaKnown RBP16.91■□□□□ 0.3
SH3D21-203ENST00000480549 RXRGP48443 463 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 ARCN1P48444 511 aaKnown RBP16.91■□□□□ 0.3
SH3D21-203ENST00000480549 MAPKAPK2P49137 400 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 CSRP3P50461 194 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 IRX4P78413 519 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 BTKQ06187 659 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 SERINC3Q13530 473 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 POLD3Q15054 466 aaPredicted RBP16.91■□□□□ 0.3
SH3D21-203ENST00000480549 PARP15Q460N3 678 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 ATG16L1Q676U5 607 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 TMCO2Q7Z6W1 182 aaPredicted RBP16.91■□□□□ 0.3
SH3D21-203ENST00000480549 PGBD5Q8N414 524 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 PPHLN1Q8NEY8 458 aaKnown RBP16.91■□□□□ 0.3
SH3D21-203ENST00000480549 PTCD2Q8WV60 388 aaKnown RBP16.91■□□□□ 0.3
SH3D21-203ENST00000480549 OVCA2Q8WZ82 227 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 ATP2A3Q93084 1043 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 ZNF689Q96CS4 500 aaPredicted RBP16.91■□□□□ 0.3
SH3D21-203ENST00000480549 CLIP3Q96DZ5 547 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 CDK5RAP1Q96SZ6 601 aaKnown RBP16.91■□□□□ 0.3
SH3D21-203ENST00000480549 C20orf27Q9GZN8 174 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 ARNT2Q9HBZ2 717 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 TMEM216Q9P0N5 145 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 PROCP04070 461 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 SOD2P04179 222 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 ACVRL1P37023 503 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 IL10RBQ08334 325 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 ESRP1Q6NXG1 681 aaKnown RBP16.91■□□□□ 0.3
SH3D21-203ENST00000480549 C16orf87Q6PH81 154 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 ACAD11Q709F0 780 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 KDELC2Q7Z4H8 507 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 CNTN4Q8IWV2 1026 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 CFAP61Q8NHU2 1237 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 TADA1Q96BN2 335 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 RC3H2Q9HBD1 1191 aaKnown RBP16.91■□□□□ 0.3
SH3D21-203ENST00000480549 TREX1Q9NSU2 369 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 OR1E1P30953 314 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 NAA20P61599 178 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 DSC2Q02487 901 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 ITGA9Q13797 1035 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 PCLAFQ15004 111 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 PCSK7Q16549 785 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 FASTKD1Q53R41 847 aaKnown RBP16.91■□□□□ 0.3
SH3D21-203ENST00000480549 C6orf183Q5T699 404 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 MBLAC2Q68D91 279 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 PDZD8Q8NEN9 1154 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 ZNF461Q8TAF7 563 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 TOP1MTQ969P6 601 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 VPS39Q96JC1 886 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 CAB39LQ9H9S4 337 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 ZNF358Q9NW07 568 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 SLC2A6Q9UGQ3 507 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 CROTQ9UKG9 612 aa16.91■□□□□ 0.3
SH3D21-203ENST00000480549 MKI67P46013 3256 aaKnown RBP16.9■□□□□ 0.3
SH3D21-203ENST00000480549 KIAA1671Q9BY89 1806 aa16.9■□□□□ 0.3
SH3D21-203ENST00000480549 TIMM44O43615 452 aa16.9■□□□□ 0.3
SH3D21-203ENST00000480549 ACSL4O60488 711 aa16.9■□□□□ 0.3
SH3D21-203ENST00000480549 GABRB3P28472 473 aa16.9■□□□□ 0.3
SH3D21-203ENST00000480549 PCSK6P29122 969 aa16.9■□□□□ 0.3
SH3D21-203ENST00000480549 CD86P42081 329 aa16.9■□□□□ 0.3
SH3D21-203ENST00000480549 CPA2P48052 419 aa16.9■□□□□ 0.3
SH3D21-203ENST00000480549 MSLNQ13421 630 aaPredicted RBP16.9■□□□□ 0.3
SH3D21-203ENST00000480549 KIAA1841Q6NSI8 718 aa16.9■□□□□ 0.3
SH3D21-203ENST00000480549 RAPH1Q70E73 1250 aa16.9■□□□□ 0.3
SH3D21-203ENST00000480549 CLEC14AQ86T13 490 aa16.9■□□□□ 0.3
SH3D21-203ENST00000480549 PATL1Q86TB9 770 aaKnown RBP16.9■□□□□ 0.3
SH3D21-203ENST00000480549 LGI2Q8N0V4 545 aa16.9■□□□□ 0.3
SH3D21-203ENST00000480549 PLD6Q8N2A8 252 aaKnown RBP16.9■□□□□ 0.3
SH3D21-203ENST00000480549 RIN3Q8TB24 985 aa16.9■□□□□ 0.3
SH3D21-203ENST00000480549 ZNF512Q96ME7 567 aaPredicted RBP16.9■□□□□ 0.3
SH3D21-203ENST00000480549 ATP11BQ9Y2G3 1177 aa16.9■□□□□ 0.3
SH3D21-203ENST00000480549 PLXNA4Q9HCM2 1894 aa16.9■□□□□ 0.3
SH3D21-203ENST00000480549 A0A0G2JND7 137 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms