RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 RBM15Q96T37 977 aaKnown RBP eCLIP12.34□□□□□ -0.431e-17■■■■■ 28.3
TRA2B-212ENST00000480461 VAT1Q99536 393 aa12.34□□□□□ -0.43
TRA2B-212ENST00000480461 EDEM2Q9BV94 578 aa12.34□□□□□ -0.43
TRA2B-212ENST00000480461 HDAC8Q9BY41 377 aa12.34□□□□□ -0.43
TRA2B-212ENST00000480461 FRMD8P1Q9BZ68 369 aaPredicted RBP12.34□□□□□ -0.43
TRA2B-212ENST00000480461 SLC25A51Q9H1U9 297 aa12.34□□□□□ -0.43
TRA2B-212ENST00000480461 VPS45Q9NRW7 570 aa12.34□□□□□ -0.43
TRA2B-212ENST00000480461 WSB2Q9NYS7 404 aaPredicted RBP12.34□□□□□ -0.43
TRA2B-212ENST00000480461 UBP1Q9NZI7 540 aa12.34□□□□□ -0.43
TRA2B-212ENST00000480461 TRHDEQ9UKU6 1024 aa12.34□□□□□ -0.43
TRA2B-212ENST00000480461 LHX6Q9UPM6 363 aa12.34□□□□□ -0.43
TRA2B-212ENST00000480461 ZNF148Q9UQR1 794 aa12.34□□□□□ -0.43
TRA2B-212ENST00000480461 NEU2Q9Y3R4 380 aa12.34□□□□□ -0.43
TRA2B-212ENST00000480461 TTLL3Q9Y4R7 772 aa12.34□□□□□ -0.43
TRA2B-212ENST00000480461 GCN1Q92616 2671 aaKnown RBP12.33□□□□□ -0.44
TRA2B-212ENST00000480461 EML5Q05BV3 1969 aa12.33□□□□□ -0.44
TRA2B-212ENST00000480461 A0A0U1RQS6 177 aa12.33□□□□□ -0.44
TRA2B-212ENST00000480461 TSPAN11A1L157 253 aa12.33□□□□□ -0.44
TRA2B-212ENST00000480461 ADH1BP00325 375 aa12.33□□□□□ -0.44
TRA2B-212ENST00000480461 PRKCGP05129 697 aa12.33□□□□□ -0.44
TRA2B-212ENST00000480461 ACADMP11310 421 aa12.33□□□□□ -0.44
TRA2B-212ENST00000480461 ITGB7P26010 798 aa12.33□□□□□ -0.44
TRA2B-212ENST00000480461 STIP1P31948 543 aaKnown RBP12.33□□□□□ -0.44
TRA2B-212ENST00000480461 RPL22P35268 128 aaKnown RBP12.33□□□□□ -0.44
TRA2B-212ENST00000480461 COILP38432 576 aaPredicted RBP12.33□□□□□ -0.44
TRA2B-212ENST00000480461 ABL2P42684 1182 aa12.33□□□□□ -0.44
TRA2B-212ENST00000480461 SEMG2Q02383 582 aa12.33□□□□□ -0.44
TRA2B-212ENST00000480461 BCL2L1Q07817 233 aa12.33□□□□□ -0.44
TRA2B-212ENST00000480461 USP39Q53GS9 565 aaKnown RBP12.33□□□□□ -0.44
TRA2B-212ENST00000480461 FAM46CQ5VWP2 391 aa12.33□□□□□ -0.44
TRA2B-212ENST00000480461 KDELC1Q6UW63 502 aa12.33□□□□□ -0.44
TRA2B-212ENST00000480461 USP30Q70CQ3 517 aa12.33□□□□□ -0.44
TRA2B-212ENST00000480461 ERN2Q76MJ5 926 aaKnown RBP12.33□□□□□ -0.44
TRA2B-212ENST00000480461 BBS5Q8N3I7 341 aa12.33□□□□□ -0.44
TRA2B-212ENST00000480461 TAB3Q8N5C8 712 aaPredicted RBP12.33□□□□□ -0.44
TRA2B-212ENST00000480461 PIH1D2Q8WWB5 315 aa12.33□□□□□ -0.44
TRA2B-212ENST00000480461 MAIP1Q8WWC4 291 aa12.33□□□□□ -0.44
TRA2B-212ENST00000480461 ZCCHC14Q8WYQ9 949 aaKnown RBP12.33□□□□□ -0.44
TRA2B-212ENST00000480461 TOE1Q96GM8 510 aaKnown RBP12.33□□□□□ -0.44
TRA2B-212ENST00000480461 ZC3H10Q96K80 434 aaKnown RBP12.33□□□□□ -0.44
TRA2B-212ENST00000480461 SPATA13Q96N96 652 aa12.33□□□□□ -0.44
TRA2B-212ENST00000480461 FCRL5Q96RD9 977 aa12.33□□□□□ -0.44
TRA2B-212ENST00000480461 TRIB3Q96RU7 358 aa12.33□□□□□ -0.44
TRA2B-212ENST00000480461 OMDQ99983 421 aa12.33□□□□□ -0.44
TRA2B-212ENST00000480461 MLPHQ9BV36 600 aaPredicted RBP12.33□□□□□ -0.44
TRA2B-212ENST00000480461 KLHL8Q9P2G9 620 aaPredicted RBP12.33□□□□□ -0.44
TRA2B-212ENST00000480461 DKK3Q9UBP4 350 aa12.33□□□□□ -0.44
TRA2B-212ENST00000480461 GGT7Q9UJ14 662 aa12.33□□□□□ -0.44
TRA2B-212ENST00000480461 CHKBQ9Y259 395 aa12.33□□□□□ -0.44
TRA2B-212ENST00000480461 RAI2Q9Y5P3 530 aa12.33□□□□□ -0.44
TRA2B-212ENST00000480461 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.32□□□□□ -0.44
TRA2B-212ENST00000480461 C1QTNF3-AMACRE9PGA6 284 aa12.32□□□□□ -0.44
TRA2B-212ENST00000480461 AREL1O15033 823 aa12.32□□□□□ -0.44
TRA2B-212ENST00000480461 ZNF217O75362 1048 aa12.32□□□□□ -0.44
TRA2B-212ENST00000480461 PGLSO95336 258 aa12.32□□□□□ -0.44
TRA2B-212ENST00000480461 ADRB3P13945 408 aa12.32□□□□□ -0.44
TRA2B-212ENST00000480461 CES1P23141 567 aa12.32□□□□□ -0.44
TRA2B-212ENST00000480461 CD6P30203 668 aa12.32□□□□□ -0.44
TRA2B-212ENST00000480461 RAD51Q06609 339 aa12.32□□□□□ -0.44
TRA2B-212ENST00000480461 OLIG2Q13516 323 aa12.32□□□□□ -0.44
TRA2B-212ENST00000480461 UGP2Q16851 508 aa12.32□□□□□ -0.44
TRA2B-212ENST00000480461 RALGPS1Q5JS13 557 aa12.32□□□□□ -0.44
TRA2B-212ENST00000480461 KDELC2Q7Z4H8 507 aa12.32□□□□□ -0.44
TRA2B-212ENST00000480461 TTC7BQ86TV6 843 aa12.32□□□□□ -0.44
TRA2B-212ENST00000480461 KLHDC8BQ8IXV7 354 aa12.32□□□□□ -0.44
TRA2B-212ENST00000480461 ATL2Q8NHH9 583 aa12.32□□□□□ -0.44
TRA2B-212ENST00000480461 HCAR2Q8TDS4 363 aa12.32□□□□□ -0.44
TRA2B-212ENST00000480461 GANCQ8TET4 914 aa12.32□□□□□ -0.44
TRA2B-212ENST00000480461 SPOCK2Q92563 424 aa12.32□□□□□ -0.44
TRA2B-212ENST00000480461 ZNF592Q92610 1267 aa12.32□□□□□ -0.44
TRA2B-212ENST00000480461 COL26A1Q96A83 441 aa12.32□□□□□ -0.44
TRA2B-212ENST00000480461 MRGPRX2Q96LB1 330 aa12.32□□□□□ -0.44
TRA2B-212ENST00000480461 SCNM1Q9BWG6 230 aa12.32□□□□□ -0.44
TRA2B-212ENST00000480461 OSBPL1AQ9BXW6 950 aa12.32□□□□□ -0.44
TRA2B-212ENST00000480461 GBA3Q9H227 469 aa12.32□□□□□ -0.44
TRA2B-212ENST00000480461 ATP13A3Q9H7F0 1226 aa12.32□□□□□ -0.44
TRA2B-212ENST00000480461 SCML1Q9UN30 329 aa12.32□□□□□ -0.44
TRA2B-212ENST00000480461 ITM2BQ9Y287 266 aa12.32□□□□□ -0.44
TRA2B-212ENST00000480461 PCDHB9Q9Y5E1 797 aa12.32□□□□□ -0.44
TRA2B-212ENST00000480461 FADS3Q9Y5Q0 445 aa12.32□□□□□ -0.44
TRA2B-212ENST00000480461 LOC400499M0QZD8 3231 aa12.32□□□□□ -0.44
TRA2B-212ENST00000480461 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.31□□□□□ -0.44
TRA2B-212ENST00000480461 C4orf47A7E2U8 309 aa12.31□□□□□ -0.44
TRA2B-212ENST00000480461 OPHN1O60890 802 aa12.31□□□□□ -0.44
TRA2B-212ENST00000480461 PMPCBO75439 489 aa12.31□□□□□ -0.44
TRA2B-212ENST00000480461 NEBLO76041 1014 aa12.31□□□□□ -0.44
TRA2B-212ENST00000480461 AGTP01019 485 aa12.31□□□□□ -0.44
TRA2B-212ENST00000480461 IFNB1P01574 187 aa12.31□□□□□ -0.44
TRA2B-212ENST00000480461 SERPINF2P08697 491 aa12.31□□□□□ -0.44
TRA2B-212ENST00000480461 PSMB4P28070 264 aa12.31□□□□□ -0.44
TRA2B-212ENST00000480461 SERPINA4P29622 427 aa12.31□□□□□ -0.44
TRA2B-212ENST00000480461 PTGIRP43119 386 aa12.31□□□□□ -0.44
TRA2B-212ENST00000480461 MAPK8P45983 427 aa12.31□□□□□ -0.44
TRA2B-212ENST00000480461 ADPRHP54922 357 aa12.31□□□□□ -0.44
TRA2B-212ENST00000480461 GRM3Q14832 879 aa12.31□□□□□ -0.44
TRA2B-212ENST00000480461 PARP6Q2NL67 630 aa12.31□□□□□ -0.44
TRA2B-212ENST00000480461 PLK5Q496M5 336 aa12.31□□□□□ -0.44
TRA2B-212ENST00000480461 FAXCQ5TGI0 409 aa12.31□□□□□ -0.44
TRA2B-212ENST00000480461 SLC41A1Q8IVJ1 513 aa12.31□□□□□ -0.44
TRA2B-212ENST00000480461 TMEFF1Q8IYR6 380 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms