RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 THRSPQ92748 146 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 APBA2Q99767 749 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 GRHL1Q9NZI5 618 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 OR12D3Q9UGF7 316 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 CHKBQ9Y259 395 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 SAMHD1Q9Y3Z3 626 aaKnown RBP6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 E5RJQ4 531 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 M0QX08 132 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 SUV39H1O43463 412 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 KERAO60938 352 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 ERN1O75460 977 aaKnown RBP6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 IFNA16P05015 189 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 SRPRAP08240 638 aaKnown RBP6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 GSSP48637 474 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 CBX3Q13185 183 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 C16orf46Q6P387 395 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 KLHL17Q6TDP4 642 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 CRTC3Q6UUV7 619 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 RNF148Q8N7C7 305 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 ACER1Q8TDN7 264 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 PHF10Q8WUB8 498 aaKnown RBP6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 IRGQQ8WZA9 623 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 PHF21BQ96EK2 531 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 ZNF607Q96SK3 696 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 SH2D3AQ9BRG2 576 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 GPATCH1Q9BRR8 931 aaKnown RBP6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 UNKQ9C0B0 810 aaKnown RBP6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 ATP13A1Q9HD20 1204 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 IKZF3Q9UKT9 509 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 CNTN6Q9UQ52 1028 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 BTN3A1O00481 513 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 ORC5O43913 435 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 MAFO75444 373 aaPredicted RBP6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 AOC1P19801 751 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 SLC6A4P31645 630 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 TOP6BLQ8N6T0 577 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 OR52L1Q8NGH7 329 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 DCAKDQ8WVC6 231 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 BTN2A2Q8WVV5 523 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 CPT1BQ92523 772 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 UROC1Q96N76 676 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 APOL2Q9BQE5 337 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 SDCBP2Q9H190 292 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 POMKQ9H5K3 350 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 RMI1Q9H9A7 625 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 PCDH18Q9HCL0 1135 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 FBXO6Q9NRD1 293 aaPredicted RBP6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 ZDHHC18Q9NUE0 388 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 THUMPD1Q9NXG2 353 aaKnown RBP6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 SLC7A8Q9UHI5 535 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 VPS28Q9UK41 221 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 COQ6Q9Y2Z9 468 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 SLC12A8A0AV02 714 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 TFRCP02786 760 aaKnown RBP6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 LPOP22079 712 aaPredicted RBP6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 GRK4P32298 578 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 KIR3DL1P43629 444 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 TUBP50607 506 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 PLK1P53350 603 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 RPS7P62081 194 aaKnown RBP6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 MTM1Q13496 603 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 HNRNPDQ14103 355 aaKnown RBP6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 MAPK11Q15759 364 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 EIF5AL1Q6IS14 154 aaKnown RBP6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 APTXQ7Z2E3 356 aaKnown RBP6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 CLEC10AQ8IUN9 316 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 NIPA2Q8N8Q9 360 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 CLP1Q92989 425 aaKnown RBP6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 ASB9Q96DX5 294 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 B3GALT6Q96L58 329 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 ZCWPW1Q9H0M4 648 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 NXF3Q9H4D5 531 aaKnown RBP6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 TMEM45AQ9NWC5 275 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 V9GYQ6 96 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 PBRM1Q86U86 1689 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 A0A0G2JLW4 131 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 MTRF1O75570 445 aaKnown RBP6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 NPPAP01160 153 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 BMP7P18075 431 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 GJA8P48165 433 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 CLCN3P51790 818 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 FAM189A2Q15884 450 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 CRY1Q16526 586 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 MGAT5BQ3V5L5 792 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 KHDC1Q4VXA5 237 aaKnown RBP6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 ARMC6Q6NXE6 501 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 MACC1Q6ZN28 852 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 CHMP1BQ7LBR1 199 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 CUZD1Q86UP6 607 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 CPNE9Q8IYJ1 553 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 BPIFB6Q8NFQ5 453 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 SNIP1Q8TAD8 396 aaKnown RBP6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 GLOD4Q9HC38 313 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 TLL2Q9Y6L7 1015 aa6.18□□□□□ -1.42
PRPF4B-205ENST00000480058 C17orf102A2RUQ5 167 aa6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 MEIS2O14770 477 aa6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 SDC2P34741 201 aa6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 RHDQ02161 417 aa6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 MYBPC3Q14896 1274 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms