RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 CHRNA1P02708 482 aa24.76■■□□□ 1.55
SYNGAP1-206ENST00000479510 HOXB8P17481 243 aaPredicted RBP24.76■■□□□ 1.55
SYNGAP1-206ENST00000479510 IMPDH1P20839 514 aa24.76■■□□□ 1.55
SYNGAP1-206ENST00000479510 ACADVLP49748 655 aa24.76■■□□□ 1.55
SYNGAP1-206ENST00000479510 TUSC3Q13454 348 aa24.76■■□□□ 1.55
SYNGAP1-206ENST00000479510 HECTD2Q5U5R9 776 aa24.76■■□□□ 1.55
SYNGAP1-206ENST00000479510 GK5Q6ZS86 529 aa24.76■■□□□ 1.55
SYNGAP1-206ENST00000479510 SCD5Q86SK9 330 aa24.76■■□□□ 1.55
SYNGAP1-206ENST00000479510 SPATA2LQ8IUW3 424 aaPredicted RBP24.76■■□□□ 1.55
SYNGAP1-206ENST00000479510 L3HYPDHQ96EM0 354 aa24.76■■□□□ 1.55
SYNGAP1-206ENST00000479510 PRICKLE1Q96MT3 831 aaPredicted RBP24.76■■□□□ 1.55
SYNGAP1-206ENST00000479510 KLHL32Q96NJ5 620 aa24.76■■□□□ 1.55
SYNGAP1-206ENST00000479510 MFSD1Q9H3U5 465 aa24.76■■□□□ 1.55
SYNGAP1-206ENST00000479510 SUDS3Q9H7L9 328 aaPredicted RBP24.76■■□□□ 1.55
SYNGAP1-206ENST00000479510 UBAP1Q9NZ09 502 aa24.76■■□□□ 1.55
SYNGAP1-206ENST00000479510 ADA2Q9NZK5 511 aa24.76■■□□□ 1.55
SYNGAP1-206ENST00000479510 SFMBT1Q9UHJ3 866 aa24.76■■□□□ 1.55
SYNGAP1-206ENST00000479510 CPA4Q9UI42 421 aa24.76■■□□□ 1.55
SYNGAP1-206ENST00000479510 GLTPD2A6NH11 291 aa24.76■■□□□ 1.55
SYNGAP1-206ENST00000479510 STX16-NPEPL1H3BU86 382 aa24.76■■□□□ 1.55
SYNGAP1-206ENST00000479510 TNPO2O14787 897 aaKnown RBP24.76■■□□□ 1.55
SYNGAP1-206ENST00000479510 TRIM24O15164 1050 aa24.76■■□□□ 1.55
SYNGAP1-206ENST00000479510 CCDC166P0CW27 439 aa24.76■■□□□ 1.55
SYNGAP1-206ENST00000479510 PTPRDP23468 1912 aa24.76■■□□□ 1.55
SYNGAP1-206ENST00000479510 RGS2P41220 211 aa24.76■■□□□ 1.55
SYNGAP1-206ENST00000479510 BRCC3P46736 316 aa24.76■■□□□ 1.55
SYNGAP1-206ENST00000479510 NFKB2Q00653 900 aa24.76■■□□□ 1.55
SYNGAP1-206ENST00000479510 MYLKQ15746 1914 aa24.76■■□□□ 1.55
SYNGAP1-206ENST00000479510 FAM45BPQ6NSW5 357 aa24.76■■□□□ 1.55
SYNGAP1-206ENST00000479510 CILP2Q8IUL8 1156 aa24.76■■□□□ 1.55
SYNGAP1-206ENST00000479510 FAM45AQ8TCE6 357 aa24.76■■□□□ 1.55
SYNGAP1-206ENST00000479510 SUSD3Q96L08 255 aa24.76■■□□□ 1.55
SYNGAP1-206ENST00000479510 VWA7Q9Y334 891 aa24.76■■□□□ 1.55
SYNGAP1-206ENST00000479510 NEMP2A6NFY4 417 aa24.75■■□□□ 1.55
SYNGAP1-206ENST00000479510 MROH6A6NGR9 719 aa24.75■■□□□ 1.55
SYNGAP1-206ENST00000479510 MSI1O43347 362 aaKnown RBP24.75■■□□□ 1.55
SYNGAP1-206ENST00000479510 GPC4O75487 556 aa24.75■■□□□ 1.55
SYNGAP1-206ENST00000479510 CLPTM1O96005 669 aa24.75■■□□□ 1.55
SYNGAP1-206ENST00000479510 SNRPB2P08579 225 aaKnown RBP24.75■■□□□ 1.55
SYNGAP1-206ENST00000479510 RHDQ02161 417 aa24.75■■□□□ 1.55
SYNGAP1-206ENST00000479510 MGAT3Q09327 533 aa24.75■■□□□ 1.55
SYNGAP1-206ENST00000479510 PDAP1Q13442 181 aaKnown RBP24.75■■□□□ 1.55
SYNGAP1-206ENST00000479510 ADRM1Q16186 407 aa24.75■■□□□ 1.55
SYNGAP1-206ENST00000479510 MSANTD2Q6P1R3 559 aa24.75■■□□□ 1.55
SYNGAP1-206ENST00000479510 NOL6Q9H6R4 1146 aaKnown RBP24.75■■□□□ 1.55
SYNGAP1-206ENST00000479510 SPAG4Q9NPE6 437 aa24.75■■□□□ 1.55
SYNGAP1-206ENST00000479510 TLR6Q9Y2C9 796 aa24.75■■□□□ 1.55
SYNGAP1-206ENST00000479510 AURKAO14965 403 aa24.74■■□□□ 1.55
SYNGAP1-206ENST00000479510 RTN3O95197 1032 aaPredicted RBP24.74■■□□□ 1.55
SYNGAP1-206ENST00000479510 RHOQP17081 205 aa24.74■■□□□ 1.55
SYNGAP1-206ENST00000479510 CCL14Q16627 93 aa24.74■■□□□ 1.55
SYNGAP1-206ENST00000479510 REP15Q6BDI9 236 aa24.74■■□□□ 1.55
SYNGAP1-206ENST00000479510 SERINC5Q86VE9 423 aa24.74■■□□□ 1.55
SYNGAP1-206ENST00000479510 RNF148Q8N7C7 305 aa24.74■■□□□ 1.55
SYNGAP1-206ENST00000479510 DDI1Q8WTU0 396 aa24.74■■□□□ 1.55
SYNGAP1-206ENST00000479510 ASB2Q96Q27 587 aa24.74■■□□□ 1.55
SYNGAP1-206ENST00000479510 ATXN3LQ9H3M9 355 aa24.74■■□□□ 1.55
SYNGAP1-206ENST00000479510 NYNRINQ9P2P1 1898 aaKnown RBP24.74■■□□□ 1.55
SYNGAP1-206ENST00000479510 DUSP11O75319 330 aaKnown RBP24.74■■□□□ 1.55
SYNGAP1-206ENST00000479510 AKR1A1P14550 325 aa24.74■■□□□ 1.55
SYNGAP1-206ENST00000479510 KCNA5P22460 613 aa24.74■■□□□ 1.55
SYNGAP1-206ENST00000479510 MSX2P35548 267 aaPredicted RBP24.74■■□□□ 1.55
SYNGAP1-206ENST00000479510 LAMB3Q13751 1172 aa24.74■■□□□ 1.55
SYNGAP1-206ENST00000479510 C14orf80Q86SX3 495 aa24.74■■□□□ 1.55
SYNGAP1-206ENST00000479510 SATL1Q86VE3 508 aa24.74■■□□□ 1.55
SYNGAP1-206ENST00000479510 OR13J1Q8NGT2 312 aa24.74■■□□□ 1.55
SYNGAP1-206ENST00000479510 HMGCLL1Q8TB92 370 aa24.74■■□□□ 1.55
SYNGAP1-206ENST00000479510 PEX13Q92968 403 aa24.74■■□□□ 1.55
SYNGAP1-206ENST00000479510 NDNQ99608 321 aa24.74■■□□□ 1.55
SYNGAP1-206ENST00000479510 GSTO2Q9H4Y5 243 aa24.74■■□□□ 1.55
SYNGAP1-206ENST00000479510 TRAF6Q9Y4K3 522 aa24.74■■□□□ 1.55
SYNGAP1-206ENST00000479510 AP4S1Q9Y587 144 aa24.74■■□□□ 1.55
SYNGAP1-206ENST00000479510 E7ENX8 843 aa24.73■■□□□ 1.55
SYNGAP1-206ENST00000479510 FAM58BPP0C7Q3 252 aa24.73■■□□□ 1.55
SYNGAP1-206ENST00000479510 GRIK1P39086 918 aa24.73■■□□□ 1.55
SYNGAP1-206ENST00000479510 C1QTNF8P60827 252 aa24.73■■□□□ 1.55
SYNGAP1-206ENST00000479510 PCSK7Q16549 785 aa24.73■■□□□ 1.55
SYNGAP1-206ENST00000479510 AGKQ53H12 422 aa24.73■■□□□ 1.55
SYNGAP1-206ENST00000479510 SAMD4BQ5PRF9 694 aaKnown RBP24.73■■□□□ 1.55
SYNGAP1-206ENST00000479510 ALDH16A1Q8IZ83 802 aa24.73■■□□□ 1.55
SYNGAP1-206ENST00000479510 TEX26Q8N6G2 289 aa24.73■■□□□ 1.55
SYNGAP1-206ENST00000479510 TADA1Q96BN2 335 aa24.73■■□□□ 1.55
SYNGAP1-206ENST00000479510 DTNBP1Q96EV8 351 aa24.73■■□□□ 1.55
SYNGAP1-206ENST00000479510 SLC39A13Q96H72 371 aa24.73■■□□□ 1.55
SYNGAP1-206ENST00000479510 TMEM209Q96SK2 561 aa24.73■■□□□ 1.55
SYNGAP1-206ENST00000479510 SLC2A11Q9BYW1 496 aa24.73■■□□□ 1.55
SYNGAP1-206ENST00000479510 UNKQ9C0B0 810 aaKnown RBP24.73■■□□□ 1.55
SYNGAP1-206ENST00000479510 CYP4F12Q9HCS2 524 aa24.73■■□□□ 1.55
SYNGAP1-206ENST00000479510 PRDM5Q9NQX1 630 aaPredicted RBP24.73■■□□□ 1.55
SYNGAP1-206ENST00000479510 LZTS1Q9Y250 596 aa24.73■■□□□ 1.55
SYNGAP1-206ENST00000479510 NLRC5Q86WI3 1866 aa24.73■■□□□ 1.55
SYNGAP1-206ENST00000479510 FBP2O00757 339 aa24.73■■□□□ 1.55
SYNGAP1-206ENST00000479510 RNASEH2AO75792 299 aaKnown RBP24.73■■□□□ 1.55
SYNGAP1-206ENST00000479510 MAP7Q14244 749 aa24.73■■□□□ 1.55
SYNGAP1-206ENST00000479510 MARC1Q5VT66 337 aa24.73■■□□□ 1.55
SYNGAP1-206ENST00000479510 C8orf82Q6P1X6 216 aaPredicted RBP24.73■■□□□ 1.55
SYNGAP1-206ENST00000479510 UHRF1Q96T88 793 aaPredicted RBP24.73■■□□□ 1.55
SYNGAP1-206ENST00000479510 SPON1Q9HCB6 807 aa24.73■■□□□ 1.55
SYNGAP1-206ENST00000479510 TMEM248Q9NWD8 314 aa24.73■■□□□ 1.55
SYNGAP1-206ENST00000479510 MPP6Q9NZW5 540 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms