RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 PABPC3Q9H361 631 aaKnown RBP12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 EPB41L5Q9HCM4 733 aa12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 ZDHHC18Q9NUE0 388 aa12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 PHTF1Q9UMS5 762 aa12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 CHKBQ9Y259 395 aa12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 PCDHB9Q9Y5E1 797 aa12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 EML5Q05BV3 1969 aa12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 A0A0J9YYE9 177 aa12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 ESYT3A0FGR9 886 aa12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 CAPN8A6NHC0 703 aa12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 ANKRD66B4E2M5 251 aa12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 MID1O15344 667 aa12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 SLC7A4O43246 635 aa12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 ALDH1A2O94788 518 aa12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 AGTP01019 485 aa12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 IGLV3-19P01714 112 aa12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 TRBC1P01850 177 aa12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 DNTTP04053 509 aa12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 DCNP07585 359 aaKnown RBP12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 ECHS1P30084 290 aa12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 HOXA6P31267 233 aa12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 SLC8A1P32418 973 aa12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 NEK3P51956 506 aa12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 CCDC15Q0P6D6 951 aa12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 MSLNQ13421 630 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 QPCTQ16769 361 aa12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 UGP2Q16851 508 aa12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 SIRPB2Q5JXA9 342 aa12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 CFAP58Q5T655 872 aa12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 ERN2Q76MJ5 926 aaKnown RBP12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 KBTBD6Q86V97 674 aa12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 CAND1Q86VP6 1230 aaKnown RBP12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 ZCCHC9Q8N567 271 aaKnown RBP12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 AADATQ8N5Z0 425 aa12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 LPCAT1Q8NF37 534 aa12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 TSTD1Q8NFU3 115 aa12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 SIPA1Q96FS4 1042 aa12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 SERPINB12Q96P63 405 aa12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 DYRK4Q9NR20 520 aa12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 PRMT8Q9NR22 394 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 C2orf42Q9NWW7 574 aa12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 USP36Q9P275 1121 aaKnown RBP12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 EBF1Q9UH73 591 aa12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 ANAPC5Q9UJX4 755 aa12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 FZD4Q9ULV1 537 aa12.62□□□□□ -0.39
TRAPPC12-218ENST00000479897 LRRK1Q38SD2 2015 aa12.61□□□□□ -0.39
TRAPPC12-218ENST00000479897 E7ESA3 106 aa12.61□□□□□ -0.39
TRAPPC12-218ENST00000479897 TNFRSF10AO00220 468 aa12.61□□□□□ -0.39
TRAPPC12-218ENST00000479897 AREL1O15033 823 aa12.61□□□□□ -0.39
TRAPPC12-218ENST00000479897 PI15O43692 258 aa12.61□□□□□ -0.39
TRAPPC12-218ENST00000479897 AP1G1O43747 822 aa12.61□□□□□ -0.39
TRAPPC12-218ENST00000479897 USP12O75317 370 aa12.61□□□□□ -0.39
TRAPPC12-218ENST00000479897 APBB3O95704 486 aa12.61□□□□□ -0.39
TRAPPC12-218ENST00000479897 ADRB3P13945 408 aa12.61□□□□□ -0.39
TRAPPC12-218ENST00000479897 MMP12P39900 470 aa12.61□□□□□ -0.39
TRAPPC12-218ENST00000479897 P2RY2P41231 377 aa12.61□□□□□ -0.39
TRAPPC12-218ENST00000479897 GRIA1P42261 906 aa12.61□□□□□ -0.39
TRAPPC12-218ENST00000479897 CHRNA4P43681 627 aa12.61□□□□□ -0.39
TRAPPC12-218ENST00000479897 METAP1P53582 386 aa12.61□□□□□ -0.39
TRAPPC12-218ENST00000479897 ELP6Q0PNE2 266 aa12.61□□□□□ -0.39
TRAPPC12-218ENST00000479897 OLIG2Q13516 323 aa12.61□□□□□ -0.39
TRAPPC12-218ENST00000479897 GALNT3Q14435 633 aa12.61□□□□□ -0.39
TRAPPC12-218ENST00000479897 SPARCL1Q14515 664 aa12.61□□□□□ -0.39
TRAPPC12-218ENST00000479897 TRADDQ15628 312 aa12.61□□□□□ -0.39
TRAPPC12-218ENST00000479897 ERCC6LQ2NKX8 1250 aa12.61□□□□□ -0.39
TRAPPC12-218ENST00000479897 SYCP2LQ5T4T6 812 aa12.61□□□□□ -0.39
TRAPPC12-218ENST00000479897 PIP5KL1Q5T9C9 394 aa12.61□□□□□ -0.39
TRAPPC12-218ENST00000479897 AGBL4Q5VU57 503 aa12.61□□□□□ -0.39
TRAPPC12-218ENST00000479897 WDR93Q6P2C0 686 aa12.61□□□□□ -0.39
TRAPPC12-218ENST00000479897 USP45Q70EL2 814 aa12.61□□□□□ -0.39
TRAPPC12-218ENST00000479897 NDUFAF2Q8N183 169 aa12.61□□□□□ -0.39
TRAPPC12-218ENST00000479897 FBXL6Q8N531 539 aa12.61□□□□□ -0.39
TRAPPC12-218ENST00000479897 GPR161Q8N6U8 529 aaKnown RBP12.61□□□□□ -0.39
TRAPPC12-218ENST00000479897 MDGA1Q8NFP4 955 aa12.61□□□□□ -0.39
TRAPPC12-218ENST00000479897 OR52K1Q8NGK4 314 aa12.61□□□□□ -0.39
TRAPPC12-218ENST00000479897 FBXO25Q8TCJ0 367 aa12.61□□□□□ -0.39
TRAPPC12-218ENST00000479897 PDCD6IPQ8WUM4 868 aaKnown RBP12.61□□□□□ -0.39
TRAPPC12-218ENST00000479897 RMDN1Q96DB5 314 aa12.61□□□□□ -0.39
TRAPPC12-218ENST00000479897 SCRN2Q96FV2 425 aa12.61□□□□□ -0.39
TRAPPC12-218ENST00000479897 C19orf43Q9BQ61 176 aa12.61□□□□□ -0.39
TRAPPC12-218ENST00000479897 TRABDQ9H4I3 376 aa12.61□□□□□ -0.39
TRAPPC12-218ENST00000479897 HACD3Q9P035 362 aa12.61□□□□□ -0.39
TRAPPC12-218ENST00000479897 CACNA1IQ9P0X4 2223 aa12.61□□□□□ -0.39
TRAPPC12-218ENST00000479897 PLXNA2O75051 1894 aa12.6□□□□□ -0.39
TRAPPC12-218ENST00000479897 CCDC163A0A0D9SF12 145 aa12.6□□□□□ -0.39
TRAPPC12-218ENST00000479897 K7ESF4 209 aa12.6□□□□□ -0.39
TRAPPC12-218ENST00000479897 EIF3HO15372 352 aaKnown RBP eCLIP12.6□□□□□ -0.39
TRAPPC12-218ENST00000479897 SPINT1O43278 529 aa12.6□□□□□ -0.39
TRAPPC12-218ENST00000479897 CTIFO43310 598 aaKnown RBP12.6□□□□□ -0.39
TRAPPC12-218ENST00000479897 TUBBP07437 444 aa12.6□□□□□ -0.39
TRAPPC12-218ENST00000479897 CYP2A6P11509 494 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC12-218ENST00000479897 TIMP2P16035 220 aa12.6□□□□□ -0.39
TRAPPC12-218ENST00000479897 ZNF30P17039 623 aa12.6□□□□□ -0.39
TRAPPC12-218ENST00000479897 MCM3P25205 808 aa12.6□□□□□ -0.39
TRAPPC12-218ENST00000479897 ABL2P42684 1182 aa12.6□□□□□ -0.39
TRAPPC12-218ENST00000479897 CXCL12P48061 93 aa12.6□□□□□ -0.39
TRAPPC12-218ENST00000479897 NPY2RP49146 381 aa12.6□□□□□ -0.39
TRAPPC12-218ENST00000479897 EPHB1P54762 984 aa12.6□□□□□ -0.39
TRAPPC12-218ENST00000479897 PLTPP55058 493 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms